RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 GPR25O00155 361 aa14.09□□□□□ -0.15
CCM2-213ENST00000480658 LDHCP07864 332 aa14.09□□□□□ -0.15
CCM2-213ENST00000480658 PRDX5P30044 214 aa14.09□□□□□ -0.15
CCM2-213ENST00000480658 RASGRF1Q13972 1273 aa14.09□□□□□ -0.15
CCM2-213ENST00000480658 HSP90AB4PQ58FF6 505 aa14.09□□□□□ -0.15
CCM2-213ENST00000480658 CCDC158Q5M9N0 1113 aa14.09□□□□□ -0.15
CCM2-213ENST00000480658 ERC1Q8IUD2 1116 aa14.09□□□□□ -0.15
CCM2-213ENST00000480658 OPTNQ96CV9 577 aa14.09□□□□□ -0.15
CCM2-213ENST00000480658 FAM163AQ96GL9 167 aaPredicted RBP14.09□□□□□ -0.15
CCM2-213ENST00000480658 NEUROD6Q96NK8 337 aa14.09□□□□□ -0.15
CCM2-213ENST00000480658 DAGLAQ9Y4D2 1042 aa14.09□□□□□ -0.15
CCM2-213ENST00000480658 TESPA1A2RU30 521 aaPredicted RBP14.08□□□□□ -0.16
CCM2-213ENST00000480658 SPDYE5A6NIY4 337 aa14.08□□□□□ -0.16
CCM2-213ENST00000480658 CCDC85CA6NKD9 419 aa14.08□□□□□ -0.16
CCM2-213ENST00000480658 FKTNO75072 461 aa14.08□□□□□ -0.16
CCM2-213ENST00000480658 ENTPD3O75355 529 aa14.08□□□□□ -0.16
CCM2-213ENST00000480658 ARID4AP29374 1257 aaPredicted RBP14.08□□□□□ -0.16
CCM2-213ENST00000480658 MKRN3Q13064 507 aaKnown RBP14.08□□□□□ -0.16
CCM2-213ENST00000480658 VGLL4Q14135 290 aa14.08□□□□□ -0.16
CCM2-213ENST00000480658 ERICH6Q7L0X2 663 aa14.08□□□□□ -0.16
CCM2-213ENST00000480658 ERO1BQ86YB8 467 aa14.08□□□□□ -0.16
CCM2-213ENST00000480658 CERS3Q8IU89 383 aa14.08□□□□□ -0.16
CCM2-213ENST00000480658 SSH3Q8TE77 659 aa14.08□□□□□ -0.16
CCM2-213ENST00000480658 WRNIP1Q96S55 665 aa14.08□□□□□ -0.16
CCM2-213ENST00000480658 NOL10Q9BSC4 688 aaKnown RBP14.08□□□□□ -0.16
CCM2-213ENST00000480658 IDI2Q9BXS1 227 aa14.08□□□□□ -0.16
CCM2-213ENST00000480658 ABCF2Q9UG63 623 aa14.08□□□□□ -0.16
CCM2-213ENST00000480658 GAKO14976 1311 aa14.08□□□□□ -0.16
CCM2-213ENST00000480658 OTOFQ9HC10 1997 aa14.07□□□□□ -0.16
CCM2-213ENST00000480658 NPM3O75607 178 aaKnown RBP14.07□□□□□ -0.16
CCM2-213ENST00000480658 CETPP11597 493 aa14.07□□□□□ -0.16
CCM2-213ENST00000480658 TIMM10P62072 90 aa14.07□□□□□ -0.16
CCM2-213ENST00000480658 POLA2Q14181 598 aa14.07□□□□□ -0.16
CCM2-213ENST00000480658 GRIK5Q16478 980 aa14.07□□□□□ -0.16
CCM2-213ENST00000480658 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.07□□□□□ -0.16
CCM2-213ENST00000480658 SPATA5Q8NB90 893 aa14.07□□□□□ -0.16
CCM2-213ENST00000480658 ZNF296Q8WUU4 475 aaPredicted RBP14.07□□□□□ -0.16
CCM2-213ENST00000480658 ERO1AQ96HE7 468 aa14.07□□□□□ -0.16
CCM2-213ENST00000480658 CLMNQ96JQ2 1002 aa14.07□□□□□ -0.16
CCM2-213ENST00000480658 ELP3Q9H9T3 547 aa14.07□□□□□ -0.16
CCM2-213ENST00000480658 MROH7-TTC4A0A0A0MT08 1334 aa14.07□□□□□ -0.16
CCM2-213ENST00000480658 PNMA6EA0A0J9YXQ4 647 aa14.06□□□□□ -0.16
CCM2-213ENST00000480658 HMMRO75330 724 aa14.06□□□□□ -0.16
CCM2-213ENST00000480658 TBC1D8O95759 1140 aa14.06□□□□□ -0.16
CCM2-213ENST00000480658 PLCG2P16885 1265 aa14.06□□□□□ -0.16
CCM2-213ENST00000480658 ATP8B2P98198 1209 aa14.06□□□□□ -0.16
CCM2-213ENST00000480658 PPATQ06203 517 aa14.06□□□□□ -0.16
CCM2-213ENST00000480658 PPIL2Q13356 520 aa14.06□□□□□ -0.16
CCM2-213ENST00000480658 SNAPC2Q13487 334 aa14.06□□□□□ -0.16
CCM2-213ENST00000480658 DIXDC1Q155Q3 683 aa14.06□□□□□ -0.16
CCM2-213ENST00000480658 CDC42EP5Q6NZY7 148 aa14.06□□□□□ -0.16
CCM2-213ENST00000480658 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.06□□□□□ -0.16
CCM2-213ENST00000480658 ZNF512BQ96KM6 892 aaPredicted RBP14.06□□□□□ -0.16
CCM2-213ENST00000480658 USP40Q9NVE5 1235 aa14.06□□□□□ -0.16
CCM2-213ENST00000480658 DDX19BQ9UMR2 479 aa14.06□□□□□ -0.16
CCM2-213ENST00000480658 AOX1Q06278 1338 aa14.06□□□□□ -0.16
CCM2-213ENST00000480658 COL2A1P02458 1487 aaPredicted RBP14.06□□□□□ -0.16
CCM2-213ENST00000480658 ZBTB7BO15156 539 aaPredicted RBP14.05□□□□□ -0.16
CCM2-213ENST00000480658 SURF6O75683 361 aaKnown RBP14.05□□□□□ -0.16
CCM2-213ENST00000480658 ADORA1P30542 326 aa14.05□□□□□ -0.16
CCM2-213ENST00000480658 CACNB3P54284 484 aa14.05□□□□□ -0.16
CCM2-213ENST00000480658 TTC39AQ5SRH9 613 aa14.05□□□□□ -0.16
CCM2-213ENST00000480658 ZFYVE28Q9HCC9 887 aa14.05□□□□□ -0.16
CCM2-213ENST00000480658 NOP58Q9Y2X3 529 aaKnown RBP14.05□□□□□ -0.16
CCM2-213ENST00000480658 MAST2Q6P0Q8 1798 aa14.04□□□□□ -0.16
CCM2-213ENST00000480658 CCL15-CCL14A0A0B4J2E2 113 aa14.04□□□□□ -0.16
CCM2-213ENST00000480658 BAG3O95817 575 aa14.04□□□□□ -0.16
CCM2-213ENST00000480658 CCL15Q16663 113 aa14.04□□□□□ -0.16
CCM2-213ENST00000480658 TNNI3KQ59H18 835 aa14.04□□□□□ -0.16
CCM2-213ENST00000480658 NOL9Q5SY16 702 aaKnown RBP14.04□□□□□ -0.16
CCM2-213ENST00000480658 FBXO46Q6PJ61 603 aaPredicted RBP14.04□□□□□ -0.16
CCM2-213ENST00000480658 OTUD5Q96G74 571 aa14.04□□□□□ -0.16
CCM2-213ENST00000480658 LRP2BPQ9P2M1 347 aa14.04□□□□□ -0.16
CCM2-213ENST00000480658 FZD1Q9UP38 647 aa14.04□□□□□ -0.16
CCM2-213ENST00000480658 FPGT-TNNI3KV9GXZ4 949 aa14.04□□□□□ -0.16
CCM2-213ENST00000480658 CASP8AP2Q9UKL3 1982 aa14.03□□□□□ -0.16
CCM2-213ENST00000480658 GPR75-ASB3A0A0A6YYF3 556 aa14.03□□□□□ -0.16
CCM2-213ENST00000480658 BTDP43251 543 aa14.03□□□□□ -0.16
CCM2-213ENST00000480658 RGS19P49795 217 aa14.03□□□□□ -0.16
CCM2-213ENST00000480658 ZSCAN29Q8IWY8 852 aaPredicted RBP14.03□□□□□ -0.16
CCM2-213ENST00000480658 TBC1D2Q9BYX2 928 aa14.03□□□□□ -0.16
CCM2-213ENST00000480658 HMG20BQ9P0W2 317 aa14.03□□□□□ -0.16
CCM2-213ENST00000480658 RFX7Q2KHR2 1363 aa14.03□□□□□ -0.16
CCM2-213ENST00000480658 ATRNL1Q5VV63 1379 aa14.03□□□□□ -0.16
CCM2-213ENST00000480658 DOCK2Q92608 1830 aa14.03□□□□□ -0.16
CCM2-213ENST00000480658 IGF2BP3O00425 579 aaKnown RBP eCLIP14.02□□□□□ -0.17
CCM2-213ENST00000480658 GNRH1P01148 92 aa14.02□□□□□ -0.17
CCM2-213ENST00000480658 MLLT1Q03111 559 aaPredicted RBP14.02□□□□□ -0.17
CCM2-213ENST00000480658 MECOMQ03112 1051 aa14.02□□□□□ -0.17
CCM2-213ENST00000480658 TCP10Q12799 353 aa14.02□□□□□ -0.17
CCM2-213ENST00000480658 RPAP2Q8IXW5 612 aaPredicted RBP14.02□□□□□ -0.17
CCM2-213ENST00000480658 MS4A4AQ96JQ5 239 aa14.02□□□□□ -0.17
CCM2-213ENST00000480658 PICK1Q9NRD5 415 aa14.02□□□□□ -0.17
CCM2-213ENST00000480658 RAI14Q9P0K7 980 aa14.02□□□□□ -0.17
CCM2-213ENST00000480658 ZNF112Q9UJU3 913 aa14.02□□□□□ -0.17
CCM2-213ENST00000480658 SNCAIPQ9Y6H5 919 aa14.02□□□□□ -0.17
CCM2-213ENST00000480658 RGS3P49796 1198 aa14.01□□□□□ -0.17
CCM2-213ENST00000480658 SP3Q02447 781 aa14.01□□□□□ -0.17
CCM2-213ENST00000480658 CRHR2Q13324 411 aa14.01□□□□□ -0.17
CCM2-213ENST00000480658 KIF22Q14807 665 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms