RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 COA1Q9GZY4 146 aa5.26□□□□□ -1.57
VPS13D-208ENST00000481484 PHAXQ9H814 394 aaKnown RBP5.26□□□□□ -1.57
VPS13D-208ENST00000481484 GPCPD1Q9NPB8 672 aa5.26□□□□□ -1.57
VPS13D-208ENST00000481484 GGA3Q9NZ52 723 aa5.26□□□□□ -1.57
VPS13D-208ENST00000481484 LEMD3Q9Y2U8 911 aa5.26□□□□□ -1.57
VPS13D-208ENST00000481484 SALL2Q9Y467 1007 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-208ENST00000481484 HTTP42858 3142 aa5.26□□□□□ -1.57
VPS13D-208ENST00000481484 USP17L3A6NCW0 530 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 USP17L4A6NCW7 530 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 TRAF5O00463 557 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 ELL2O00472 640 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-208ENST00000481484 ALDH1L1O75891 902 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 USP17L8P0C7I0 530 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 NF2P35240 595 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 CLCN1P35523 988 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 KCNJ4P48050 445 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 CCT4P50991 539 aaKnown RBP5.25□□□□□ -1.57
VPS13D-208ENST00000481484 HUNKP57058 714 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 RTL5Q5HYW3 569 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-208ENST00000481484 STRIP1Q5VSL9 837 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 USP17L1Q7RTZ2 530 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 SLC51AQ86UW1 340 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 APOBEC3FQ8IUX4 373 aaKnown RBP5.25□□□□□ -1.57
VPS13D-208ENST00000481484 OGFOD1Q8N543 542 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 C2orf69Q8N8R5 385 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 ANKLE1Q8NAG6 615 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 TTLL11Q8NHH1 800 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 GPR101Q96P66 508 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-208ENST00000481484 MPHOSPH8Q99549 860 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 REPIN1Q9BWE0 567 aaKnown RBP5.25□□□□□ -1.57
VPS13D-208ENST00000481484 GLIS2Q9BZE0 524 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-208ENST00000481484 GREM2Q9H772 168 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 GBA2Q9HCG7 927 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-208ENST00000481484 FAM217BQ9NTX9 383 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-208ENST00000481484 HDAC9Q9UKV0 1011 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 SLC27A5Q9Y2P5 690 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 PPP2R3BQ9Y5P8 575 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 CEP290O15078 2479 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 DOCK2Q92608 1830 aa5.25□□□□□ -1.57
VPS13D-208ENST00000481484 PTPRCP08575 1304 aa5.24□□□□□ -1.57
VPS13D-208ENST00000481484 MAST2Q6P0Q8 1798 aa5.24□□□□□ -1.57
VPS13D-208ENST00000481484 KIAA0100Q14667 2235 aaKnown RBP5.24□□□□□ -1.57
VPS13D-208ENST00000481484 ANKRD18BA2A2Z9 1011 aa5.24□□□□□ -1.57
VPS13D-208ENST00000481484 H7C1W4 665 aa5.24□□□□□ -1.57
VPS13D-208ENST00000481484 S1PR4O95977 384 aa5.24□□□□□ -1.57
VPS13D-208ENST00000481484 ITGA6P23229 1130 aa5.24□□□□□ -1.57
VPS13D-208ENST00000481484 CASP7P55210 303 aa5.24□□□□□ -1.57
VPS13D-208ENST00000481484 FKBP1AP62942 108 aaKnown RBP5.24□□□□□ -1.57
VPS13D-208ENST00000481484 IFIT5Q13325 482 aaKnown RBP5.24□□□□□ -1.57
VPS13D-208ENST00000481484 TBC1D10BQ4KMP7 808 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-208ENST00000481484 CST9Q5W186 159 aa5.24□□□□□ -1.57
VPS13D-208ENST00000481484 CYP4F22Q6NT55 531 aa5.24□□□□□ -1.57
VPS13D-208ENST00000481484 RGMBQ6NW40 437 aa5.24□□□□□ -1.57
VPS13D-208ENST00000481484 BRICD5Q6PL45 260 aa5.24□□□□□ -1.57
VPS13D-208ENST00000481484 C15orf52Q6ZUT6 534 aaKnown RBP5.24□□□□□ -1.57
VPS13D-208ENST00000481484 ZNF804AQ7Z570 1209 aa5.24□□□□□ -1.57
VPS13D-208ENST00000481484 TSPYL6Q8N831 410 aa5.24□□□□□ -1.57
VPS13D-208ENST00000481484 EMID1Q96A84 441 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-208ENST00000481484 GMLQ99445 158 aa5.24□□□□□ -1.57
VPS13D-208ENST00000481484 SPSB2Q99619 263 aa5.24□□□□□ -1.57
VPS13D-208ENST00000481484 SLC6A16Q9GZN6 736 aa5.24□□□□□ -1.57
VPS13D-208ENST00000481484 ZNF408Q9H9D4 720 aa5.24□□□□□ -1.57
VPS13D-208ENST00000481484 MYOZ2Q9NPC6 264 aa5.24□□□□□ -1.57
VPS13D-208ENST00000481484 SEC31BQ9NQW1 1179 aa5.24□□□□□ -1.57
VPS13D-208ENST00000481484 MINPP1Q9UNW1 487 aa5.24□□□□□ -1.57
VPS13D-208ENST00000481484 ZNF804BA4D1E1 1349 aa5.23□□□□□ -1.57
VPS13D-208ENST00000481484 ZNF521Q96K83 1311 aa5.23□□□□□ -1.57
VPS13D-208ENST00000481484 KIF16BQ96L93 1317 aa5.23□□□□□ -1.57
VPS13D-208ENST00000481484 TNRC18O15417 2968 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-208ENST00000481484 UNCXA6NJT0 531 aa5.23□□□□□ -1.57
VPS13D-208ENST00000481484 GRM8O00222 908 aa5.23□□□□□ -1.57
VPS13D-208ENST00000481484 KDM4AO75164 1064 aa5.23□□□□□ -1.57
VPS13D-208ENST00000481484 FMNL1O95466 1100 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-208ENST00000481484 CSF1RP07333 972 aa5.23□□□□□ -1.57
VPS13D-208ENST00000481484 CT47B1P0C2W7 299 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-208ENST00000481484 LBX1P52954 281 aa5.23□□□□□ -1.57
VPS13D-208ENST00000481484 HIRAP54198 1017 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-208ENST00000481484 TNFAIP1Q13829 316 aa5.23□□□□□ -1.57
VPS13D-208ENST00000481484 AMHR2Q16671 573 aa5.23□□□□□ -1.57
VPS13D-208ENST00000481484 CWF19L2Q2TBE0 894 aaKnown RBP5.23□□□□□ -1.57
VPS13D-208ENST00000481484 NOM1Q5C9Z4 860 aaKnown RBP5.23□□□□□ -1.57
VPS13D-208ENST00000481484 TAF7LQ5H9L4 462 aa5.23□□□□□ -1.57
VPS13D-208ENST00000481484 DACT2Q5SW24 774 aa5.23□□□□□ -1.57
VPS13D-208ENST00000481484 FAM160A2Q8N612 972 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-208ENST00000481484 CDCA5Q96FF9 252 aa5.23□□□□□ -1.57
VPS13D-208ENST00000481484 RPAP1Q9BWH6 1393 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-208ENST00000481484 MAST3O60307 1309 aa5.23□□□□□ -1.57
VPS13D-208ENST00000481484 ADM5C9JUS6 153 aa5.22□□□□□ -1.57
VPS13D-208ENST00000481484 E9PSI1 815 aa5.22□□□□□ -1.57
VPS13D-208ENST00000481484 MYO1BO43795 1136 aa5.22□□□□□ -1.57
VPS13D-208ENST00000481484 VAMP4O75379 141 aa5.22□□□□□ -1.57
VPS13D-208ENST00000481484 SLC19A1P41440 591 aa5.22□□□□□ -1.57
VPS13D-208ENST00000481484 ZNF157P51786 506 aaPredicted RBP5.22□□□□□ -1.57
VPS13D-208ENST00000481484 USP46P62068 366 aa5.22□□□□□ -1.57
VPS13D-208ENST00000481484 EXOSC9Q06265 439 aaKnown RBP5.22□□□□□ -1.57
VPS13D-208ENST00000481484 CHRNDQ07001 517 aa5.22□□□□□ -1.57
VPS13D-208ENST00000481484 SREBF2Q12772 1141 aa5.22□□□□□ -1.57
VPS13D-208ENST00000481484 GRM1Q13255 1194 aa5.22□□□□□ -1.57
VPS13D-208ENST00000481484 LAPTM4AQ15012 233 aa5.22□□□□□ -1.57
VPS13D-208ENST00000481484 CCDC57Q2TAC2 916 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms