RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 TBC1D9Q6ZT07 1266 aa24.72■■□□□ 1.55
VPS36-204ENST00000480923 CDAN1Q8IWY9 1227 aa24.72■■□□□ 1.55
VPS36-204ENST00000480923 TEPSINQ96N21 525 aa24.72■■□□□ 1.55
VPS36-204ENST00000480923 SNRKQ9NRH2 765 aa24.72■■□□□ 1.55
VPS36-204ENST00000480923 DBNLQ9UJU6 430 aaKnown RBP24.72■■□□□ 1.55
VPS36-204ENST00000480923 HSPA8P11142 646 aaKnown RBP24.71■■□□□ 1.55
VPS36-204ENST00000480923 IREB2P48200 963 aaKnown RBP24.71■■□□□ 1.55
VPS36-204ENST00000480923 LBX1P52954 281 aa24.71■■□□□ 1.55
VPS36-204ENST00000480923 MAP3K11Q16584 847 aa24.71■■□□□ 1.55
VPS36-204ENST00000480923 FAM83AQ86UY5 434 aa24.71■■□□□ 1.55
VPS36-204ENST00000480923 AACSQ86V21 672 aa24.71■■□□□ 1.55
VPS36-204ENST00000480923 RHPN1Q8TCX5 695 aa24.71■■□□□ 1.55
VPS36-204ENST00000480923 IL1RAPL2Q9NP60 686 aa24.71■■□□□ 1.55
VPS36-204ENST00000480923 USP40Q9NVE5 1235 aa24.71■■□□□ 1.55
VPS36-204ENST00000480923 RAI14Q9P0K7 980 aa24.71■■□□□ 1.55
VPS36-204ENST00000480923 MECOMQ03112 1051 aa24.7■■□□□ 1.54
VPS36-204ENST00000480923 GAKO14976 1311 aa24.69■■□□□ 1.54
VPS36-204ENST00000480923 CA12O43570 354 aa24.69■■□□□ 1.54
VPS36-204ENST00000480923 USP2O75604 605 aaPredicted RBP24.69■■□□□ 1.54
VPS36-204ENST00000480923 RRP1P56182 461 aaKnown RBP24.69■■□□□ 1.54
VPS36-204ENST00000480923 MKRN3Q13064 507 aaKnown RBP24.69■■□□□ 1.54
VPS36-204ENST00000480923 KIF1BPQ96EK5 621 aa24.69■■□□□ 1.54
VPS36-204ENST00000480923 SLC10A4Q96EP9 437 aa24.69■■□□□ 1.54
VPS36-204ENST00000480923 LRP2BPQ9P2M1 347 aa24.69■■□□□ 1.54
VPS36-204ENST00000480923 TSKSQ9UJT2 592 aa24.69■■□□□ 1.54
VPS36-204ENST00000480923 ZNF512BQ96KM6 892 aaPredicted RBP24.68■■□□□ 1.54
VPS36-204ENST00000480923 CSRNP1Q96S65 589 aa24.68■■□□□ 1.54
VPS36-204ENST00000480923 BCL11AQ9H165 835 aa24.68■■□□□ 1.54
VPS36-204ENST00000480923 PRDM10Q9NQV6 1147 aa24.68■■□□□ 1.54
VPS36-204ENST00000480923 MROH7-TTC4A0A0A0MT08 1334 aa24.67■■□□□ 1.54
VPS36-204ENST00000480923 GSTO1P78417 241 aa24.67■■□□□ 1.54
VPS36-204ENST00000480923 CLASRPQ8N2M8 674 aaKnown RBP24.67■■□□□ 1.54
VPS36-204ENST00000480923 FAM163AQ96GL9 167 aaPredicted RBP24.67■■□□□ 1.54
VPS36-204ENST00000480923 CLMNQ96JQ2 1002 aa24.67■■□□□ 1.54
VPS36-204ENST00000480923 RAB11FIP3O75154 756 aa24.66■■□□□ 1.54
VPS36-204ENST00000480923 LDHCP07864 332 aa24.66■■□□□ 1.54
VPS36-204ENST00000480923 BTDP43251 543 aa24.66■■□□□ 1.54
VPS36-204ENST00000480923 TCP10Q12799 353 aa24.66■■□□□ 1.54
VPS36-204ENST00000480923 NFIAQ12857 509 aa24.66■■□□□ 1.54
VPS36-204ENST00000480923 REM2Q8IYK8 340 aaPredicted RBP24.66■■□□□ 1.54
VPS36-204ENST00000480923 ANKRD13AQ8IZ07 590 aa24.66■■□□□ 1.54
VPS36-204ENST00000480923 FAM151AQ8WW52 585 aa24.66■■□□□ 1.54
VPS36-204ENST00000480923 NSUN4Q96CB9 384 aaKnown RBP24.66■■□□□ 1.54
VPS36-204ENST00000480923 HOOK2Q96ED9 719 aa24.66■■□□□ 1.54
VPS36-204ENST00000480923 UNCXA6NJT0 531 aa24.65■■□□□ 1.54
VPS36-204ENST00000480923 ZAP70P43403 619 aa24.65■■□□□ 1.54
VPS36-204ENST00000480923 RPAP1Q9BWH6 1393 aaPredicted RBP24.65■■□□□ 1.54
VPS36-204ENST00000480923 SPRYD7Q5W111 196 aa24.64■■□□□ 1.54
VPS36-204ENST00000480923 ZNF384Q8TF68 577 aa24.64■■□□□ 1.54
VPS36-204ENST00000480923 FAM198AQ9UFP1 575 aa24.64■■□□□ 1.54
VPS36-204ENST00000480923 GPR75-ASB3A0A0A6YYF3 556 aa24.63■■□□□ 1.53
VPS36-204ENST00000480923 CYP2E1P05181 493 aaPredicted RBP24.63■■□□□ 1.53
VPS36-204ENST00000480923 IFIT2P09913 472 aaKnown RBP24.63■■□□□ 1.53
VPS36-204ENST00000480923 TRPA1O75762 1119 aa24.62■■□□□ 1.53
VPS36-204ENST00000480923 RGS3P49796 1198 aa24.62■■□□□ 1.53
VPS36-204ENST00000480923 DCAF15Q66K64 600 aa24.62■■□□□ 1.53
VPS36-204ENST00000480923 TNS4Q8IZW8 715 aa24.62■■□□□ 1.53
VPS36-204ENST00000480923 WNK4Q96J92 1243 aa24.62■■□□□ 1.53
VPS36-204ENST00000480923 IDI2Q9BXS1 227 aa24.62■■□□□ 1.53
VPS36-204ENST00000480923 RNF186Q9NXI6 227 aa24.62■■□□□ 1.53
VPS36-204ENST00000480923 MAP3K9P80192 1104 aa24.61■■□□□ 1.53
VPS36-204ENST00000480923 NAA16Q6N069 864 aaPredicted RBP24.61■■□□□ 1.53
VPS36-204ENST00000480923 MIGA2Q7L4E1 593 aa24.61■■□□□ 1.53
VPS36-204ENST00000480923 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.61■■□□□ 1.53
VPS36-204ENST00000480923 ELP3Q9H9T3 547 aa24.61■■□□□ 1.53
VPS36-204ENST00000480923 PIH1D3Q9NQM4 214 aaKnown RBP24.61■■□□□ 1.53
VPS36-204ENST00000480923 SAGE1Q9NXZ1 904 aa24.61■■□□□ 1.53
VPS36-204ENST00000480923 CSADQ9Y600 493 aa24.61■■□□□ 1.53
VPS36-204ENST00000480923 ENTPD3O75355 529 aa24.6■■□□□ 1.53
VPS36-204ENST00000480923 SREBF2Q12772 1141 aa24.6■■□□□ 1.53
VPS36-204ENST00000480923 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.6■■□□□ 1.53
VPS36-204ENST00000480923 ZFPM1Q8IX07 1006 aa24.6■■□□□ 1.53
VPS36-204ENST00000480923 NOL10Q9BSC4 688 aaKnown RBP24.6■■□□□ 1.53
VPS36-204ENST00000480923 MYH2Q9UKX2 1941 aa24.6■■□□□ 1.53
VPS36-204ENST00000480923 ZBTB48P10074 688 aaPredicted RBP24.59■■□□□ 1.53
VPS36-204ENST00000480923 PICALMQ13492 652 aa24.59■■□□□ 1.53
VPS36-204ENST00000480923 VGLL4Q14135 290 aa24.59■■□□□ 1.53
VPS36-204ENST00000480923 WRNIP1Q96S55 665 aa24.59■■□□□ 1.53
VPS36-204ENST00000480923 ZNF341Q9BYN7 854 aa24.59■■□□□ 1.53
VPS36-204ENST00000480923 NDUFB9Q9Y6M9 179 aa24.59■■□□□ 1.53
VPS36-204ENST00000480923 WDHD1O75717 1129 aaPredicted RBP24.58■■□□□ 1.53
VPS36-204ENST00000480923 TM4SF4P48230 202 aa24.58■■□□□ 1.53
VPS36-204ENST00000480923 RHBDL3P58872 404 aa24.58■■□□□ 1.53
VPS36-204ENST00000480923 ZSCAN29Q8IWY8 852 aaPredicted RBP24.58■■□□□ 1.53
VPS36-204ENST00000480923 LRRCC1Q9C099 1032 aa24.58■■□□□ 1.53
VPS36-204ENST00000480923 DDX4Q9NQI0 724 aaKnown RBP24.58■■□□□ 1.53
VPS36-204ENST00000480923 RFX7Q2KHR2 1363 aa24.57■■□□□ 1.52
VPS36-204ENST00000480923 MANSC4A6NHS7 340 aaPredicted RBP24.57■■□□□ 1.52
VPS36-204ENST00000480923 IDH1O75874 414 aaKnown RBP24.57■■□□□ 1.52
VPS36-204ENST00000480923 OPTNQ96CV9 577 aa24.57■■□□□ 1.52
VPS36-204ENST00000480923 CRBNQ96SW2 442 aa24.57■■□□□ 1.52
VPS36-204ENST00000480923 IGSF3O75054 1194 aa24.56■■□□□ 1.52
VPS36-204ENST00000480923 BAG3O95817 575 aa24.56■■□□□ 1.52
VPS36-204ENST00000480923 MAP4K4O95819 1239 aaPredicted RBP24.56■■□□□ 1.52
VPS36-204ENST00000480923 GJA5P36382 358 aa24.56■■□□□ 1.52
VPS36-204ENST00000480923 ANTXR1Q9H6X2 564 aa24.56■■□□□ 1.52
VPS36-204ENST00000480923 AATFQ9NY61 560 aaKnown RBP eCLIP24.56■■□□□ 1.52
VPS36-204ENST00000480923 AKAP11Q9UKA4 1901 aa24.55■■□□□ 1.52
VPS36-204ENST00000480923 SMARCA5O60264 1052 aaPredicted RBP24.55■■□□□ 1.52
VPS36-204ENST00000480923 TEX11Q8IYF3 940 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms