RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 ERICH6Q7L0X2 663 aa20.34■□□□□ 0.85
VAMP4-204ENST00000482519 ERC1Q8IUD2 1116 aa20.34■□□□□ 0.85
VAMP4-204ENST00000482519 TNS4Q8IZW8 715 aa20.34■□□□□ 0.85
VAMP4-204ENST00000482519 TEPSINQ96N21 525 aa20.34■□□□□ 0.85
VAMP4-204ENST00000482519 CSRNP1Q96S65 589 aa20.34■□□□□ 0.85
VAMP4-204ENST00000482519 SNRKQ9NRH2 765 aa20.34■□□□□ 0.85
VAMP4-204ENST00000482519 USP40Q9NVE5 1235 aa20.34■□□□□ 0.85
VAMP4-204ENST00000482519 MYH2Q9UKX2 1941 aa20.33■□□□□ 0.85
VAMP4-204ENST00000482519 ZBTB22O15209 634 aa20.33■□□□□ 0.85
VAMP4-204ENST00000482519 CA12O43570 354 aa20.33■□□□□ 0.85
VAMP4-204ENST00000482519 USP2O75604 605 aaPredicted RBP20.33■□□□□ 0.85
VAMP4-204ENST00000482519 MCAMP43121 646 aa20.33■□□□□ 0.85
VAMP4-204ENST00000482519 CLMNQ96JQ2 1002 aa20.33■□□□□ 0.85
VAMP4-204ENST00000482519 PRDM10Q9NQV6 1147 aa20.33■□□□□ 0.85
VAMP4-204ENST00000482519 RAI14Q9P0K7 980 aa20.33■□□□□ 0.85
VAMP4-204ENST00000482519 MECOMQ03112 1051 aa20.32■□□□□ 0.84
VAMP4-204ENST00000482519 TCP10Q12799 353 aa20.32■□□□□ 0.84
VAMP4-204ENST00000482519 HSP90AB4PQ58FF6 505 aa20.32■□□□□ 0.84
VAMP4-204ENST00000482519 SLF2Q8IX21 1173 aa20.32■□□□□ 0.84
VAMP4-204ENST00000482519 EAF2Q96CJ1 260 aaPredicted RBP20.32■□□□□ 0.84
VAMP4-204ENST00000482519 TLR7Q9NYK1 1049 aaKnown RBP20.32■□□□□ 0.84
VAMP4-204ENST00000482519 LRP2BPQ9P2M1 347 aa20.32■□□□□ 0.84
VAMP4-204ENST00000482519 TRPA1O75762 1119 aa20.31■□□□□ 0.84
VAMP4-204ENST00000482519 MAP3K11Q16584 847 aa20.31■□□□□ 0.84
VAMP4-204ENST00000482519 FKBP1CQ5VVH2 108 aa20.31■□□□□ 0.84
VAMP4-204ENST00000482519 FAM83AQ86UY5 434 aa20.31■□□□□ 0.84
VAMP4-204ENST00000482519 AACSQ86V21 672 aa20.31■□□□□ 0.84
VAMP4-204ENST00000482519 SIRT2Q8IXJ6 389 aa20.31■□□□□ 0.84
VAMP4-204ENST00000482519 IL1RAPL2Q9NP60 686 aa20.31■□□□□ 0.84
VAMP4-204ENST00000482519 DBNLQ9UJU6 430 aaKnown RBP20.31■□□□□ 0.84
VAMP4-204ENST00000482519 AK9Q5TCS8 1911 aa20.3■□□□□ 0.84
VAMP4-204ENST00000482519 AKAP11Q9UKA4 1901 aa20.3■□□□□ 0.84
VAMP4-204ENST00000482519 NFIAQ12857 509 aa20.3■□□□□ 0.84
VAMP4-204ENST00000482519 REM2Q8IYK8 340 aaPredicted RBP20.3■□□□□ 0.84
VAMP4-204ENST00000482519 RNF186Q9NXI6 227 aa20.3■□□□□ 0.84
VAMP4-204ENST00000482519 BTDP43251 543 aa20.29■□□□□ 0.84
VAMP4-204ENST00000482519 SPRYD7Q5W111 196 aa20.29■□□□□ 0.84
VAMP4-204ENST00000482519 ANKRD13AQ8IZ07 590 aa20.29■□□□□ 0.84
VAMP4-204ENST00000482519 RHPN1Q8TCX5 695 aa20.29■□□□□ 0.84
VAMP4-204ENST00000482519 FAM151AQ8WW52 585 aa20.29■□□□□ 0.84
VAMP4-204ENST00000482519 GAKO14976 1311 aa20.28■□□□□ 0.84
VAMP4-204ENST00000482519 GSTO1P78417 241 aa20.28■□□□□ 0.84
VAMP4-204ENST00000482519 MIGA2Q7L4E1 593 aa20.28■□□□□ 0.84
VAMP4-204ENST00000482519 HOOK2Q96ED9 719 aa20.28■□□□□ 0.84
VAMP4-204ENST00000482519 ELP3Q9H9T3 547 aa20.28■□□□□ 0.84
VAMP4-204ENST00000482519 MROH7-TTC4A0A0A0MT08 1334 aa20.27■□□□□ 0.84
VAMP4-204ENST00000482519 LDHCP07864 332 aa20.27■□□□□ 0.84
VAMP4-204ENST00000482519 ZNF384Q8TF68 577 aa20.27■□□□□ 0.84
VAMP4-204ENST00000482519 NSUN4Q96CB9 384 aaKnown RBP20.27■□□□□ 0.84
VAMP4-204ENST00000482519 WNK4Q96J92 1243 aa20.27■□□□□ 0.84
VAMP4-204ENST00000482519 FAM198AQ9UFP1 575 aa20.27■□□□□ 0.84
VAMP4-204ENST00000482519 UNCXA6NJT0 531 aa20.26■□□□□ 0.83
VAMP4-204ENST00000482519 ZAP70P43403 619 aa20.26■□□□□ 0.83
VAMP4-204ENST00000482519 RGS3P49796 1198 aa20.26■□□□□ 0.83
VAMP4-204ENST00000482519 MAP3K9P80192 1104 aa20.26■□□□□ 0.83
VAMP4-204ENST00000482519 SREBF2Q12772 1141 aa20.26■□□□□ 0.83
VAMP4-204ENST00000482519 PICALMQ13492 652 aa20.26■□□□□ 0.83
VAMP4-204ENST00000482519 ZFPM1Q8IX07 1006 aa20.26■□□□□ 0.83
VAMP4-204ENST00000482519 CLASRPQ8N2M8 674 aaKnown RBP20.26■□□□□ 0.83
VAMP4-204ENST00000482519 KIF1BPQ96EK5 621 aa20.26■□□□□ 0.83
VAMP4-204ENST00000482519 FAM163AQ96GL9 167 aaPredicted RBP20.26■□□□□ 0.83
VAMP4-204ENST00000482519 ZNF512BQ96KM6 892 aaPredicted RBP20.26■□□□□ 0.83
VAMP4-204ENST00000482519 SAGE1Q9NXZ1 904 aa20.26■□□□□ 0.83
VAMP4-204ENST00000482519 CSADQ9Y600 493 aa20.26■□□□□ 0.83
VAMP4-204ENST00000482519 OTOFQ9HC10 1997 aa20.25■□□□□ 0.83
VAMP4-204ENST00000482519 CYP2E1P05181 493 aaPredicted RBP20.25■□□□□ 0.83
VAMP4-204ENST00000482519 VGLL4Q14135 290 aa20.25■□□□□ 0.83
VAMP4-204ENST00000482519 DCAF15Q66K64 600 aa20.25■□□□□ 0.83
VAMP4-204ENST00000482519 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.25■□□□□ 0.83
VAMP4-204ENST00000482519 ZSCAN29Q8IWY8 852 aaPredicted RBP20.25■□□□□ 0.83
VAMP4-204ENST00000482519 WRNIP1Q96S55 665 aa20.25■□□□□ 0.83
VAMP4-204ENST00000482519 NDUFB9Q9Y6M9 179 aa20.25■□□□□ 0.83
VAMP4-204ENST00000482519 CASP8AP2Q9UKL3 1982 aa20.25■□□□□ 0.83
VAMP4-204ENST00000482519 GPR75-ASB3A0A0A6YYF3 556 aa20.24■□□□□ 0.83
VAMP4-204ENST00000482519 RAB11FIP3O75154 756 aa20.24■□□□□ 0.83
VAMP4-204ENST00000482519 IFIT2P09913 472 aaKnown RBP20.24■□□□□ 0.83
VAMP4-204ENST00000482519 ZBTB48P10074 688 aaPredicted RBP20.24■□□□□ 0.83
VAMP4-204ENST00000482519 TM4SF4P48230 202 aa20.24■□□□□ 0.83
VAMP4-204ENST00000482519 RRP1P56182 461 aaKnown RBP20.24■□□□□ 0.83
VAMP4-204ENST00000482519 NAA16Q6N069 864 aaPredicted RBP20.24■□□□□ 0.83
VAMP4-204ENST00000482519 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.24■□□□□ 0.83
VAMP4-204ENST00000482519 ZKSCAN4Q969J2 545 aaPredicted RBP20.24■□□□□ 0.83
VAMP4-204ENST00000482519 OPTNQ96CV9 577 aa20.24■□□□□ 0.83
VAMP4-204ENST00000482519 NOL10Q9BSC4 688 aaKnown RBP20.24■□□□□ 0.83
VAMP4-204ENST00000482519 RPAP1Q9BWH6 1393 aaPredicted RBP20.23■□□□□ 0.83
VAMP4-204ENST00000482519 CAPN15O75808 1086 aa20.23■□□□□ 0.83
VAMP4-204ENST00000482519 CNKSR2Q8WXI2 1034 aa20.23■□□□□ 0.83
VAMP4-204ENST00000482519 IDI2Q9BXS1 227 aa20.23■□□□□ 0.83
VAMP4-204ENST00000482519 ZNF341Q9BYN7 854 aa20.23■□□□□ 0.83
VAMP4-204ENST00000482519 PIH1D3Q9NQM4 214 aaKnown RBP20.23■□□□□ 0.83
VAMP4-204ENST00000482519 MANSC4A6NHS7 340 aaPredicted RBP20.22■□□□□ 0.83
VAMP4-204ENST00000482519 ENTPD3O75355 529 aa20.22■□□□□ 0.83
VAMP4-204ENST00000482519 WDHD1O75717 1129 aaPredicted RBP20.22■□□□□ 0.83
VAMP4-204ENST00000482519 IDH1O75874 414 aaKnown RBP20.22■□□□□ 0.83
VAMP4-204ENST00000482519 TBC1D8O95759 1140 aa20.22■□□□□ 0.83
VAMP4-204ENST00000482519 GJA5P36382 358 aa20.22■□□□□ 0.83
VAMP4-204ENST00000482519 OTUD5Q96G74 571 aa20.22■□□□□ 0.83
VAMP4-204ENST00000482519 MYO5AQ9Y4I1 1855 aaKnown RBP20.22■□□□□ 0.83
VAMP4-204ENST00000482519 DDX4Q9NQI0 724 aaKnown RBP20.21■□□□□ 0.83
VAMP4-204ENST00000482519 INHBEP58166 350 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms