RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 MYH8P13535 1937 aa12.52□□□□□ -0.41
NEK4-204ENST00000487068 IFIT2P09913 472 aaKnown RBP12.51□□□□□ -0.41
NEK4-204ENST00000487068 ARID4AP29374 1257 aaPredicted RBP12.51□□□□□ -0.41
NEK4-204ENST00000487068 TNNI2P48788 182 aa12.51□□□□□ -0.41
NEK4-204ENST00000487068 PRKG1Q13976 671 aa12.51□□□□□ -0.41
NEK4-204ENST00000487068 DIXDC1Q155Q3 683 aa12.51□□□□□ -0.41
NEK4-204ENST00000487068 SPTY2D1Q68D10 685 aaPredicted RBP12.51□□□□□ -0.41
NEK4-204ENST00000487068 SIRT2Q8IXJ6 389 aa12.51□□□□□ -0.41
NEK4-204ENST00000487068 SNRKQ9NRH2 765 aa12.51□□□□□ -0.41
NEK4-204ENST00000487068 RAI14Q9P0K7 980 aa12.51□□□□□ -0.41
NEK4-204ENST00000487068 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.51□□□□□ -0.41
NEK4-204ENST00000487068 ZNF70Q9UC06 446 aaPredicted RBP12.51□□□□□ -0.41
NEK4-204ENST00000487068 DBNLQ9UJU6 430 aaKnown RBP12.51□□□□□ -0.41
NEK4-204ENST00000487068 PDS5AQ29RF7 1337 aaKnown RBP12.51□□□□□ -0.41
NEK4-204ENST00000487068 SALL1Q9NSC2 1324 aa12.51□□□□□ -0.41
NEK4-204ENST00000487068 ATAD5Q96QE3 1844 aa12.51□□□□□ -0.41
NEK4-204ENST00000487068 NAV1Q8NEY1 1877 aa12.51□□□□□ -0.41
NEK4-204ENST00000487068 TCP10L2B9ZVM9 353 aa12.5□□□□□ -0.41
NEK4-204ENST00000487068 RAB11FIP3O75154 756 aa12.5□□□□□ -0.41
NEK4-204ENST00000487068 MCAMP43121 646 aa12.5□□□□□ -0.41
NEK4-204ENST00000487068 HDLBPQ00341 1268 aaKnown RBP12.5□□□□□ -0.41
NEK4-204ENST00000487068 DGKZQ13574 1117 aa12.5□□□□□ -0.41
NEK4-204ENST00000487068 SPDYE2Q495Y8 402 aa12.5□□□□□ -0.41
NEK4-204ENST00000487068 ERICH6Q7L0X2 663 aa12.5□□□□□ -0.41
NEK4-204ENST00000487068 SLF2Q8IX21 1173 aa12.5□□□□□ -0.41
NEK4-204ENST00000487068 ZBED3Q96IU2 234 aaPredicted RBP12.5□□□□□ -0.41
NEK4-204ENST00000487068 DEFB129Q9H1M3 183 aa12.5□□□□□ -0.41
NEK4-204ENST00000487068 HMG20BQ9P0W2 317 aa12.5□□□□□ -0.41
NEK4-204ENST00000487068 LRP2BPQ9P2M1 347 aa12.5□□□□□ -0.41
NEK4-204ENST00000487068 PPP2R3BQ9Y5P8 575 aa12.5□□□□□ -0.41
NEK4-204ENST00000487068 AOX1Q06278 1338 aa12.5□□□□□ -0.41
NEK4-204ENST00000487068 CACNB3P54284 484 aa12.49□□□□□ -0.41
NEK4-204ENST00000487068 NOGQ13253 232 aa12.49□□□□□ -0.41
NEK4-204ENST00000487068 EAF2Q96CJ1 260 aaPredicted RBP12.49□□□□□ -0.41
NEK4-204ENST00000487068 ZDHHC15Q96MV8 337 aa12.49□□□□□ -0.41
NEK4-204ENST00000487068 LRRCC1Q9C099 1032 aa12.49□□□□□ -0.41
NEK4-204ENST00000487068 DAGLAQ9Y4D2 1042 aa12.49□□□□□ -0.41
NEK4-204ENST00000487068 SUPT16HQ9Y5B9 1047 aaKnown RBP12.49□□□□□ -0.41
NEK4-204ENST00000487068 RASA3Q14644 834 aa12.48□□□□□ -0.41
NEK4-204ENST00000487068 HHIPL2Q6UWX4 724 aa12.48□□□□□ -0.41
NEK4-204ENST00000487068 TBC1D9Q6ZT07 1266 aa12.48□□□□□ -0.41
NEK4-204ENST00000487068 ARMC9Q7Z3E5 817 aa12.48□□□□□ -0.41
NEK4-204ENST00000487068 NOL10Q9BSC4 688 aaKnown RBP12.48□□□□□ -0.41
NEK4-204ENST00000487068 ZBTB47Q9UFB7 747 aaPredicted RBP12.48□□□□□ -0.41
NEK4-204ENST00000487068 LAMB1P07942 1786 aa12.48□□□□□ -0.41
NEK4-204ENST00000487068 MROH7-TTC4A0A0A0MT08 1334 aa12.47□□□□□ -0.41
NEK4-204ENST00000487068 ZAP70P43403 619 aa12.47□□□□□ -0.41
NEK4-204ENST00000487068 ZNF157P51786 506 aaPredicted RBP12.47□□□□□ -0.41
NEK4-204ENST00000487068 FKBP1BP68106 108 aa12.47□□□□□ -0.41
NEK4-204ENST00000487068 GSTO1P78417 241 aa12.47□□□□□ -0.41
NEK4-204ENST00000487068 MOB2Q70IA6 237 aa12.47□□□□□ -0.41
NEK4-204ENST00000487068 ANGEL1Q9UNK9 670 aaKnown RBP12.47□□□□□ -0.41
NEK4-204ENST00000487068 SSC5DA1L4H1 1573 aa12.47□□□□□ -0.41
NEK4-204ENST00000487068 DOCK1Q14185 1865 aa12.46□□□□□ -0.41
NEK4-204ENST00000487068 PPP1R12BO60237 982 aaPredicted RBP12.46□□□□□ -0.41
NEK4-204ENST00000487068 SMARCA5O60264 1052 aaPredicted RBP12.46□□□□□ -0.41
NEK4-204ENST00000487068 BTDP43251 543 aa12.46□□□□□ -0.41
NEK4-204ENST00000487068 MECOMQ03112 1051 aa12.46□□□□□ -0.41
NEK4-204ENST00000487068 SUPT20HL1Q3ZLR7 823 aa12.46□□□□□ -0.41
NEK4-204ENST00000487068 RGMBQ6NW40 437 aa12.46□□□□□ -0.41
NEK4-204ENST00000487068 DNAJC2Q99543 621 aaKnown RBP12.46□□□□□ -0.41
NEK4-204ENST00000487068 TMEM39BQ9GZU3 492 aa12.46□□□□□ -0.41
NEK4-204ENST00000487068 FZD1Q9UP38 647 aa12.46□□□□□ -0.41
NEK4-204ENST00000487068 NDUFB9Q9Y6M9 179 aa12.46□□□□□ -0.41
NEK4-204ENST00000487068 BAZ2AQ9UIF9 1905 aaKnown RBP12.46□□□□□ -0.42
NEK4-204ENST00000487068 UBE2Q2LH0YL09 131 aa12.45□□□□□ -0.42
NEK4-204ENST00000487068 IDH1O75874 414 aaKnown RBP12.45□□□□□ -0.42
NEK4-204ENST00000487068 LDHCP07864 332 aa12.45□□□□□ -0.42
NEK4-204ENST00000487068 TCP10Q12799 353 aa12.45□□□□□ -0.42
NEK4-204ENST00000487068 PICALMQ13492 652 aa12.45□□□□□ -0.42
NEK4-204ENST00000487068 NBPF12Q5TAG4 269 aaPredicted RBP12.45□□□□□ -0.42
NEK4-204ENST00000487068 NAA16Q6N069 864 aaPredicted RBP12.45□□□□□ -0.42
NEK4-204ENST00000487068 APOBEC3HQ6NTF7 200 aaKnown RBP12.45□□□□□ -0.42
NEK4-204ENST00000487068 CDC42EP5Q6NZY7 148 aa12.45□□□□□ -0.42
NEK4-204ENST00000487068 ZSCAN29Q8IWY8 852 aaPredicted RBP12.45□□□□□ -0.42
NEK4-204ENST00000487068 GPATCH3Q96I76 525 aa12.45□□□□□ -0.42
NEK4-204ENST00000487068 MRIQ9BWK5 157 aa12.45□□□□□ -0.42
NEK4-204ENST00000487068 USP40Q9NVE5 1235 aa12.45□□□□□ -0.42
NEK4-204ENST00000487068 PCDHB15Q9Y5E8 787 aa12.45□□□□□ -0.42
NEK4-204ENST00000487068 GAKO14976 1311 aa12.44□□□□□ -0.42
NEK4-204ENST00000487068 CYP2E1P05181 493 aaPredicted RBP12.44□□□□□ -0.42
NEK4-204ENST00000487068 IREB2P48200 963 aaKnown RBP12.44□□□□□ -0.42
NEK4-204ENST00000487068 IRX6P78412 446 aaPredicted RBP12.44□□□□□ -0.42
NEK4-204ENST00000487068 NSUN4Q96CB9 384 aaKnown RBP12.44□□□□□ -0.42
NEK4-204ENST00000487068 ZNF512BQ96KM6 892 aaPredicted RBP12.44□□□□□ -0.42
NEK4-204ENST00000487068 ZIC5Q96T25 663 aa12.44□□□□□ -0.42
NEK4-204ENST00000487068 RPAP1Q9BWH6 1393 aaPredicted RBP12.43□□□□□ -0.42
NEK4-204ENST00000487068 MKRN3Q13064 507 aaKnown RBP12.43□□□□□ -0.42
NEK4-204ENST00000487068 CDAN1Q8IWY9 1227 aa12.43□□□□□ -0.42
NEK4-204ENST00000487068 EXOC6Q8TAG9 804 aa12.43□□□□□ -0.42
NEK4-204ENST00000487068 CCDC102AQ96A19 550 aa12.43□□□□□ -0.42
NEK4-204ENST00000487068 HOOK2Q96ED9 719 aa12.43□□□□□ -0.42
NEK4-204ENST00000487068 DCTPP1Q9H773 170 aa12.43□□□□□ -0.42
NEK4-204ENST00000487068 PIH1D3Q9NQM4 214 aaKnown RBP12.43□□□□□ -0.42
NEK4-204ENST00000487068 SAGE1Q9NXZ1 904 aa12.43□□□□□ -0.42
NEK4-204ENST00000487068 SIPA1L1O43166 1804 aa12.42□□□□□ -0.42
NEK4-204ENST00000487068 GOLIM4O00461 696 aa12.42□□□□□ -0.42
NEK4-204ENST00000487068 SLC10A3P09131 477 aa12.42□□□□□ -0.42
NEK4-204ENST00000487068 RGS3P49796 1198 aa12.42□□□□□ -0.42
NEK4-204ENST00000487068 MAP3K12Q12852 859 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms