RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 PPATQ06203 517 aa13.79□□□□□ -0.2
SMARCC1-205ENST00000483847 APOBEC3HQ6NTF7 200 aaKnown RBP13.79□□□□□ -0.2
SMARCC1-205ENST00000483847 FBXO33Q7Z6M2 555 aa13.79□□□□□ -0.2
SMARCC1-205ENST00000483847 FAM83AQ86UY5 434 aa13.79□□□□□ -0.2
SMARCC1-205ENST00000483847 U2AF1L4Q8WU68 220 aaKnown RBP13.79□□□□□ -0.2
SMARCC1-205ENST00000483847 LRCH3Q96II8 777 aa13.79□□□□□ -0.2
SMARCC1-205ENST00000483847 UNC93B1Q9H1C4 597 aa13.79□□□□□ -0.2
SMARCC1-205ENST00000483847 BIN2Q9UBW5 565 aaPredicted RBP13.79□□□□□ -0.2
SMARCC1-205ENST00000483847 NR2E3Q9Y5X4 410 aa13.79□□□□□ -0.2
SMARCC1-205ENST00000483847 MGAMO43451 1857 aa13.78□□□□□ -0.2
SMARCC1-205ENST00000483847 FARP2O94887 1054 aaPredicted RBP13.78□□□□□ -0.2
SMARCC1-205ENST00000483847 HOXD10P28358 340 aa13.78□□□□□ -0.2
SMARCC1-205ENST00000483847 ZDHHC15Q96MV8 337 aa13.78□□□□□ -0.2
SMARCC1-205ENST00000483847 ZNF341Q9BYN7 854 aa13.78□□□□□ -0.2
SMARCC1-205ENST00000483847 GABRQQ9UN88 632 aa13.78□□□□□ -0.2
SMARCC1-205ENST00000483847 FANCIQ9NVI1 1328 aa13.78□□□□□ -0.2
SMARCC1-205ENST00000483847 VAMP4O75379 141 aa13.77□□□□□ -0.21
SMARCC1-205ENST00000483847 CYP2C8P10632 490 aa13.77□□□□□ -0.21
SMARCC1-205ENST00000483847 CCDC27Q2M243 656 aa13.77□□□□□ -0.21
SMARCC1-205ENST00000483847 FKBP1CQ5VVH2 108 aa13.77□□□□□ -0.21
SMARCC1-205ENST00000483847 DCAF15Q66K64 600 aa13.77□□□□□ -0.21
SMARCC1-205ENST00000483847 KAZALD1Q96I82 304 aa13.77□□□□□ -0.21
SMARCC1-205ENST00000483847 RPAP1Q9BWH6 1393 aaPredicted RBP13.77□□□□□ -0.21
SMARCC1-205ENST00000483847 TMOD2Q9NZR1 351 aa13.77□□□□□ -0.21
SMARCC1-205ENST00000483847 KCNH4Q9UQ05 1017 aa13.77□□□□□ -0.21
SMARCC1-205ENST00000483847 ALPK3Q96L96 1907 aa13.76□□□□□ -0.21
SMARCC1-205ENST00000483847 SGPL1O95470 568 aa13.76□□□□□ -0.21
SMARCC1-205ENST00000483847 BCRP11274 1271 aa13.76□□□□□ -0.21
SMARCC1-205ENST00000483847 UBXN2AP68543 259 aa13.76□□□□□ -0.21
SMARCC1-205ENST00000483847 GPAT2Q6NUI2 795 aa13.76□□□□□ -0.21
SMARCC1-205ENST00000483847 VPS37DQ86XT2 251 aa13.76□□□□□ -0.21
SMARCC1-205ENST00000483847 TBC1D22AQ8WUA7 517 aa13.76□□□□□ -0.21
SMARCC1-205ENST00000483847 HOOK2Q96ED9 719 aa13.76□□□□□ -0.21
SMARCC1-205ENST00000483847 STAP2Q9UGK3 403 aa13.76□□□□□ -0.21
SMARCC1-205ENST00000483847 ZNF112Q9UJU3 913 aa13.76□□□□□ -0.21
SMARCC1-205ENST00000483847 IL16Q14005 1332 aa13.75□□□□□ -0.21
SMARCC1-205ENST00000483847 A0A1W2PPC1 479 aa13.75□□□□□ -0.21
SMARCC1-205ENST00000483847 EVI5O60447 810 aa13.75□□□□□ -0.21
SMARCC1-205ENST00000483847 FRAT2O75474 233 aaPredicted RBP13.75□□□□□ -0.21
SMARCC1-205ENST00000483847 ELNP15502 786 aa13.75□□□□□ -0.21
SMARCC1-205ENST00000483847 BCAMP50895 628 aa13.75□□□□□ -0.21
SMARCC1-205ENST00000483847 LRRC24Q50LG9 513 aa13.75□□□□□ -0.21
SMARCC1-205ENST00000483847 CCDC184Q52MB2 194 aa13.75□□□□□ -0.21
SMARCC1-205ENST00000483847 SLAIN1Q8ND83 568 aa13.75□□□□□ -0.21
SMARCC1-205ENST00000483847 SUCLG2Q96I99 432 aa13.75□□□□□ -0.21
SMARCC1-205ENST00000483847 C9orf78Q9NZ63 289 aaPredicted RBP13.75□□□□□ -0.21
SMARCC1-205ENST00000483847 MROH5Q6ZUA9 1318 aa13.74□□□□□ -0.21
SMARCC1-205ENST00000483847 ADCY3O60266 1144 aa13.74□□□□□ -0.21
SMARCC1-205ENST00000483847 FCGRTP55899 365 aa13.74□□□□□ -0.21
SMARCC1-205ENST00000483847 EXOSC9Q06265 439 aaKnown RBP13.74□□□□□ -0.21
SMARCC1-205ENST00000483847 TCP10Q12799 353 aa13.74□□□□□ -0.21
SMARCC1-205ENST00000483847 VGLL2Q8N8G2 317 aa13.74□□□□□ -0.21
SMARCC1-205ENST00000483847 FAM151AQ8WW52 585 aa13.74□□□□□ -0.21
SMARCC1-205ENST00000483847 DEFB118Q96PH6 123 aa13.74□□□□□ -0.21
SMARCC1-205ENST00000483847 PARK7Q99497 189 aaKnown RBP13.74□□□□□ -0.21
SMARCC1-205ENST00000483847 MRIQ9BWK5 157 aa13.74□□□□□ -0.21
SMARCC1-205ENST00000483847 AK9Q5TCS8 1911 aa13.73□□□□□ -0.21
SMARCC1-205ENST00000483847 INHAP05111 366 aa13.73□□□□□ -0.21
SMARCC1-205ENST00000483847 NBPF7P0C2Y1 421 aaPredicted RBP13.73□□□□□ -0.21
SMARCC1-205ENST00000483847 FLT3LGP49771 235 aa13.73□□□□□ -0.21
SMARCC1-205ENST00000483847 NFIAQ12857 509 aa13.73□□□□□ -0.21
SMARCC1-205ENST00000483847 CAVIN4Q5BKX8 364 aa13.73□□□□□ -0.21
SMARCC1-205ENST00000483847 HHIPL2Q6UWX4 724 aa13.73□□□□□ -0.21
SMARCC1-205ENST00000483847 TFRCP02786 760 aaKnown RBP13.72□□□□□ -0.21
SMARCC1-205ENST00000483847 METTL24Q5JXM2 366 aa13.72□□□□□ -0.21
SMARCC1-205ENST00000483847 NOL9Q5SY16 702 aaKnown RBP13.72□□□□□ -0.21
SMARCC1-205ENST00000483847 CDC42EP5Q6NZY7 148 aa13.72□□□□□ -0.21
SMARCC1-205ENST00000483847 SLC4A10Q6U841 1118 aa13.72□□□□□ -0.21
SMARCC1-205ENST00000483847 KLHDC4Q8TBB5 520 aa13.72□□□□□ -0.21
SMARCC1-205ENST00000483847 PAWRQ96IZ0 340 aaKnown RBP13.72□□□□□ -0.21
SMARCC1-205ENST00000483847 MAST3O60307 1309 aa13.71□□□□□ -0.21
SMARCC1-205ENST00000483847 UNC80Q8N2C7 3258 aa13.71□□□□□ -0.21
SMARCC1-205ENST00000483847 ALDH1L1O75891 902 aa13.71□□□□□ -0.21
SMARCC1-205ENST00000483847 PDE8BO95263 885 aa13.71□□□□□ -0.21
SMARCC1-205ENST00000483847 DIXDC1Q155Q3 683 aa13.71□□□□□ -0.21
SMARCC1-205ENST00000483847 ZFPM1Q8IX07 1006 aa13.71□□□□□ -0.21
SMARCC1-205ENST00000483847 DIS3LQ8TF46 1054 aaKnown RBP13.71□□□□□ -0.21
SMARCC1-205ENST00000483847 SRCIN1Q9C0H9 1055 aa13.71□□□□□ -0.21
SMARCC1-205ENST00000483847 BICC1Q9H694 974 aaKnown RBP13.71□□□□□ -0.21
SMARCC1-205ENST00000483847 PAK6Q9NQU5 681 aaPredicted RBP13.71□□□□□ -0.21
SMARCC1-205ENST00000483847 FAM198AQ9UFP1 575 aa13.71□□□□□ -0.21
SMARCC1-205ENST00000483847 SUGT1Q9Y2Z0 365 aa13.71□□□□□ -0.21
SMARCC1-205ENST00000483847 DAGLAQ9Y4D2 1042 aa13.71□□□□□ -0.21
SMARCC1-205ENST00000483847 MYH13Q9UKX3 1938 aa13.7□□□□□ -0.22
SMARCC1-205ENST00000483847 CXCL11O14625 94 aa13.7□□□□□ -0.22
SMARCC1-205ENST00000483847 MNX1P50219 401 aaPredicted RBP13.7□□□□□ -0.22
SMARCC1-205ENST00000483847 Q7L0L9 218 aa13.7□□□□□ -0.22
SMARCC1-205ENST00000483847 ANKRD44Q8N8A2 993 aa13.7□□□□□ -0.22
SMARCC1-205ENST00000483847 GDF15Q99988 308 aa13.7□□□□□ -0.22
SMARCC1-205ENST00000483847 CRISPLD2Q9H0B8 497 aa13.7□□□□□ -0.22
SMARCC1-205ENST00000483847 SPINK5Q9NQ38 1064 aaPredicted RBP13.7□□□□□ -0.22
SMARCC1-205ENST00000483847 ZHX2Q9Y6X8 837 aa13.7□□□□□ -0.22
SMARCC1-205ENST00000483847 ATRNL1Q5VV63 1379 aa13.7□□□□□ -0.22
SMARCC1-205ENST00000483847 PTPRFP10586 1907 aa13.69□□□□□ -0.22
SMARCC1-205ENST00000483847 A0A0G2JLL6 359 aaPredicted RBP13.69□□□□□ -0.22
SMARCC1-205ENST00000483847 PHF20L1A8MW92 1017 aa13.69□□□□□ -0.22
SMARCC1-205ENST00000483847 TNPO2O14787 897 aaKnown RBP13.69□□□□□ -0.22
SMARCC1-205ENST00000483847 SLURP2P0DP57 97 aa13.69□□□□□ -0.22
SMARCC1-205ENST00000483847 FGFR2P21802 821 aa13.69□□□□□ -0.22
SMARCC1-205ENST00000483847 IRF5Q13568 498 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 268.5 ms