RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 LRRC59Q96AG4 307 aaKnown RBP8.7□□□□□ -1.02
COL6A4P1-202ENST00000487147 POLR3EQ9NVU0 708 aa8.7□□□□□ -1.02
COL6A4P1-202ENST00000487147 CDC23Q9UJX2 597 aa8.7□□□□□ -1.02
COL6A4P1-202ENST00000487147 PHF8Q9UPP1 1060 aa8.7□□□□□ -1.02
COL6A4P1-202ENST00000487147 FAN1Q9Y2M0 1017 aa8.7□□□□□ -1.02
COL6A4P1-202ENST00000487147 HSF2BPO75031 334 aa8.7□□□□□ -1.02
COL6A4P1-202ENST00000487147 SASH1O94885 1247 aa8.7□□□□□ -1.02
COL6A4P1-202ENST00000487147 POSTNQ15063 836 aa8.7□□□□□ -1.02
COL6A4P1-202ENST00000487147 KRT40Q6A162 431 aa8.7□□□□□ -1.02
COL6A4P1-202ENST00000487147 OTUD6BQ8N6M0 293 aa8.7□□□□□ -1.02
COL6A4P1-202ENST00000487147 PCDHA5Q9Y5H7 936 aa8.7□□□□□ -1.02
COL6A4P1-202ENST00000487147 CARMIL3Q8ND23 1372 aa8.7□□□□□ -1.02
COL6A4P1-202ENST00000487147 NRXN1Q9ULB1 1477 aa8.7□□□□□ -1.02
COL6A4P1-202ENST00000487147 KRT86O43790 486 aa8.7□□□□□ -1.02
COL6A4P1-202ENST00000487147 OPA1O60313 960 aa8.7□□□□□ -1.02
COL6A4P1-202ENST00000487147 TADA3O75528 432 aa8.7□□□□□ -1.02
COL6A4P1-202ENST00000487147 CLSTN1O94985 981 aa8.7□□□□□ -1.02
COL6A4P1-202ENST00000487147 CYLC1P35663 651 aaPredicted RBP8.7□□□□□ -1.02
COL6A4P1-202ENST00000487147 VSTM4Q8IW00 320 aa8.7□□□□□ -1.02
COL6A4P1-202ENST00000487147 PSMD1Q99460 953 aa8.7□□□□□ -1.02
COL6A4P1-202ENST00000487147 CWC25Q9NXE8 425 aaPredicted RBP8.7□□□□□ -1.02
COL6A4P1-202ENST00000487147 RNMTO43148 476 aaKnown RBP8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 TRIM21P19474 475 aaKnown RBP8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 DNA2P51530 1060 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 FMR1NBQ8N0W7 255 aaPredicted RBP8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 FAM71BQ8TC56 605 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 NAA15Q9BXJ9 866 aaKnown RBP8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 RABEP2Q9H5N1 569 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 DBNLQ9UJU6 430 aaKnown RBP8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 IGSF1Q8N6C5 1336 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 GOLGA6CA6NDK9 693 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 SNRPA1P09661 255 aaKnown RBP8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 GOLGA6DP0CG33 693 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 ST5P78524 1137 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 GCKRQ14397 625 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 ZNF827Q17R98 1081 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 CCDC122Q5T0U0 273 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 TMTC1Q8IUR5 882 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 GDAP1L1Q96MZ0 367 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 TANGO6Q9C0B7 1094 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 ZBTB3Q9H5J0 574 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 L2HGDHQ9H9P8 463 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 GOLGA6AQ9NYA3 693 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 FEZ2Q9UHY8 353 aaPredicted RBP8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 MTMR7Q9Y216 660 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 ERLIN2O94905 339 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 HSPD1P10809 573 aaKnown RBP8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 H2AFXP16104 143 aaPredicted RBP8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 ZC3H6P61129 1189 aaKnown RBP8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 KRT83P78385 493 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 FKBP15Q5T1M5 1219 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 PHKBQ93100 1093 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 MED4Q9NPJ6 270 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 JRKLQ9Y4A0 524 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 KDRP35968 1356 aa8.69□□□□□ -1.02
COL6A4P1-202ENST00000487147 GOLGA6L7A0A1B0GV03 622 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 TRIM75PA6NK02 468 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 ZEB2O60315 1214 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 IFIT5Q13325 482 aaKnown RBP8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 SLC39A14Q15043 492 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 RBM43Q6ZSC3 357 aaKnown RBP8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 CLIC6Q96NY7 704 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 VPS16Q9H269 839 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 ANGEL1Q9UNK9 670 aaKnown RBP8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 ADGRB1O14514 1584 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 INPP5BP32019 993 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 EPS15P42566 896 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 PLA2G4AP47712 749 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 UBXN1Q04323 297 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 RTN1Q16799 776 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 WHAMMP3Q1A5X7 153 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 LONRF3Q496Y0 759 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 CT47A1Q5JQC4 288 aaPredicted RBP8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 CYP26C1Q6V0L0 522 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 KIF6Q6ZMV9 814 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 SLF1Q9BQI6 1058 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 METTL22Q9BUU2 404 aaPredicted RBP8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 FAM204AQ9H8W3 233 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 LUC7L2Q9Y383 392 aaKnown RBP8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 FHOD1Q9Y613 1164 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 MINDY4BA8MYZ0 360 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 KRT9P35527 623 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 MTIF2P46199 727 aaKnown RBP8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 KCNJ6P48051 423 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 RILPL1Q5EBL4 403 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 ATRIPQ8WXE1 791 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 ALS2CR12Q96Q35 445 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 HAUS7Q99871 368 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 ZCCHC11Q5TAX3 1644 aaKnown RBP8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 KIF5AQ12840 1032 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 CCDC96Q2M329 555 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 SLC9C2Q5TAH2 1124 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 MFSD6Q6ZSS7 791 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 THEMISQ8N1K5 641 aaPredicted RBP8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 TRIM47Q96LD4 638 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 BPIFA3Q9BQP9 254 aa8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 ALDH8A1Q9H2A2 487 aaPredicted RBP8.68□□□□□ -1.02
COL6A4P1-202ENST00000487147 SYNRGQ9UMZ2 1314 aa8.67□□□□□ -1.02
COL6A4P1-202ENST00000487147 NDUFAB1O14561 156 aa8.67□□□□□ -1.02
COL6A4P1-202ENST00000487147 TRIM66O15016 1216 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms