RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 GDF6Q6KF10 455 aaPredicted RBP6.42□□□□□ -1.38
XPA-203ENST00000485042 ZNF746Q6NUN9 644 aaPredicted RBP6.42□□□□□ -1.38
XPA-203ENST00000485042 HNRNPLLQ8WVV9 542 aaKnown RBP6.42□□□□□ -1.38
XPA-203ENST00000485042 SRPK1Q96SB4 655 aaKnown RBP6.42□□□□□ -1.38
XPA-203ENST00000485042 ADAM19Q9H013 955 aa6.42□□□□□ -1.38
XPA-203ENST00000485042 SH2B1Q9NRF2 756 aaPredicted RBP6.42□□□□□ -1.38
XPA-203ENST00000485042 PRKAG3Q9UGI9 489 aa6.42□□□□□ -1.38
XPA-203ENST00000485042 NAGPAQ9UK23 515 aa6.42□□□□□ -1.38
XPA-203ENST00000485042 TBX22Q9Y458 520 aa6.42□□□□□ -1.38
XPA-203ENST00000485042 FAM221AA4D161 298 aa6.41□□□□□ -1.38
XPA-203ENST00000485042 KLF4O43474 513 aa6.41□□□□□ -1.38
XPA-203ENST00000485042 ARHGEF15O94989 841 aa6.41□□□□□ -1.38
XPA-203ENST00000485042 ARAFP10398 606 aa6.41□□□□□ -1.38
XPA-203ENST00000485042 ESRRAP11474 423 aaPredicted RBP6.41□□□□□ -1.38
XPA-203ENST00000485042 CDC27P30260 824 aa6.41□□□□□ -1.38
XPA-203ENST00000485042 ZNF165P49910 485 aa6.41□□□□□ -1.38
XPA-203ENST00000485042 SERINC3Q13530 473 aa6.41□□□□□ -1.38
XPA-203ENST00000485042 RAB33AQ14088 237 aa6.41□□□□□ -1.38
XPA-203ENST00000485042 TNNI3KQ59H18 835 aa6.41□□□□□ -1.38
XPA-203ENST00000485042 PSAPL1Q6NUJ1 521 aa6.41□□□□□ -1.38
XPA-203ENST00000485042 ADAMTSL4Q6UY14 1074 aa6.41□□□□□ -1.38
XPA-203ENST00000485042 GRIN3AQ8TCU5 1115 aa6.41□□□□□ -1.38
XPA-203ENST00000485042 STK35Q8TDR2 534 aa6.41□□□□□ -1.38
XPA-203ENST00000485042 MKL1Q969V6 931 aa6.41□□□□□ -1.38
XPA-203ENST00000485042 SHDQ96IW2 340 aa6.41□□□□□ -1.38
XPA-203ENST00000485042 LPIN3Q9BQK8 851 aa6.41□□□□□ -1.38
XPA-203ENST00000485042 LRRC3Q9BY71 257 aa6.41□□□□□ -1.38
XPA-203ENST00000485042 CCDC85CA6NKD9 419 aa6.4□□□□□ -1.38
XPA-203ENST00000485042 ADARB2-AS1A8MUL3 147 aa6.4□□□□□ -1.38
XPA-203ENST00000485042 SMAD7O15105 426 aaKnown RBP6.4□□□□□ -1.38
XPA-203ENST00000485042 CILPO75339 1184 aa6.4□□□□□ -1.38
XPA-203ENST00000485042 CDC25BP30305 580 aa6.4□□□□□ -1.38
XPA-203ENST00000485042 RNFT1Q5M7Z0 435 aa6.4□□□□□ -1.38
XPA-203ENST00000485042 GK5Q6ZS86 529 aa6.4□□□□□ -1.38
XPA-203ENST00000485042 REC114Q7Z4M0 266 aa6.4□□□□□ -1.38
XPA-203ENST00000485042 WHAMMQ8TF30 809 aa6.4□□□□□ -1.38
XPA-203ENST00000485042 NANOS1Q8WY41 292 aaKnown RBP6.4□□□□□ -1.38
XPA-203ENST00000485042 BRMS1Q9HCU9 246 aa6.4□□□□□ -1.38
XPA-203ENST00000485042 FRRS1LQ9P0K9 344 aa6.4□□□□□ -1.38
XPA-203ENST00000485042 KLF15Q9UIH9 416 aa6.4□□□□□ -1.38
XPA-203ENST00000485042 NSFL1CQ9UNZ2 370 aaKnown RBP6.4□□□□□ -1.38
XPA-203ENST00000485042 NEURL1BA8MQ27 555 aa6.39□□□□□ -1.39
XPA-203ENST00000485042 ADAM23O75077 832 aa6.39□□□□□ -1.39
XPA-203ENST00000485042 RGS9O75916 674 aaPredicted RBP6.39□□□□□ -1.39
XPA-203ENST00000485042 SLURP2P0DP57 97 aa6.39□□□□□ -1.39
XPA-203ENST00000485042 CDK11BP21127 795 aaKnown RBP6.39□□□□□ -1.39
XPA-203ENST00000485042 ALAS2P22557 587 aa6.39□□□□□ -1.39
XPA-203ENST00000485042 AP3B2Q13367 1082 aa6.39□□□□□ -1.39
XPA-203ENST00000485042 MAP1SQ66K74 1059 aaPredicted RBP6.39□□□□□ -1.39
XPA-203ENST00000485042 ZNF662Q6ZS27 426 aa6.39□□□□□ -1.39
XPA-203ENST00000485042 JAZF1Q86VZ6 243 aa6.39□□□□□ -1.39
XPA-203ENST00000485042 SCARF2Q96GP6 870 aaPredicted RBP6.39□□□□□ -1.39
XPA-203ENST00000485042 MRPL42Q9Y6G3 142 aaKnown RBP6.39□□□□□ -1.39
XPA-203ENST00000485042 DCAF1Q9Y4B6 1507 aa6.39□□□□□ -1.39
XPA-203ENST00000485042 ELOA3CA0A087WX78 387 aaPredicted RBP6.38□□□□□ -1.39
XPA-203ENST00000485042 ELOA3DA6NLF2 546 aaPredicted RBP6.38□□□□□ -1.39
XPA-203ENST00000485042 SOX1O00570 391 aaPredicted RBP6.38□□□□□ -1.39
XPA-203ENST00000485042 CLSTN1O94985 981 aa6.38□□□□□ -1.39
XPA-203ENST00000485042 IMPDH2P12268 514 aa6.38□□□□□ -1.39
XPA-203ENST00000485042 EPHA1P21709 976 aa6.38□□□□□ -1.39
XPA-203ENST00000485042 MAP2K3P46734 347 aa6.38□□□□□ -1.39
XPA-203ENST00000485042 GIPRP48546 466 aa6.38□□□□□ -1.39
XPA-203ENST00000485042 GSTM4Q03013 218 aa6.38□□□□□ -1.39
XPA-203ENST00000485042 CLCQ05315 142 aa6.38□□□□□ -1.39
XPA-203ENST00000485042 ELOA3BQ3SY89 546 aa6.38□□□□□ -1.39
XPA-203ENST00000485042 REXO1Q8N1G1 1221 aaKnown RBP6.38□□□□□ -1.39
XPA-203ENST00000485042 CACTIN-AS1Q8N1I8 211 aa6.38□□□□□ -1.39
XPA-203ENST00000485042 NLGN1Q8N2Q7 840 aa6.38□□□□□ -1.39
XPA-203ENST00000485042 ELOA3Q8NG57 546 aa6.38□□□□□ -1.39
XPA-203ENST00000485042 NUDT8Q8WV74 236 aa6.38□□□□□ -1.39
XPA-203ENST00000485042 SLC7A3Q8WY07 619 aa6.38□□□□□ -1.39
XPA-203ENST00000485042 KCNB2Q92953 911 aa6.38□□□□□ -1.39
XPA-203ENST00000485042 DEPDC7Q96QD5 511 aa6.38□□□□□ -1.39
XPA-203ENST00000485042 H3BRJ5 948 aa6.37□□□□□ -1.39
XPA-203ENST00000485042 TRIM37O94972 964 aa6.37□□□□□ -1.39
XPA-203ENST00000485042 GSTP1P09211 210 aaKnown RBP6.37□□□□□ -1.39
XPA-203ENST00000485042 ARL4DP49703 201 aa6.37□□□□□ -1.39
XPA-203ENST00000485042 ZNF252P-AS1Q0IIN9 211 aa6.37□□□□□ -1.39
XPA-203ENST00000485042 MPRIPQ6WCQ1 1025 aa6.37□□□□□ -1.39
XPA-203ENST00000485042 FCHSD1Q86WN1 690 aa6.37□□□□□ -1.39
XPA-203ENST00000485042 IL22RA1Q8N6P7 574 aa6.37□□□□□ -1.39
XPA-203ENST00000485042 FAM169BQ8N8A8 192 aa6.37□□□□□ -1.39
XPA-203ENST00000485042 OR6P1Q8NGX9 317 aa6.37□□□□□ -1.39
XPA-203ENST00000485042 TTC9Q92623 222 aa6.37□□□□□ -1.39
XPA-203ENST00000485042 ACSBG1Q96GR2 724 aa6.37□□□□□ -1.39
XPA-203ENST00000485042 ZC3H12CQ9C0D7 883 aaKnown RBP6.37□□□□□ -1.39
XPA-203ENST00000485042 SNTG2Q9NY99 539 aa6.37□□□□□ -1.39
XPA-203ENST00000485042 ACTR10Q9NZ32 417 aa6.37□□□□□ -1.39
XPA-203ENST00000485042 GGA1Q9UJY5 639 aa6.37□□□□□ -1.39
XPA-203ENST00000485042 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.37□□□□□ -1.39
XPA-203ENST00000485042 MSTNO14793 375 aa6.36□□□□□ -1.39
XPA-203ENST00000485042 RPL6Q02878 288 aaKnown RBP6.36□□□□□ -1.39
XPA-203ENST00000485042 PTPN11Q06124 597 aaPredicted RBP6.36□□□□□ -1.39
XPA-203ENST00000485042 GAS6Q14393 721 aa6.36□□□□□ -1.39
XPA-203ENST00000485042 EGFLAMQ63HQ2 1017 aa6.36□□□□□ -1.39
XPA-203ENST00000485042 SCARA3Q6AZY7 606 aa6.36□□□□□ -1.39
XPA-203ENST00000485042 FAM117BQ6P1L5 589 aa6.36□□□□□ -1.39
XPA-203ENST00000485042 GAL3ST3Q96A11 431 aa6.36□□□□□ -1.39
XPA-203ENST00000485042 JPH1Q9HDC5 661 aaPredicted RBP6.36□□□□□ -1.39
XPA-203ENST00000485042 ST7Q9NRC1 585 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms