RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 RC3H2Q9HBD1 1191 aaKnown RBP6.71□□□□□ -1.34
SNRNP27-204ENST00000487029 ZFYVE28Q9HCC9 887 aa6.71□□□□□ -1.34
SNRNP27-204ENST00000487029 RAD18Q9NS91 495 aa6.71□□□□□ -1.34
SNRNP27-204ENST00000487029 A0A1W2PP55 124 aa6.7□□□□□ -1.34
SNRNP27-204ENST00000487029 CDK5R2Q13319 367 aa6.7□□□□□ -1.34
SNRNP27-204ENST00000487029 STK11IPQ8N1F8 1099 aa6.7□□□□□ -1.34
SNRNP27-204ENST00000487029 LRRN4CLQ8ND94 238 aa6.7□□□□□ -1.34
SNRNP27-204ENST00000487029 FZD6O60353 706 aa6.69□□□□□ -1.34
SNRNP27-204ENST00000487029 AOC2O75106 756 aa6.69□□□□□ -1.34
SNRNP27-204ENST00000487029 MESP2Q0VG99 397 aa6.69□□□□□ -1.34
SNRNP27-204ENST00000487029 CILP2Q8IUL8 1156 aa6.69□□□□□ -1.34
SNRNP27-204ENST00000487029 WDR18Q9BV38 432 aa6.69□□□□□ -1.34
SNRNP27-204ENST00000487029 KRTAP17-1Q9BYP8 105 aa6.69□□□□□ -1.34
SNRNP27-204ENST00000487029 KRTAP4-5Q9BYR2 181 aa6.69□□□□□ -1.34
SNRNP27-204ENST00000487029 FAM87AP0C7U9 286 aa6.68□□□□□ -1.34
SNRNP27-204ENST00000487029 KSR1Q8IVT5 923 aa6.68□□□□□ -1.34
SNRNP27-204ENST00000487029 NETO1Q8TDF5 533 aa6.68□□□□□ -1.34
SNRNP27-204ENST00000487029 TMEM40Q8WWA1 233 aa6.68□□□□□ -1.34
SNRNP27-204ENST00000487029 MISP3Q96FF7 219 aa6.68□□□□□ -1.34
SNRNP27-204ENST00000487029 WDR89Q96FK6 387 aaPredicted RBP6.68□□□□□ -1.34
SNRNP27-204ENST00000487029 CCDC87Q9NVE4 849 aa6.68□□□□□ -1.34
SNRNP27-204ENST00000487029 NPR3P17342 541 aa6.67□□□□□ -1.34
SNRNP27-204ENST00000487029 AAMPQ13685 434 aa6.67□□□□□ -1.34
SNRNP27-204ENST00000487029 CYP27C1Q4G0S4 372 aa6.67□□□□□ -1.34
SNRNP27-204ENST00000487029 CORO1BQ9BR76 489 aa6.67□□□□□ -1.34
SNRNP27-204ENST00000487029 LIN7BQ9HAP6 207 aa6.67□□□□□ -1.34
SNRNP27-204ENST00000487029 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.67□□□□□ -1.342e-6■■■□□ 16.5
SNRNP27-204ENST00000487029 EIF4EBP3O60516 100 aaPredicted RBP6.66□□□□□ -1.34
SNRNP27-204ENST00000487029 B3GALT4O96024 378 aa6.66□□□□□ -1.34
SNRNP27-204ENST00000487029 PKN1Q16512 942 aa6.66□□□□□ -1.34
SNRNP27-204ENST00000487029 ALKBH2Q6NS38 261 aa6.66□□□□□ -1.34
SNRNP27-204ENST00000487029 GJD3Q8N144 294 aa6.66□□□□□ -1.34
SNRNP27-204ENST00000487029 CCER1Q8TC90 406 aaPredicted RBP6.66□□□□□ -1.34
SNRNP27-204ENST00000487029 TMPRSS2O15393 492 aa6.65□□□□□ -1.34
SNRNP27-204ENST00000487029 LEFTY1O75610 366 aa6.65□□□□□ -1.34
SNRNP27-204ENST00000487029 ZNF865P0CJ78 1059 aaPredicted RBP6.65□□□□□ -1.34
SNRNP27-204ENST00000487029 EHHADHQ08426 723 aa6.65□□□□□ -1.34
SNRNP27-204ENST00000487029 USPL1Q5W0Q7 1092 aa6.65□□□□□ -1.34
SNRNP27-204ENST00000487029 GALNT12Q8IXK2 581 aa6.65□□□□□ -1.34
SNRNP27-204ENST00000487029 PI4K2BQ8TCG2 481 aa6.65□□□□□ -1.34
SNRNP27-204ENST00000487029 PBXIP1Q96AQ6 731 aa6.65□□□□□ -1.34
SNRNP27-204ENST00000487029 VAV3Q9UKW4 847 aa6.65□□□□□ -1.34
SNRNP27-204ENST00000487029 PLAGL2Q9UPG8 496 aa6.65□□□□□ -1.34
SNRNP27-204ENST00000487029 LIG1P18858 919 aa6.64□□□□□ -1.35
SNRNP27-204ENST00000487029 PRKCQQ04759 706 aa6.64□□□□□ -1.35
SNRNP27-204ENST00000487029 PDE3AQ14432 1141 aa6.64□□□□□ -1.35
SNRNP27-204ENST00000487029 AOC3Q16853 763 aa6.64□□□□□ -1.35
SNRNP27-204ENST00000487029 HP1BP3Q5SSJ5 553 aaPredicted RBP6.64□□□□□ -1.35
SNRNP27-204ENST00000487029 ZNF576Q9H609 170 aa6.64□□□□□ -1.35
SNRNP27-204ENST00000487029 PRDM7Q9NQW5 492 aa6.64□□□□□ -1.35
SNRNP27-204ENST00000487029 CRIM1Q9NZV1 1036 aa6.64□□□□□ -1.35
SNRNP27-204ENST00000487029 ZNF503-AS2A6NEH8 195 aa6.63□□□□□ -1.35
SNRNP27-204ENST00000487029 USP5P45974 858 aa6.63□□□□□ -1.35
SNRNP27-204ENST00000487029 FANCD2OSQ96PS1 177 aa6.63□□□□□ -1.35
SNRNP27-204ENST00000487029 CCDC86Q9H6F5 360 aaKnown RBP6.63□□□□□ -1.35
SNRNP27-204ENST00000487029 ZFYVE1Q9HBF4 777 aa6.63□□□□□ -1.35
SNRNP27-204ENST00000487029 SYNGAP1Q96PV0 1343 aa6.62□□□□□ -1.35
SNRNP27-204ENST00000487029 OXCT1P55809 520 aa6.62□□□□□ -1.35
SNRNP27-204ENST00000487029 FAM84AQ96KN4 292 aa6.62□□□□□ -1.35
SNRNP27-204ENST00000487029 SLC38A3Q99624 504 aa6.62□□□□□ -1.35
SNRNP27-204ENST00000487029 ZC3H12CQ9C0D7 883 aaKnown RBP6.62□□□□□ -1.35
SNRNP27-204ENST00000487029 DISC1Q9NRI5 854 aa6.62□□□□□ -1.35
SNRNP27-204ENST00000487029 LRRC10BA6NIK2 292 aa6.61□□□□□ -1.35
SNRNP27-204ENST00000487029 ZNF862O60290 1169 aa6.61□□□□□ -1.35
SNRNP27-204ENST00000487029 FAM13AO94988 1023 aa6.61□□□□□ -1.35
SNRNP27-204ENST00000487029 CFPP27918 469 aa6.61□□□□□ -1.35
SNRNP27-204ENST00000487029 SSFA2P28290 1259 aa6.61□□□□□ -1.35
SNRNP27-204ENST00000487029 IFI16Q16666 785 aaKnown RBP6.61□□□□□ -1.35
SNRNP27-204ENST00000487029 C1QL4Q86Z23 238 aa6.61□□□□□ -1.35
SNRNP27-204ENST00000487029 PCDHGC5Q9Y5F6 944 aa6.61□□□□□ -1.35
SNRNP27-204ENST00000487029 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.6□□□□□ -1.35
SNRNP27-204ENST00000487029 ITPKAP23677 461 aa6.6□□□□□ -1.35
SNRNP27-204ENST00000487029 LCE5AQ5TCM9 118 aa6.6□□□□□ -1.35
SNRNP27-204ENST00000487029 SMYD4Q8IYR2 804 aaPredicted RBP6.6□□□□□ -1.35
SNRNP27-204ENST00000487029 HRASLS5Q96KN8 279 aa6.6□□□□□ -1.35
SNRNP27-204ENST00000487029 DUSP23Q9BVJ7 150 aa6.6□□□□□ -1.35
SNRNP27-204ENST00000487029 ANO2Q9NQ90 1003 aa6.6□□□□□ -1.35
SNRNP27-204ENST00000487029 PPP1R15AO75807 674 aaPredicted RBP6.59□□□□□ -1.35
SNRNP27-204ENST00000487029 CEACAM5P06731 702 aa6.59□□□□□ -1.35
SNRNP27-204ENST00000487029 ZNF157P51786 506 aaPredicted RBP6.59□□□□□ -1.35
SNRNP27-204ENST00000487029 TTLL4Q14679 1199 aa6.59□□□□□ -1.35
SNRNP27-204ENST00000487029 MLANAQ16655 118 aa6.59□□□□□ -1.35
SNRNP27-204ENST00000487029 KIAA0319Q5VV43 1072 aa6.59□□□□□ -1.35
SNRNP27-204ENST00000487029 LCNL1Q6ZST4 164 aa6.59□□□□□ -1.35
SNRNP27-204ENST00000487029 FLAD1Q8NFF5 587 aa6.59□□□□□ -1.35
SNRNP27-204ENST00000487029 TMEM88BA6NKF7 163 aa6.58□□□□□ -1.36
SNRNP27-204ENST00000487029 HCLS1P14317 486 aaPredicted RBP6.58□□□□□ -1.36
SNRNP27-204ENST00000487029 ID3Q02535 119 aa6.58□□□□□ -1.36
SNRNP27-204ENST00000487029 FAAP100Q0VG06 881 aa6.58□□□□□ -1.36
SNRNP27-204ENST00000487029 AP3B2Q13367 1082 aa6.58□□□□□ -1.36
SNRNP27-204ENST00000487029 KRTAP19-4Q3LI73 84 aa6.58□□□□□ -1.36
SNRNP27-204ENST00000487029 PHLDB3Q6NSJ2 640 aa6.58□□□□□ -1.36
SNRNP27-204ENST00000487029 SLC23A3Q6PIS1 610 aa6.58□□□□□ -1.36
SNRNP27-204ENST00000487029 ZSWIM9Q86XI8 627 aa6.58□□□□□ -1.36
SNRNP27-204ENST00000487029 DDX54Q8TDD1 881 aaKnown RBP6.58□□□□□ -1.36
SNRNP27-204ENST00000487029 LIN37Q96GY3 246 aaPredicted RBP6.58□□□□□ -1.36
SNRNP27-204ENST00000487029 HEXIM2Q96MH2 286 aaKnown RBP6.58□□□□□ -1.36
SNRNP27-204ENST00000487029 PIDD1Q9HB75 910 aa6.58□□□□□ -1.36
SNRNP27-204ENST00000487029 MKNK2Q9HBH9 465 aa6.58□□□□□ -1.36
SNRNP27-204ENST00000487029 NEFMP07197 916 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms