RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 EDC3Q96F86 508 aaKnown RBP13.98□□□□□ -0.17
CBWD3-206ENST00000478048 SHTN1A0MZ66 631 aa13.97□□□□□ -0.17
CBWD3-206ENST00000478048 CYP2E1P05181 493 aaPredicted RBP13.97□□□□□ -0.17
CBWD3-206ENST00000478048 NUDT7P0C024 238 aa13.97□□□□□ -0.17
CBWD3-206ENST00000478048 GMPSP49915 693 aaPredicted RBP13.97□□□□□ -0.17
CBWD3-206ENST00000478048 GPATCH3Q96I76 525 aa13.97□□□□□ -0.17
CBWD3-206ENST00000478048 GMLQ99445 158 aa13.97□□□□□ -0.17
CBWD3-206ENST00000478048 ANTXR1Q9H6X2 564 aa13.97□□□□□ -0.17
CBWD3-206ENST00000478048 STAP2Q9UGK3 403 aa13.97□□□□□ -0.17
CBWD3-206ENST00000478048 TTC41PQ6P2S7 1318 aa13.97□□□□□ -0.17
CBWD3-206ENST00000478048 WDR66Q8TBY9 1149 aa13.96□□□□□ -0.17
CBWD3-206ENST00000478048 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.96□□□□□ -0.17
CBWD3-206ENST00000478048 DNAJC2Q99543 621 aaKnown RBP13.96□□□□□ -0.17
CBWD3-206ENST00000478048 PDS5AQ29RF7 1337 aaKnown RBP13.96□□□□□ -0.17
CBWD3-206ENST00000478048 F8W031 263 aaPredicted RBP13.95□□□□□ -0.18
CBWD3-206ENST00000478048 MAP4K4O95819 1239 aaPredicted RBP13.95□□□□□ -0.18
CBWD3-206ENST00000478048 PRDX5P30044 214 aa13.95□□□□□ -0.18
CBWD3-206ENST00000478048 SCNN1DP51172 638 aa13.95□□□□□ -0.18
CBWD3-206ENST00000478048 KIAA0825Q8IV33 1275 aa13.95□□□□□ -0.18
CBWD3-206ENST00000478048 ZNF526Q8TF50 670 aaPredicted RBP13.95□□□□□ -0.18
CBWD3-206ENST00000478048 TBC1D22AQ8WUA7 517 aa13.95□□□□□ -0.18
CBWD3-206ENST00000478048 HAUS7Q99871 368 aa13.95□□□□□ -0.18
CBWD3-206ENST00000478048 ABCF2Q9UG63 623 aa13.95□□□□□ -0.18
CBWD3-206ENST00000478048 POTECB2RU33 542 aa13.95□□□□□ -0.18
CBWD3-206ENST00000478048 FKBP1AP62942 108 aaKnown RBP13.95□□□□□ -0.18
CBWD3-206ENST00000478048 AGBL3Q8NEM8 1001 aa13.95□□□□□ -0.18
CBWD3-206ENST00000478048 OSBPL3Q9H4L5 887 aa13.95□□□□□ -0.18
CBWD3-206ENST00000478048 PIH1D3Q9NQM4 214 aaKnown RBP13.95□□□□□ -0.18
CBWD3-206ENST00000478048 SALL1Q9NSC2 1324 aa13.95□□□□□ -0.18
CBWD3-206ENST00000478048 GOLIM4O00461 696 aa13.94□□□□□ -0.18
CBWD3-206ENST00000478048 ERC2O15083 957 aa13.94□□□□□ -0.18
CBWD3-206ENST00000478048 GLRX3O76003 335 aaKnown RBP13.94□□□□□ -0.18
CBWD3-206ENST00000478048 PBX2P40425 430 aa13.94□□□□□ -0.18
CBWD3-206ENST00000478048 EPS15P42566 896 aa13.94□□□□□ -0.18
CBWD3-206ENST00000478048 MYO3BQ8WXR4 1341 aa13.93□□□□□ -0.18
CBWD3-206ENST00000478048 RPS12P25398 132 aaKnown RBP13.93□□□□□ -0.18
CBWD3-206ENST00000478048 DPF2Q92785 391 aa13.93□□□□□ -0.18
CBWD3-206ENST00000478048 PAG1Q9NWQ8 432 aa13.93□□□□□ -0.18
CBWD3-206ENST00000478048 GPRC5DQ9NZD1 345 aa13.93□□□□□ -0.18
CBWD3-206ENST00000478048 CNOT7Q9UIV1 285 aaKnown RBP13.93□□□□□ -0.18
CBWD3-206ENST00000478048 TTF2Q9UNY4 1162 aaKnown RBP13.93□□□□□ -0.18
CBWD3-206ENST00000478048 AOX1Q06278 1338 aa13.93□□□□□ -0.18
CBWD3-206ENST00000478048 WDR90Q96KV7 1748 aa13.93□□□□□ -0.18
CBWD3-206ENST00000478048 EGFRP00533 1210 aa13.93□□□□□ -0.18
CBWD3-206ENST00000478048 LDHBP07195 334 aaKnown RBP13.93□□□□□ -0.18
CBWD3-206ENST00000478048 RGS3P49796 1198 aa13.93□□□□□ -0.18
CBWD3-206ENST00000478048 ZNF384Q8TF68 577 aa13.93□□□□□ -0.18
CBWD3-206ENST00000478048 DOCK2Q92608 1830 aa13.92□□□□□ -0.18
CBWD3-206ENST00000478048 ADAMTSL1Q8N6G6 1762 aa13.92□□□□□ -0.18
CBWD3-206ENST00000478048 USP17L8P0C7I0 530 aa13.92□□□□□ -0.18
CBWD3-206ENST00000478048 YY1P25490 414 aa13.92□□□□□ -0.18
CBWD3-206ENST00000478048 ERICH6Q7L0X2 663 aa13.92□□□□□ -0.18
CBWD3-206ENST00000478048 ZGPATQ8N5A5 531 aaKnown RBP13.92□□□□□ -0.18
CBWD3-206ENST00000478048 NMRK2Q9NPI5 230 aa13.92□□□□□ -0.18
CBWD3-206ENST00000478048 LRP2BPQ9P2M1 347 aa13.92□□□□□ -0.18
CBWD3-206ENST00000478048 PCDHAC2Q9Y5I4 1007 aa13.92□□□□□ -0.18
CBWD3-206ENST00000478048 IDH1O75874 414 aaKnown RBP13.91□□□□□ -0.18
CBWD3-206ENST00000478048 MECOMQ03112 1051 aa13.91□□□□□ -0.18
CBWD3-206ENST00000478048 DIXDC1Q155Q3 683 aa13.91□□□□□ -0.18
CBWD3-206ENST00000478048 SAMD7Q7Z3H4 446 aa13.91□□□□□ -0.18
CBWD3-206ENST00000478048 RRAGCQ9HB90 399 aa13.91□□□□□ -0.18
CBWD3-206ENST00000478048 RAI14Q9P0K7 980 aa13.91□□□□□ -0.18
CBWD3-206ENST00000478048 LHX6Q9UPM6 363 aa13.91□□□□□ -0.18
CBWD3-206ENST00000478048 SUGT1Q9Y2Z0 365 aa13.91□□□□□ -0.18
CBWD3-206ENST00000478048 MYH2Q9UKX2 1941 aa13.91□□□□□ -0.18
CBWD3-206ENST00000478048 CHGBP05060 677 aa13.9□□□□□ -0.18
CBWD3-206ENST00000478048 GSPT1P15170 499 aaKnown RBP13.9□□□□□ -0.18
CBWD3-206ENST00000478048 LMOD1P29536 600 aaPredicted RBP13.9□□□□□ -0.18
CBWD3-206ENST00000478048 ZNF280AP59817 542 aaPredicted RBP13.9□□□□□ -0.18
CBWD3-206ENST00000478048 LSM11P83369 360 aaKnown RBP eCLIP13.9□□□□□ -0.18
CBWD3-206ENST00000478048 SLFNL1Q499Z3 407 aa13.9□□□□□ -0.18
CBWD3-206ENST00000478048 SPTY2D1Q68D10 685 aaPredicted RBP13.9□□□□□ -0.18
CBWD3-206ENST00000478048 NSUN4Q96CB9 384 aaKnown RBP13.9□□□□□ -0.18
CBWD3-206ENST00000478048 HACL1Q9UJ83 578 aa13.9□□□□□ -0.18
CBWD3-206ENST00000478048 SCN4AP35499 1836 aa13.9□□□□□ -0.18
CBWD3-206ENST00000478048 H7C1D1 291 aa13.9□□□□□ -0.18
CBWD3-206ENST00000478048 TTF1Q15361 905 aaPredicted RBP13.9□□□□□ -0.18
CBWD3-206ENST00000478048 TBC1D10BQ4KMP7 808 aaPredicted RBP13.9□□□□□ -0.18
CBWD3-206ENST00000478048 RBM26Q5T8P6 1007 aaKnown RBP13.9□□□□□ -0.18
CBWD3-206ENST00000478048 OGFOD1Q8N543 542 aa13.9□□□□□ -0.18
CBWD3-206ENST00000478048 TRPM4Q8TD43 1214 aa13.9□□□□□ -0.18
CBWD3-206ENST00000478048 MYOZ2Q9NPC6 264 aa13.9□□□□□ -0.18
CBWD3-206ENST00000478048 EPHX2P34913 555 aa13.89□□□□□ -0.19
CBWD3-206ENST00000478048 CRKP46108 304 aa13.89□□□□□ -0.19
CBWD3-206ENST00000478048 CFAP100Q494V2 611 aa13.89□□□□□ -0.19
CBWD3-206ENST00000478048 TTC22Q5TAA0 569 aa13.89□□□□□ -0.19
CBWD3-206ENST00000478048 DZIP1Q86YF9 867 aaKnown RBP13.89□□□□□ -0.19
CBWD3-206ENST00000478048 KBTBD3Q8NAB2 608 aa13.89□□□□□ -0.19
CBWD3-206ENST00000478048 TAF1DQ9H5J8 278 aaPredicted RBP13.89□□□□□ -0.19
CBWD3-206ENST00000478048 HDAC9Q9UKV0 1011 aa13.89□□□□□ -0.19
CBWD3-206ENST00000478048 MYH7P12883 1935 aa13.88□□□□□ -0.19
CBWD3-206ENST00000478048 TRIM6-TRIM34B2RNG4 842 aa13.88□□□□□ -0.19
CBWD3-206ENST00000478048 HIRAP54198 1017 aaPredicted RBP13.88□□□□□ -0.19
CBWD3-206ENST00000478048 FOXK1P85037 733 aa13.88□□□□□ -0.19
CBWD3-206ENST00000478048 RILPL2Q969X0 211 aa13.88□□□□□ -0.19
CBWD3-206ENST00000478048 MAST3O60307 1309 aa13.88□□□□□ -0.19
CBWD3-206ENST00000478048 AK9Q5TCS8 1911 aa13.87□□□□□ -0.19
CBWD3-206ENST00000478048 IQCA1LA6NCM1 817 aa13.87□□□□□ -0.19
CBWD3-206ENST00000478048 VEGFAP15692 232 aaPredicted RBP13.87□□□□□ -0.19
CBWD3-206ENST00000478048 RBM5P52756 815 aaKnown RBP eCLIP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms