RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 EXOC6Q8TAG9 804 aa15.9■□□□□ 0.14
SSR4-211ENST00000486204 RBM27Q9P2N5 1060 aaKnown RBP15.9■□□□□ 0.14
SSR4-211ENST00000486204 KIAA0100Q14667 2235 aaKnown RBP15.89■□□□□ 0.13
SSR4-211ENST00000486204 HSP90AB4PQ58FF6 505 aa15.89■□□□□ 0.13
SSR4-211ENST00000486204 ERC1Q8IUD2 1116 aa15.89■□□□□ 0.13
SSR4-211ENST00000486204 OGFOD1Q8N543 542 aa15.89■□□□□ 0.13
SSR4-211ENST00000486204 RHPN1Q8TCX5 695 aa15.89■□□□□ 0.13
SSR4-211ENST00000486204 EAF2Q96CJ1 260 aaPredicted RBP15.89■□□□□ 0.13
SSR4-211ENST00000486204 ZBTB48P10074 688 aaPredicted RBP15.88■□□□□ 0.13
SSR4-211ENST00000486204 CRHR2Q13324 411 aa15.88■□□□□ 0.13
SSR4-211ENST00000486204 GRIK5Q16478 980 aa15.88■□□□□ 0.13
SSR4-211ENST00000486204 SLC9C1Q4G0N8 1177 aa15.88■□□□□ 0.13
SSR4-211ENST00000486204 OTUD7BQ6GQQ9 843 aa15.88■□□□□ 0.13
SSR4-211ENST00000486204 KIAA0825Q8IV33 1275 aa15.88■□□□□ 0.13
SSR4-211ENST00000486204 WNK4Q96J92 1243 aa15.88■□□□□ 0.13
SSR4-211ENST00000486204 NEUROD6Q96NK8 337 aa15.88■□□□□ 0.13
SSR4-211ENST00000486204 DBNDD2Q9BQY9 259 aa15.88■□□□□ 0.13
SSR4-211ENST00000486204 TLR7Q9NYK1 1049 aaKnown RBP15.88■□□□□ 0.13
SSR4-211ENST00000486204 DBNLQ9UJU6 430 aaKnown RBP15.88■□□□□ 0.13
SSR4-211ENST00000486204 FZD1Q9UP38 647 aa15.88■□□□□ 0.13
SSR4-211ENST00000486204 FOCADQ5VW36 1801 aa15.87■□□□□ 0.13
SSR4-211ENST00000486204 SEMA3EO15041 775 aa15.87■□□□□ 0.13
SSR4-211ENST00000486204 ARID4AP29374 1257 aaPredicted RBP15.87■□□□□ 0.13
SSR4-211ENST00000486204 CAP1Q01518 475 aa15.87■□□□□ 0.13
SSR4-211ENST00000486204 CHAF1AQ13111 956 aaPredicted RBP15.87■□□□□ 0.13
SSR4-211ENST00000486204 AAMPQ13685 434 aa15.87■□□□□ 0.13
SSR4-211ENST00000486204 RASGRF1Q13972 1273 aa15.87■□□□□ 0.13
SSR4-211ENST00000486204 MFSD14BQ5SR56 506 aa15.87■□□□□ 0.13
SSR4-211ENST00000486204 KIF1BPQ96EK5 621 aa15.87■□□□□ 0.13
SSR4-211ENST00000486204 IL1RAPL2Q9NP60 686 aa15.87■□□□□ 0.13
SSR4-211ENST00000486204 PDS5AQ29RF7 1337 aaKnown RBP15.87■□□□□ 0.13
SSR4-211ENST00000486204 RAB11FIP3O75154 756 aa15.86■□□□□ 0.13
SSR4-211ENST00000486204 MYCP01106 439 aaPredicted RBP15.86■□□□□ 0.13
SSR4-211ENST00000486204 APOBEC3FQ8IUX4 373 aaKnown RBP15.86■□□□□ 0.13
SSR4-211ENST00000486204 DPF3Q92784 378 aa15.86■□□□□ 0.13
SSR4-211ENST00000486204 DCTPP1Q9H773 170 aa15.86■□□□□ 0.13
SSR4-211ENST00000486204 SALL1Q9NSC2 1324 aa15.86■□□□□ 0.13
SSR4-211ENST00000486204 APBB1O00213 710 aa15.85■□□□□ 0.13
SSR4-211ENST00000486204 FRAT2O75474 233 aaPredicted RBP15.85■□□□□ 0.13
SSR4-211ENST00000486204 IRX6P78412 446 aaPredicted RBP15.85■□□□□ 0.13
SSR4-211ENST00000486204 ARHGEF6Q15052 776 aa15.85■□□□□ 0.13
SSR4-211ENST00000486204 TBC1D22AQ8WUA7 517 aa15.85■□□□□ 0.13
SSR4-211ENST00000486204 ZBED3Q96IU2 234 aaPredicted RBP15.85■□□□□ 0.13
SSR4-211ENST00000486204 CLMNQ96JQ2 1002 aa15.85■□□□□ 0.13
SSR4-211ENST00000486204 CCDC8Q9H0W5 538 aaPredicted RBP15.85■□□□□ 0.13
SSR4-211ENST00000486204 GNL3LQ9NVN8 582 aaKnown RBP15.85■□□□□ 0.13
SSR4-211ENST00000486204 DENND2AQ9ULE3 1009 aa15.85■□□□□ 0.13
SSR4-211ENST00000486204 PTCH2Q9Y6C5 1203 aa15.85■□□□□ 0.13
SSR4-211ENST00000486204 TRIOBPQ9H2D6 2365 aa15.84■□□□□ 0.13
SSR4-211ENST00000486204 MCAMP43121 646 aa15.84■□□□□ 0.13
SSR4-211ENST00000486204 MMP14P50281 582 aa15.84■□□□□ 0.13
SSR4-211ENST00000486204 MAP3K11Q16584 847 aa15.84■□□□□ 0.13
SSR4-211ENST00000486204 PI16Q6UXB8 463 aa15.84■□□□□ 0.13
SSR4-211ENST00000486204 AACSQ86V21 672 aa15.84■□□□□ 0.13
SSR4-211ENST00000486204 HMG20BQ9P0W2 317 aa15.84■□□□□ 0.13
SSR4-211ENST00000486204 F8W031 263 aaPredicted RBP15.83■□□□□ 0.12
SSR4-211ENST00000486204 PPP1R12BO60237 982 aaPredicted RBP15.83■□□□□ 0.12
SSR4-211ENST00000486204 HDAC1Q13547 482 aaPredicted RBP15.83■□□□□ 0.12
SSR4-211ENST00000486204 MTMR14Q8NCE2 650 aa15.83■□□□□ 0.12
SSR4-211ENST00000486204 WDR66Q8TBY9 1149 aa15.83■□□□□ 0.12
SSR4-211ENST00000486204 ZNF512BQ96KM6 892 aaPredicted RBP15.83■□□□□ 0.12
SSR4-211ENST00000486204 PTPN18Q99952 460 aa15.83■□□□□ 0.12
SSR4-211ENST00000486204 PCDHAC2Q9Y5I4 1007 aa15.83■□□□□ 0.12
SSR4-211ENST00000486204 AK9Q5TCS8 1911 aa15.83■□□□□ 0.12
SSR4-211ENST00000486204 A0A0C4DFX4 3053 aa15.82■□□□□ 0.12
SSR4-211ENST00000486204 UQCRFS1P1P0C7P4 283 aa15.82■□□□□ 0.12
SSR4-211ENST00000486204 PRDX5P30044 214 aa15.82■□□□□ 0.12
SSR4-211ENST00000486204 MNX1P50219 401 aaPredicted RBP15.82■□□□□ 0.12
SSR4-211ENST00000486204 GORABQ5T7V8 394 aa15.82■□□□□ 0.12
SSR4-211ENST00000486204 CLASRPQ8N2M8 674 aaKnown RBP15.82■□□□□ 0.12
SSR4-211ENST00000486204 LRRCC1Q9C099 1032 aa15.82■□□□□ 0.12
SSR4-211ENST00000486204 DEFB129Q9H1M3 183 aa15.82■□□□□ 0.12
SSR4-211ENST00000486204 TTF2Q9UNY4 1162 aaKnown RBP15.82■□□□□ 0.12
SSR4-211ENST00000486204 SUGT1Q9Y2Z0 365 aa15.82■□□□□ 0.12
SSR4-211ENST00000486204 AOX1Q06278 1338 aa15.82■□□□□ 0.12
SSR4-211ENST00000486204 COL6A3P12111 3177 aa15.82■□□□□ 0.12
SSR4-211ENST00000486204 TESPA1A2RU30 521 aaPredicted RBP15.81■□□□□ 0.12
SSR4-211ENST00000486204 UNCXA6NJT0 531 aa15.81■□□□□ 0.12
SSR4-211ENST00000486204 SMARCA5O60264 1052 aaPredicted RBP15.81■□□□□ 0.12
SSR4-211ENST00000486204 SPATA5Q8NB90 893 aa15.81■□□□□ 0.12
SSR4-211ENST00000486204 OTOFQ9HC10 1997 aa15.81■□□□□ 0.12
SSR4-211ENST00000486204 SPDYE2BA6NHP3 402 aa15.8■□□□□ 0.12
SSR4-211ENST00000486204 SPDYE6P0CI01 402 aa15.8■□□□□ 0.12
SSR4-211ENST00000486204 GJA5P36382 358 aa15.8■□□□□ 0.12
SSR4-211ENST00000486204 CFAP100Q494V2 611 aa15.8■□□□□ 0.12
SSR4-211ENST00000486204 CCDC158Q5M9N0 1113 aa15.8■□□□□ 0.12
SSR4-211ENST00000486204 TTC39AQ5SRH9 613 aa15.8■□□□□ 0.12
SSR4-211ENST00000486204 SH3TC2Q8TF17 1288 aa15.8■□□□□ 0.12
SSR4-211ENST00000486204 PRO3102Q9H379 93 aa15.8■□□□□ 0.12
SSR4-211ENST00000486204 SERPINA10Q9UK55 444 aa15.8■□□□□ 0.12
SSR4-211ENST00000486204 MAST3O60307 1309 aa15.79■□□□□ 0.12
SSR4-211ENST00000486204 CRKP46108 304 aa15.79■□□□□ 0.12
SSR4-211ENST00000486204 HDLBPQ00341 1268 aaKnown RBP15.79■□□□□ 0.12
SSR4-211ENST00000486204 ZNF384Q8TF68 577 aa15.79■□□□□ 0.12
SSR4-211ENST00000486204 IREB2P48200 963 aaKnown RBP15.78■□□□□ 0.12
SSR4-211ENST00000486204 DLGAP5Q15398 846 aa15.78■□□□□ 0.12
SSR4-211ENST00000486204 SUPT20HL1Q3ZLR7 823 aa15.78■□□□□ 0.12
SSR4-211ENST00000486204 ZGPATQ8N5A5 531 aaKnown RBP15.78■□□□□ 0.12
SSR4-211ENST00000486204 PRMT6Q96LA8 375 aaPredicted RBP15.78■□□□□ 0.12
SSR4-211ENST00000486204 MRIQ9BWK5 157 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms