RNA–Protein interactions for RNA: ENST00000481980.1

NUP58-212, Transcript of nucleoporin 58, humanhuman

TSL 3

Gene NUP58, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-212ENST00000481980 ZCCHC17Q9NP64 241 aaKnown RBP20.89■□□□□ 0.93
NUP58-212ENST00000481980 RPAP1Q9BWH6 1393 aaPredicted RBP20.88■□□□□ 0.93
NUP58-212ENST00000481980 IRF6O14896 467 aa20.88■□□□□ 0.93
NUP58-212ENST00000481980 PPIL2Q13356 520 aa20.88■□□□□ 0.93
NUP58-212ENST00000481980 FAM151AQ8WW52 585 aa20.88■□□□□ 0.93
NUP58-212ENST00000481980 ZNF341Q9BYN7 854 aa20.88■□□□□ 0.93
NUP58-212ENST00000481980 SMC4Q9NTJ3 1288 aa20.88■□□□□ 0.93
NUP58-212ENST00000481980 FBXO3Q9UK99 471 aa20.88■□□□□ 0.93
NUP58-212ENST00000481980 BTBD19C9JJ37 291 aa20.87■□□□□ 0.93
NUP58-212ENST00000481980 TLR2O60603 784 aa20.87■□□□□ 0.93
NUP58-212ENST00000481980 CIAO1O76071 339 aa20.87■□□□□ 0.93
NUP58-212ENST00000481980 MIGA2Q7L4E1 593 aa20.87■□□□□ 0.93
NUP58-212ENST00000481980 CDCA7LQ96GN5 454 aa20.87■□□□□ 0.93
NUP58-212ENST00000481980 ZNF333Q96JL9 665 aa20.87■□□□□ 0.93
NUP58-212ENST00000481980 DAGLAQ9Y4D2 1042 aa20.87■□□□□ 0.93
NUP58-212ENST00000481980 UBTFL1P0CB47 393 aaPredicted RBP20.86■□□□□ 0.93
NUP58-212ENST00000481980 EN2P19622 333 aaPredicted RBP20.86■□□□□ 0.93
NUP58-212ENST00000481980 PPATQ06203 517 aa20.86■□□□□ 0.93
NUP58-212ENST00000481980 ATP2B3Q16720 1220 aa20.86■□□□□ 0.93
NUP58-212ENST00000481980 NBPF11Q86T75 865 aa20.86■□□□□ 0.93
NUP58-212ENST00000481980 SIL1Q9H173 461 aa20.86■□□□□ 0.93
NUP58-212ENST00000481980 CEP126Q9P2H0 1117 aa20.86■□□□□ 0.93
NUP58-212ENST00000481980 PTCH2Q9Y6C5 1203 aa20.86■□□□□ 0.93
NUP58-212ENST00000481980 INPP5BP32019 993 aa20.85■□□□□ 0.93
NUP58-212ENST00000481980 DIXDC1Q155Q3 683 aa20.85■□□□□ 0.93
NUP58-212ENST00000481980 SLC9C1Q4G0N8 1177 aa20.85■□□□□ 0.93
NUP58-212ENST00000481980 CDC42EP5Q6NZY7 148 aa20.85■□□□□ 0.93
NUP58-212ENST00000481980 TRMT2AQ8IZ69 625 aaKnown RBP20.85■□□□□ 0.93
NUP58-212ENST00000481980 TMEM106CQ9BVX2 250 aa20.85■□□□□ 0.93
NUP58-212ENST00000481980 GNL3LQ9NVN8 582 aaKnown RBP20.85■□□□□ 0.93
NUP58-212ENST00000481980 ZNF112Q9UJU3 913 aa20.85■□□□□ 0.93
NUP58-212ENST00000481980 RBBP6Q7Z6E9 1792 aaKnown RBP20.85■□□□□ 0.93
NUP58-212ENST00000481980 LDHBP07195 334 aaKnown RBP20.84■□□□□ 0.93
NUP58-212ENST00000481980 PRDX5P30044 214 aa20.84■□□□□ 0.93
NUP58-212ENST00000481980 TCP10Q12799 353 aa20.84■□□□□ 0.93
NUP58-212ENST00000481980 GCC1Q96CN9 775 aa20.84■□□□□ 0.93
NUP58-212ENST00000481980 LACTBP83111 547 aaPredicted RBP20.83■□□□□ 0.93
NUP58-212ENST00000481980 NFIAQ12857 509 aa20.83■□□□□ 0.93
NUP58-212ENST00000481980 KIF22Q14807 665 aa20.83■□□□□ 0.93
NUP58-212ENST00000481980 USP40Q9NVE5 1235 aa20.83■□□□□ 0.93
NUP58-212ENST00000481980 NOB1Q9ULX3 412 aaKnown RBP20.83■□□□□ 0.93
NUP58-212ENST00000481980 SALL1Q9NSC2 1324 aa20.82■□□□□ 0.92
NUP58-212ENST00000481980 SEMA3EO15041 775 aa20.82■□□□□ 0.92
NUP58-212ENST00000481980 CT47B1P0C2W7 299 aaPredicted RBP20.82■□□□□ 0.92
NUP58-212ENST00000481980 IL15P40933 162 aaPredicted RBP20.82■□□□□ 0.92
NUP58-212ENST00000481980 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.82■□□□□ 0.92
NUP58-212ENST00000481980 ARHGAP39Q9C0H5 1083 aa20.82■□□□□ 0.92
NUP58-212ENST00000481980 FAM198AQ9UFP1 575 aa20.82■□□□□ 0.92
NUP58-212ENST00000481980 DENND2AQ9ULE3 1009 aa20.82■□□□□ 0.92
NUP58-212ENST00000481980 HDAC5Q9UQL6 1122 aa20.82■□□□□ 0.92
NUP58-212ENST00000481980 GNRH1P01148 92 aa20.81■□□□□ 0.92
NUP58-212ENST00000481980 PHKA1P46020 1223 aa20.81■□□□□ 0.92
NUP58-212ENST00000481980 C17orf99Q6UX52 265 aa20.81■□□□□ 0.92
NUP58-212ENST00000481980 ANKRD23Q86SG2 305 aa20.81■□□□□ 0.92
NUP58-212ENST00000481980 API5Q9BZZ5 524 aaKnown RBP20.81■□□□□ 0.92
NUP58-212ENST00000481980 KCNH4Q9UQ05 1017 aa20.81■□□□□ 0.92
NUP58-212ENST00000481980 LRRFIP2Q9Y608 721 aaKnown RBP20.81■□□□□ 0.92
NUP58-212ENST00000481980 MYH13Q9UKX3 1938 aa20.8■□□□□ 0.92
NUP58-212ENST00000481980 ZBTB22O15209 634 aa20.8■□□□□ 0.92
NUP58-212ENST00000481980 NOL9Q5SY16 702 aaKnown RBP20.8■□□□□ 0.92
NUP58-212ENST00000481980 COPRSQ9NQ92 184 aa20.8■□□□□ 0.92
NUP58-212ENST00000481980 PA2G4Q9UQ80 394 aaKnown RBP20.8■□□□□ 0.92
NUP58-212ENST00000481980 PDHXO00330 501 aa20.79■□□□□ 0.92
NUP58-212ENST00000481980 PRMT2P55345 433 aa20.79■□□□□ 0.92
NUP58-212ENST00000481980 SLC4A8Q2Y0W8 1093 aa20.79■□□□□ 0.92
NUP58-212ENST00000481980 ZFPM1Q8IX07 1006 aa20.79■□□□□ 0.92
NUP58-212ENST00000481980 SH3TC2Q8TF17 1288 aa20.79■□□□□ 0.92
NUP58-212ENST00000481980 ADORA1P30542 326 aa20.78■□□□□ 0.92
NUP58-212ENST00000481980 MOGSQ13724 837 aa20.78■□□□□ 0.92
NUP58-212ENST00000481980 CCDC102BQ68D86 513 aa20.78■□□□□ 0.92
NUP58-212ENST00000481980 CPA4Q9UI42 421 aa20.78■□□□□ 0.92
NUP58-212ENST00000481980 ZGPATQ8N5A5 531 aaKnown RBP20.77■□□□□ 0.92
NUP58-212ENST00000481980 MEIS3Q99687 375 aa20.77■□□□□ 0.92
NUP58-212ENST00000481980 CXCL11O14625 94 aa20.76■□□□□ 0.91
NUP58-212ENST00000481980 MYCP01106 439 aaPredicted RBP20.76■□□□□ 0.91
NUP58-212ENST00000481980 PSMC4P43686 418 aa20.76■□□□□ 0.91
NUP58-212ENST00000481980 RGS3P49796 1198 aa20.76■□□□□ 0.91
NUP58-212ENST00000481980 HABP4Q5JVS0 413 aaKnown RBP20.76■□□□□ 0.91
NUP58-212ENST00000481980 TRIM47Q96LD4 638 aa20.76■□□□□ 0.91
NUP58-212ENST00000481980 IDI2Q9BXS1 227 aa20.76■□□□□ 0.91
NUP58-212ENST00000481980 GAKO14976 1311 aa20.76■□□□□ 0.91
NUP58-212ENST00000481980 ADGRA2Q96PE1 1338 aa20.76■□□□□ 0.91
NUP58-212ENST00000481980 ATRNL1Q5VV63 1379 aa20.75■□□□□ 0.91
NUP58-212ENST00000481980 CEP290O15078 2479 aa20.75■□□□□ 0.91
NUP58-212ENST00000481980 PHF20L1A8MW92 1017 aa20.75■□□□□ 0.91
NUP58-212ENST00000481980 ENTPD3O75355 529 aa20.75■□□□□ 0.91
NUP58-212ENST00000481980 CTGFP29279 349 aa20.75■□□□□ 0.91
NUP58-212ENST00000481980 TIMM10P62072 90 aa20.75■□□□□ 0.91
NUP58-212ENST00000481980 RASGRF1Q13972 1273 aa20.75■□□□□ 0.91
NUP58-212ENST00000481980 SRRDQ9UH36 339 aa20.75■□□□□ 0.91
NUP58-212ENST00000481980 ZSWIM8A7E2V4 1837 aa20.75■□□□□ 0.91
NUP58-212ENST00000481980 AK9Q5TCS8 1911 aa20.74■□□□□ 0.91
NUP58-212ENST00000481980 ECM2O94769 699 aaPredicted RBP20.74■□□□□ 0.91
NUP58-212ENST00000481980 GPAT2Q6NUI2 795 aa20.74■□□□□ 0.91
NUP58-212ENST00000481980 DZIP1Q86YF9 867 aaKnown RBP20.74■□□□□ 0.91
NUP58-212ENST00000481980 SLF2Q8IX21 1173 aa20.74■□□□□ 0.91
NUP58-212ENST00000481980 FAM163AQ96GL9 167 aaPredicted RBP20.74■□□□□ 0.91
NUP58-212ENST00000481980 PDS5AQ29RF7 1337 aaKnown RBP20.74■□□□□ 0.91
NUP58-212ENST00000481980 FMNL1O95466 1100 aaPredicted RBP20.73■□□□□ 0.91
NUP58-212ENST00000481980 HOXD10P28358 340 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms