RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 ERICH6Q7L0X2 663 aa22.62■■□□□ 1.21
COL1A1-206ENST00000485870 SIRT2Q8IXJ6 389 aa22.62■■□□□ 1.21
COL1A1-206ENST00000485870 APBB1O00213 710 aa22.61■■□□□ 1.21
COL1A1-206ENST00000485870 MKRN3Q13064 507 aaKnown RBP22.61■■□□□ 1.21
COL1A1-206ENST00000485870 MAP3K11Q16584 847 aa22.61■■□□□ 1.21
COL1A1-206ENST00000485870 HSP90AB4PQ58FF6 505 aa22.61■■□□□ 1.21
COL1A1-206ENST00000485870 EAF2Q96CJ1 260 aaPredicted RBP22.61■■□□□ 1.21
COL1A1-206ENST00000485870 SNRKQ9NRH2 765 aa22.61■■□□□ 1.21
COL1A1-206ENST00000485870 DBNLQ9UJU6 430 aaKnown RBP22.61■■□□□ 1.21
COL1A1-206ENST00000485870 USP2O75604 605 aaPredicted RBP22.6■■□□□ 1.21
COL1A1-206ENST00000485870 IREB2P48200 963 aaKnown RBP22.6■■□□□ 1.21
COL1A1-206ENST00000485870 FKBP1CQ5VVH2 108 aa22.6■■□□□ 1.21
COL1A1-206ENST00000485870 CLMNQ96JQ2 1002 aa22.6■■□□□ 1.21
COL1A1-206ENST00000485870 USP40Q9NVE5 1235 aa22.6■■□□□ 1.21
COL1A1-206ENST00000485870 GAKO14976 1311 aa22.59■■□□□ 1.21
COL1A1-206ENST00000485870 MECOMQ03112 1051 aa22.59■■□□□ 1.21
COL1A1-206ENST00000485870 FAM83AQ86UY5 434 aa22.59■■□□□ 1.21
COL1A1-206ENST00000485870 SLF2Q8IX21 1173 aa22.59■■□□□ 1.21
COL1A1-206ENST00000485870 CSRNP1Q96S65 589 aa22.59■■□□□ 1.21
COL1A1-206ENST00000485870 IL1RAPL2Q9NP60 686 aa22.59■■□□□ 1.21
COL1A1-206ENST00000485870 PRDM10Q9NQV6 1147 aa22.59■■□□□ 1.21
COL1A1-206ENST00000485870 AKAP11Q9UKA4 1901 aa22.59■■□□□ 1.21
COL1A1-206ENST00000485870 CA12O43570 354 aa22.58■■□□□ 1.21
COL1A1-206ENST00000485870 TCP10Q12799 353 aa22.58■■□□□ 1.21
COL1A1-206ENST00000485870 NFIAQ12857 509 aa22.58■■□□□ 1.21
COL1A1-206ENST00000485870 AACSQ86V21 672 aa22.58■■□□□ 1.21
COL1A1-206ENST00000485870 RHPN1Q8TCX5 695 aa22.58■■□□□ 1.21
COL1A1-206ENST00000485870 SLC10A4Q96EP9 437 aa22.58■■□□□ 1.21
COL1A1-206ENST00000485870 RAI14Q9P0K7 980 aa22.58■■□□□ 1.21
COL1A1-206ENST00000485870 OTOFQ9HC10 1997 aa22.58■■□□□ 1.2
COL1A1-206ENST00000485870 MROH7-TTC4A0A0A0MT08 1334 aa22.57■■□□□ 1.2
COL1A1-206ENST00000485870 ZNF384Q8TF68 577 aa22.57■■□□□ 1.2
COL1A1-206ENST00000485870 BCL11AQ9H165 835 aa22.57■■□□□ 1.2
COL1A1-206ENST00000485870 LRP2BPQ9P2M1 347 aa22.57■■□□□ 1.2
COL1A1-206ENST00000485870 AK9Q5TCS8 1911 aa22.57■■□□□ 1.2
COL1A1-206ENST00000485870 BTDP43251 543 aa22.56■■□□□ 1.2
COL1A1-206ENST00000485870 RRP1P56182 461 aaKnown RBP22.56■■□□□ 1.2
COL1A1-206ENST00000485870 FAM151AQ8WW52 585 aa22.56■■□□□ 1.2
COL1A1-206ENST00000485870 NSUN4Q96CB9 384 aaKnown RBP22.56■■□□□ 1.2
COL1A1-206ENST00000485870 FAM163AQ96GL9 167 aaPredicted RBP22.56■■□□□ 1.2
COL1A1-206ENST00000485870 ZNF512BQ96KM6 892 aaPredicted RBP22.56■■□□□ 1.2
COL1A1-206ENST00000485870 RPAP1Q9BWH6 1393 aaPredicted RBP22.55■■□□□ 1.2
COL1A1-206ENST00000485870 ZAP70P43403 619 aa22.55■■□□□ 1.2
COL1A1-206ENST00000485870 GSTO1P78417 241 aa22.55■■□□□ 1.2
COL1A1-206ENST00000485870 SPRYD7Q5W111 196 aa22.55■■□□□ 1.2
COL1A1-206ENST00000485870 ANKRD13AQ8IZ07 590 aa22.55■■□□□ 1.2
COL1A1-206ENST00000485870 TNS4Q8IZW8 715 aa22.55■■□□□ 1.2
COL1A1-206ENST00000485870 KIF1BPQ96EK5 621 aa22.55■■□□□ 1.2
COL1A1-206ENST00000485870 FAM198AQ9UFP1 575 aa22.55■■□□□ 1.2
COL1A1-206ENST00000485870 TRPA1O75762 1119 aa22.54■■□□□ 1.2
COL1A1-206ENST00000485870 CYP2E1P05181 493 aaPredicted RBP22.54■■□□□ 1.2
COL1A1-206ENST00000485870 REM2Q8IYK8 340 aaPredicted RBP22.54■■□□□ 1.2
COL1A1-206ENST00000485870 CLASRPQ8N2M8 674 aaKnown RBP22.54■■□□□ 1.2
COL1A1-206ENST00000485870 WNK4Q96J92 1243 aa22.54■■□□□ 1.2
COL1A1-206ENST00000485870 RNF186Q9NXI6 227 aa22.54■■□□□ 1.2
COL1A1-206ENST00000485870 UNCXA6NJT0 531 aa22.53■■□□□ 1.2
COL1A1-206ENST00000485870 RAB11FIP3O75154 756 aa22.53■■□□□ 1.2
COL1A1-206ENST00000485870 LDHCP07864 332 aa22.53■■□□□ 1.2
COL1A1-206ENST00000485870 HOOK2Q96ED9 719 aa22.53■■□□□ 1.2
COL1A1-206ENST00000485870 ELP3Q9H9T3 547 aa22.53■■□□□ 1.2
COL1A1-206ENST00000485870 MYO5AQ9Y4I1 1855 aaKnown RBP22.52■■□□□ 1.2
COL1A1-206ENST00000485870 GPR75-ASB3A0A0A6YYF3 556 aa22.52■■□□□ 1.2
COL1A1-206ENST00000485870 RGS3P49796 1198 aa22.52■■□□□ 1.2
COL1A1-206ENST00000485870 ZFPM1Q8IX07 1006 aa22.52■■□□□ 1.2
COL1A1-206ENST00000485870 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.52■■□□□ 1.2
COL1A1-206ENST00000485870 IDI2Q9BXS1 227 aa22.52■■□□□ 1.2
COL1A1-206ENST00000485870 PIH1D3Q9NQM4 214 aaKnown RBP22.52■■□□□ 1.2
COL1A1-206ENST00000485870 SAGE1Q9NXZ1 904 aa22.52■■□□□ 1.2
COL1A1-206ENST00000485870 NDUFB9Q9Y6M9 179 aa22.52■■□□□ 1.2
COL1A1-206ENST00000485870 MAST2Q6P0Q8 1798 aa22.51■■□□□ 1.19
COL1A1-206ENST00000485870 MAP3K9P80192 1104 aa22.51■■□□□ 1.19
COL1A1-206ENST00000485870 SREBF2Q12772 1141 aa22.51■■□□□ 1.19
COL1A1-206ENST00000485870 PICALMQ13492 652 aa22.51■■□□□ 1.19
COL1A1-206ENST00000485870 VGLL4Q14135 290 aa22.51■■□□□ 1.19
COL1A1-206ENST00000485870 DCAF15Q66K64 600 aa22.51■■□□□ 1.19
COL1A1-206ENST00000485870 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.51■■□□□ 1.19
COL1A1-206ENST00000485870 MIGA2Q7L4E1 593 aa22.51■■□□□ 1.19
COL1A1-206ENST00000485870 WRNIP1Q96S55 665 aa22.51■■□□□ 1.19
COL1A1-206ENST00000485870 RFX7Q2KHR2 1363 aa22.5■■□□□ 1.19
COL1A1-206ENST00000485870 CASP8AP2Q9UKL3 1982 aa22.5■■□□□ 1.19
COL1A1-206ENST00000485870 WDHD1O75717 1129 aaPredicted RBP22.5■■□□□ 1.19
COL1A1-206ENST00000485870 IFIT2P09913 472 aaKnown RBP22.5■■□□□ 1.19
COL1A1-206ENST00000485870 ZBTB48P10074 688 aaPredicted RBP22.5■■□□□ 1.19
COL1A1-206ENST00000485870 GJA5P36382 358 aa22.5■■□□□ 1.19
COL1A1-206ENST00000485870 RHBDL3P58872 404 aa22.5■■□□□ 1.19
COL1A1-206ENST00000485870 NAA16Q6N069 864 aaPredicted RBP22.5■■□□□ 1.19
COL1A1-206ENST00000485870 DDX4Q9NQI0 724 aaKnown RBP22.5■■□□□ 1.19
COL1A1-206ENST00000485870 CSADQ9Y600 493 aa22.5■■□□□ 1.19
COL1A1-206ENST00000485870 ENTPD3O75355 529 aa22.49■■□□□ 1.19
COL1A1-206ENST00000485870 TM4SF4P48230 202 aa22.49■■□□□ 1.19
COL1A1-206ENST00000485870 OPTNQ96CV9 577 aa22.49■■□□□ 1.19
COL1A1-206ENST00000485870 ZNF341Q9BYN7 854 aa22.49■■□□□ 1.19
COL1A1-206ENST00000485870 IFFO2Q5TF58 517 aa22.48■■□□□ 1.19
COL1A1-206ENST00000485870 ZSCAN29Q8IWY8 852 aaPredicted RBP22.48■■□□□ 1.19
COL1A1-206ENST00000485870 CNKSR2Q8WXI2 1034 aa22.48■■□□□ 1.19
COL1A1-206ENST00000485870 NOL10Q9BSC4 688 aaKnown RBP22.48■■□□□ 1.19
COL1A1-206ENST00000485870 DOCK2Q92608 1830 aa22.47■■□□□ 1.19
COL1A1-206ENST00000485870 MANSC4A6NHS7 340 aaPredicted RBP22.47■■□□□ 1.19
COL1A1-206ENST00000485870 IDH1O75874 414 aaKnown RBP22.47■■□□□ 1.19
COL1A1-206ENST00000485870 ZKSCAN4Q969J2 545 aaPredicted RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms