RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 EAF2Q96CJ1 260 aaPredicted RBP16.03■□□□□ 0.16
HDAC1-207ENST00000481281 YTHDC1Q96MU7 727 aaKnown RBP16.03■□□□□ 0.16
HDAC1-207ENST00000481281 BEGAINQ9BUH8 593 aa16.03■□□□□ 0.16
HDAC1-207ENST00000481281 TMEM39BQ9GZU3 492 aa16.03■□□□□ 0.16
HDAC1-207ENST00000481281 PRDM10Q9NQV6 1147 aa16.03■□□□□ 0.16
HDAC1-207ENST00000481281 ABCF2Q9UG63 623 aa16.03■□□□□ 0.16
HDAC1-207ENST00000481281 UNCXA6NJT0 531 aa16.02■□□□□ 0.16
HDAC1-207ENST00000481281 CCDC158Q5M9N0 1113 aa16.02■□□□□ 0.16
HDAC1-207ENST00000481281 CDC42EP5Q6NZY7 148 aa16.02■□□□□ 0.16
HDAC1-207ENST00000481281 DZIP1Q86YF9 867 aaKnown RBP16.02■□□□□ 0.16
HDAC1-207ENST00000481281 FAM163AQ96GL9 167 aaPredicted RBP16.02■□□□□ 0.16
HDAC1-207ENST00000481281 TLR7Q9NYK1 1049 aaKnown RBP16.02■□□□□ 0.16
HDAC1-207ENST00000481281 RFX7Q2KHR2 1363 aa16.01■□□□□ 0.15
HDAC1-207ENST00000481281 USP2O75604 605 aaPredicted RBP16.01■□□□□ 0.15
HDAC1-207ENST00000481281 LBX1P52954 281 aa16.01■□□□□ 0.15
HDAC1-207ENST00000481281 MECOMQ03112 1051 aa16.01■□□□□ 0.15
HDAC1-207ENST00000481281 TTC39AQ5SRH9 613 aa16.01■□□□□ 0.15
HDAC1-207ENST00000481281 ERICH6Q7L0X2 663 aa16.01■□□□□ 0.15
HDAC1-207ENST00000481281 RHPN1Q8TCX5 695 aa16.01■□□□□ 0.15
HDAC1-207ENST00000481281 ZNF384Q8TF68 577 aa16.01■□□□□ 0.15
HDAC1-207ENST00000481281 MYO5AQ9Y4I1 1855 aaKnown RBP16.01■□□□□ 0.15
HDAC1-207ENST00000481281 MROH7-TTC4A0A0A0MT08 1334 aa16■□□□□ 0.15
HDAC1-207ENST00000481281 IREB2P48200 963 aaKnown RBP16■□□□□ 0.15
HDAC1-207ENST00000481281 TBC1D9Q6ZT07 1266 aa16■□□□□ 0.15
HDAC1-207ENST00000481281 SLF2Q8IX21 1173 aa16■□□□□ 0.15
HDAC1-207ENST00000481281 REM2Q8IYK8 340 aaPredicted RBP16■□□□□ 0.15
HDAC1-207ENST00000481281 CLMNQ96JQ2 1002 aa16■□□□□ 0.15
HDAC1-207ENST00000481281 CSRNP1Q96S65 589 aa16■□□□□ 0.15
HDAC1-207ENST00000481281 CCDC8Q9H0W5 538 aaPredicted RBP16■□□□□ 0.15
HDAC1-207ENST00000481281 DOCK2Q92608 1830 aa15.99■□□□□ 0.15
HDAC1-207ENST00000481281 RRP1P56182 461 aaKnown RBP15.99■□□□□ 0.15
HDAC1-207ENST00000481281 NFIAQ12857 509 aa15.99■□□□□ 0.15
HDAC1-207ENST00000481281 ANKRD13AQ8IZ07 590 aa15.99■□□□□ 0.15
HDAC1-207ENST00000481281 FAM151AQ8WW52 585 aa15.99■□□□□ 0.15
HDAC1-207ENST00000481281 NSUN4Q96CB9 384 aaKnown RBP15.99■□□□□ 0.15
HDAC1-207ENST00000481281 KIF1BPQ96EK5 621 aa15.99■□□□□ 0.15
HDAC1-207ENST00000481281 USP40Q9NVE5 1235 aa15.99■□□□□ 0.15
HDAC1-207ENST00000481281 SAGE1Q9NXZ1 904 aa15.99■□□□□ 0.15
HDAC1-207ENST00000481281 GPR75-ASB3A0A0A6YYF3 556 aa15.98■□□□□ 0.15
HDAC1-207ENST00000481281 SPRYD7Q5W111 196 aa15.98■□□□□ 0.15
HDAC1-207ENST00000481281 AACSQ86V21 672 aa15.98■□□□□ 0.15
HDAC1-207ENST00000481281 IDI2Q9BXS1 227 aa15.98■□□□□ 0.15
HDAC1-207ENST00000481281 IL1RAPL2Q9NP60 686 aa15.98■□□□□ 0.15
HDAC1-207ENST00000481281 SNRKQ9NRH2 765 aa15.98■□□□□ 0.15
HDAC1-207ENST00000481281 FAM198AQ9UFP1 575 aa15.98■□□□□ 0.15
HDAC1-207ENST00000481281 IGSF3O75054 1194 aa15.97■□□□□ 0.15
HDAC1-207ENST00000481281 RAB11FIP3O75154 756 aa15.97■□□□□ 0.15
HDAC1-207ENST00000481281 CYP2E1P05181 493 aaPredicted RBP15.97■□□□□ 0.15
HDAC1-207ENST00000481281 ZBTB48P10074 688 aaPredicted RBP15.97■□□□□ 0.15
HDAC1-207ENST00000481281 BTDP43251 543 aa15.97■□□□□ 0.15
HDAC1-207ENST00000481281 GSTO1P78417 241 aa15.97■□□□□ 0.15
HDAC1-207ENST00000481281 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.97■□□□□ 0.15
HDAC1-207ENST00000481281 HOOK2Q96ED9 719 aa15.97■□□□□ 0.15
HDAC1-207ENST00000481281 SLC10A4Q96EP9 437 aa15.97■□□□□ 0.15
HDAC1-207ENST00000481281 RAI14Q9P0K7 980 aa15.97■□□□□ 0.15
HDAC1-207ENST00000481281 LRP2BPQ9P2M1 347 aa15.97■□□□□ 0.15
HDAC1-207ENST00000481281 TSKSQ9UJT2 592 aa15.97■□□□□ 0.15
HDAC1-207ENST00000481281 AK9Q5TCS8 1911 aa15.97■□□□□ 0.15
HDAC1-207ENST00000481281 ENTPD3O75355 529 aa15.96■□□□□ 0.15
HDAC1-207ENST00000481281 LDHCP07864 332 aa15.96■□□□□ 0.15
HDAC1-207ENST00000481281 ZAP70P43403 619 aa15.96■□□□□ 0.15
HDAC1-207ENST00000481281 RHBDL3P58872 404 aa15.96■□□□□ 0.15
HDAC1-207ENST00000481281 TCP10Q12799 353 aa15.96■□□□□ 0.15
HDAC1-207ENST00000481281 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.96■□□□□ 0.15
HDAC1-207ENST00000481281 CLASRPQ8N2M8 674 aaKnown RBP15.96■□□□□ 0.15
HDAC1-207ENST00000481281 WNK4Q96J92 1243 aa15.96■□□□□ 0.15
HDAC1-207ENST00000481281 RNF186Q9NXI6 227 aa15.96■□□□□ 0.15
HDAC1-207ENST00000481281 CDK5RAP2Q96SN8 1893 aa15.95■□□□□ 0.14
HDAC1-207ENST00000481281 WDHD1O75717 1129 aaPredicted RBP15.95■□□□□ 0.14
HDAC1-207ENST00000481281 TM4SF4P48230 202 aa15.95■□□□□ 0.14
HDAC1-207ENST00000481281 RGS3P49796 1198 aa15.95■□□□□ 0.14
HDAC1-207ENST00000481281 MKRN3Q13064 507 aaKnown RBP15.95■□□□□ 0.14
HDAC1-207ENST00000481281 VGLL4Q14135 290 aa15.95■□□□□ 0.14
HDAC1-207ENST00000481281 FOCADQ5VW36 1801 aa15.95■□□□□ 0.14
HDAC1-207ENST00000481281 ATRNL1Q5VV63 1379 aa15.95■□□□□ 0.14
HDAC1-207ENST00000481281 APBB1O00213 710 aa15.94■□□□□ 0.14
HDAC1-207ENST00000481281 NPM3O75607 178 aaKnown RBP15.94■□□□□ 0.14
HDAC1-207ENST00000481281 MAP4K4O95819 1239 aaPredicted RBP15.94■□□□□ 0.14
HDAC1-207ENST00000481281 GJA5P36382 358 aa15.94■□□□□ 0.14
HDAC1-207ENST00000481281 MAP3K9P80192 1104 aa15.94■□□□□ 0.14
HDAC1-207ENST00000481281 SREBF2Q12772 1141 aa15.94■□□□□ 0.14
HDAC1-207ENST00000481281 DCAF15Q66K64 600 aa15.94■□□□□ 0.14
HDAC1-207ENST00000481281 ZFPM1Q8IX07 1006 aa15.94■□□□□ 0.14
HDAC1-207ENST00000481281 TNS4Q8IZW8 715 aa15.94■□□□□ 0.14
HDAC1-207ENST00000481281 DDX4Q9NQI0 724 aaKnown RBP15.94■□□□□ 0.14
HDAC1-207ENST00000481281 PIH1D3Q9NQM4 214 aaKnown RBP15.94■□□□□ 0.14
HDAC1-207ENST00000481281 CASP8AP2Q9UKL3 1982 aa15.94■□□□□ 0.14
HDAC1-207ENST00000481281 COL2A1P02458 1487 aaPredicted RBP15.93■□□□□ 0.14
HDAC1-207ENST00000481281 MANSC4A6NHS7 340 aaPredicted RBP15.93■□□□□ 0.14
HDAC1-207ENST00000481281 TRPA1O75762 1119 aa15.93■□□□□ 0.14
HDAC1-207ENST00000481281 NAA16Q6N069 864 aaPredicted RBP15.93■□□□□ 0.14
HDAC1-207ENST00000481281 WRNIP1Q96S55 665 aa15.93■□□□□ 0.14
HDAC1-207ENST00000481281 ZNF341Q9BYN7 854 aa15.93■□□□□ 0.14
HDAC1-207ENST00000481281 ELP3Q9H9T3 547 aa15.93■□□□□ 0.14
HDAC1-207ENST00000481281 IFIT2P09913 472 aaKnown RBP15.92■□□□□ 0.14
HDAC1-207ENST00000481281 IFFO2Q5TF58 517 aa15.92■□□□□ 0.14
HDAC1-207ENST00000481281 MIGA2Q7L4E1 593 aa15.92■□□□□ 0.14
HDAC1-207ENST00000481281 SH3BP5LQ7L8J4 393 aa15.92■□□□□ 0.14
HDAC1-207ENST00000481281 ADGRA1Q86SQ6 560 aa15.92■□□□□ 0.14
HDAC1-207ENST00000481281 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms