RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 RAI14Q9P0K7 980 aa27.38■■□□□ 1.97
SF1-214ENST00000477596 HSPA1AP0DMV8 641 aaKnown RBP27.37■■□□□ 1.97
SF1-214ENST00000477596 HSPA1BP0DMV9 641 aaKnown RBP27.37■■□□□ 1.97
SF1-214ENST00000477596 ZIC5Q96T25 663 aa27.37■■□□□ 1.97
SF1-214ENST00000477596 PIH1D3Q9NQM4 214 aaKnown RBP27.37■■□□□ 1.97
SF1-214ENST00000477596 MROH7-TTC4A0A0A0MT08 1334 aa27.37■■□□□ 1.97
SF1-214ENST00000477596 FAM155AB1AL88 458 aaPredicted RBP27.36■■□□□ 1.97
SF1-214ENST00000477596 ZNF157P51786 506 aaPredicted RBP27.36■■□□□ 1.97
SF1-214ENST00000477596 NFIAQ12857 509 aa27.36■■□□□ 1.97
SF1-214ENST00000477596 NSUN4Q96CB9 384 aaKnown RBP27.36■■□□□ 1.97
SF1-214ENST00000477596 ANGEL1Q9UNK9 670 aaKnown RBP27.36■■□□□ 1.97
SF1-214ENST00000477596 SUPT16HQ9Y5B9 1047 aaKnown RBP27.36■■□□□ 1.97
SF1-214ENST00000477596 IFIT2P09913 472 aaKnown RBP27.35■■□□□ 1.97
SF1-214ENST00000477596 BTDP43251 543 aa27.35■■□□□ 1.97
SF1-214ENST00000477596 TNNI2P48788 182 aa27.35■■□□□ 1.97
SF1-214ENST00000477596 DCTPP1Q9H773 170 aa27.35■■□□□ 1.97
SF1-214ENST00000477596 USP40Q9NVE5 1235 aa27.35■■□□□ 1.97
SF1-214ENST00000477596 LRP2BPQ9P2M1 347 aa27.35■■□□□ 1.97
SF1-214ENST00000477596 RASAL3Q86YV0 1011 aa27.34■■□□□ 1.97
SF1-214ENST00000477596 LRRCC1Q9C099 1032 aa27.34■■□□□ 1.97
SF1-214ENST00000477596 OTOFQ9HC10 1997 aa27.34■■□□□ 1.97
SF1-214ENST00000477596 RFX7Q2KHR2 1363 aa27.34■■□□□ 1.97
SF1-214ENST00000477596 SLC10A3P09131 477 aa27.33■■□□□ 1.97
SF1-214ENST00000477596 SUPT20HL1Q3ZLR7 823 aa27.33■■□□□ 1.97
SF1-214ENST00000477596 ARMC9Q7Z3E5 817 aa27.33■■□□□ 1.97
SF1-214ENST00000477596 FAM163AQ96GL9 167 aaPredicted RBP27.33■■□□□ 1.97
SF1-214ENST00000477596 ANTXR1Q9H6X2 564 aa27.33■■□□□ 1.97
SF1-214ENST00000477596 TCP10Q12799 353 aa27.32■■□□□ 1.96
SF1-214ENST00000477596 FKBP1CQ5VVH2 108 aa27.32■■□□□ 1.96
SF1-214ENST00000477596 FAM83AQ86UY5 434 aa27.32■■□□□ 1.96
SF1-214ENST00000477596 FAM198AQ9UFP1 575 aa27.32■■□□□ 1.96
SF1-214ENST00000477596 DOCK2Q92608 1830 aa27.32■■□□□ 1.96
SF1-214ENST00000477596 SLF2Q8IX21 1173 aa27.31■■□□□ 1.96
SF1-214ENST00000477596 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.31■■□□□ 1.96
SF1-214ENST00000477596 GPR75-ASB3A0A0A6YYF3 556 aa27.3■■□□□ 1.96
SF1-214ENST00000477596 LDLRAD1Q5T700 205 aa27.3■■□□□ 1.96
SF1-214ENST00000477596 ZFPM1Q8IX07 1006 aa27.3■■□□□ 1.96
SF1-214ENST00000477596 EXOC6Q8TAG9 804 aa27.3■■□□□ 1.96
SF1-214ENST00000477596 RPAP1Q9BWH6 1393 aaPredicted RBP27.3■■□□□ 1.96
SF1-214ENST00000477596 USP2O75604 605 aaPredicted RBP27.29■■□□□ 1.96
SF1-214ENST00000477596 RHBDL3P58872 404 aa27.29■■□□□ 1.96
SF1-214ENST00000477596 GSTO1P78417 241 aa27.29■■□□□ 1.96
SF1-214ENST00000477596 NOGQ13253 232 aa27.29■■□□□ 1.96
SF1-214ENST00000477596 MAP3K11Q16584 847 aa27.29■■□□□ 1.96
SF1-214ENST00000477596 ADGRA1Q86SQ6 560 aa27.29■■□□□ 1.96
SF1-214ENST00000477596 CCDC102AQ96A19 550 aa27.29■■□□□ 1.96
SF1-214ENST00000477596 CLMNQ96JQ2 1002 aa27.29■■□□□ 1.96
SF1-214ENST00000477596 WBP1LQ9NX94 342 aa27.29■■□□□ 1.96
SF1-214ENST00000477596 PPP1R12BO60237 982 aaPredicted RBP27.28■■□□□ 1.96
SF1-214ENST00000477596 WDHD1O75717 1129 aaPredicted RBP27.28■■□□□ 1.96
SF1-214ENST00000477596 MAP2K2P36507 400 aa27.28■■□□□ 1.96
SF1-214ENST00000477596 RGS3P49796 1198 aa27.28■■□□□ 1.96
SF1-214ENST00000477596 NAA16Q6N069 864 aaPredicted RBP27.28■■□□□ 1.96
SF1-214ENST00000477596 FAM151AQ8WW52 585 aa27.28■■□□□ 1.96
SF1-214ENST00000477596 DDX4Q9NQI0 724 aaKnown RBP27.28■■□□□ 1.96
SF1-214ENST00000477596 FOXN1O15353 648 aa27.27■■□□□ 1.96
SF1-214ENST00000477596 IDH1O75874 414 aaKnown RBP27.27■■□□□ 1.96
SF1-214ENST00000477596 MKRN3Q13064 507 aaKnown RBP27.27■■□□□ 1.96
SF1-214ENST00000477596 EDC3Q96F86 508 aaKnown RBP27.27■■□□□ 1.96
SF1-214ENST00000477596 DNAJC2Q99543 621 aaKnown RBP27.27■■□□□ 1.96
SF1-214ENST00000477596 LDHCP07864 332 aa27.26■■□□□ 1.95
SF1-214ENST00000477596 KIF23Q02241 960 aaPredicted RBP27.26■■□□□ 1.95
SF1-214ENST00000477596 PICALMQ13492 652 aa27.26■■□□□ 1.95
SF1-214ENST00000477596 IDI2Q9BXS1 227 aa27.26■■□□□ 1.95
SF1-214ENST00000477596 AK9Q5TCS8 1911 aa27.26■■□□□ 1.95
SF1-214ENST00000477596 IREB2P48200 963 aaKnown RBP27.25■■□□□ 1.95
SF1-214ENST00000477596 IRX6P78412 446 aaPredicted RBP27.25■■□□□ 1.95
SF1-214ENST00000477596 MAP2K1Q02750 393 aaPredicted RBP27.25■■□□□ 1.95
SF1-214ENST00000477596 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.25■■□□□ 1.95
SF1-214ENST00000477596 BOLA2Q9H3K6 86 aa27.25■■□□□ 1.95
SF1-214ENST00000477596 GOLIM4O00461 696 aa27.24■■□□□ 1.95
SF1-214ENST00000477596 SH3RF3Q8TEJ3 882 aaPredicted RBP27.24■■□□□ 1.95
SF1-214ENST00000477596 AATFQ9NY61 560 aaKnown RBP eCLIP27.24■■□□□ 1.954e-7■■■□□ 15.2
SF1-214ENST00000477596 TSHZ3Q63HK5 1081 aa27.23■■□□□ 1.95
SF1-214ENST00000477596 SH3BP5LQ7L8J4 393 aa27.23■■□□□ 1.95
SF1-214ENST00000477596 MAGEB6Q8N7X4 407 aa27.23■■□□□ 1.95
SF1-214ENST00000477596 CDK5RAP2Q96SN8 1893 aa27.22■■□□□ 1.95
SF1-214ENST00000477596 ATP5JP18859 108 aa27.22■■□□□ 1.95
SF1-214ENST00000477596 CYP7A1P22680 504 aa27.22■■□□□ 1.95
SF1-214ENST00000477596 MIGA2Q7L4E1 593 aa27.22■■□□□ 1.95
SF1-214ENST00000477596 AIDAQ96BJ3 306 aa27.22■■□□□ 1.95
SF1-214ENST00000477596 ENTPD3O75355 529 aa27.21■■□□□ 1.95
SF1-214ENST00000477596 HDAC1Q13547 482 aaPredicted RBP27.21■■□□□ 1.95
SF1-214ENST00000477596 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.21■■□□□ 1.95
SF1-214ENST00000477596 TEX11Q8IYF3 940 aa27.21■■□□□ 1.95
SF1-214ENST00000477596 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.21■■□□□ 1.951e-14■■□□□ 12.5
SF1-214ENST00000477596 OTUD7AQ8TE49 926 aaPredicted RBP27.21■■□□□ 1.95
SF1-214ENST00000477596 TSKSQ9UJT2 592 aa27.21■■□□□ 1.95
SF1-214ENST00000477596 ATRNL1Q5VV63 1379 aa27.21■■□□□ 1.95
SF1-214ENST00000477596 DDTLA6NHG4 134 aaPredicted RBP27.2■■□□□ 1.94
SF1-214ENST00000477596 SLURP2P0DP57 97 aa27.2■■□□□ 1.94
SF1-214ENST00000477596 DYNLL1P63167 89 aaKnown RBP27.2■■□□□ 1.94
SF1-214ENST00000477596 ANKRD13AQ8IZ07 590 aa27.2■■□□□ 1.94
SF1-214ENST00000477596 MIGA1Q8NAN2 632 aa27.2■■□□□ 1.94
SF1-214ENST00000477596 SLC10A4Q96EP9 437 aa27.2■■□□□ 1.94
SF1-214ENST00000477596 NOL10Q9BSC4 688 aaKnown RBP27.2■■□□□ 1.94
SF1-214ENST00000477596 ELP3Q9H9T3 547 aa27.2■■□□□ 1.94
SF1-214ENST00000477596 GJA5P36382 358 aa27.19■■□□□ 1.94
SF1-214ENST00000477596 MAP3K12Q12852 859 aa27.19■■□□□ 1.94
SF1-214ENST00000477596 VGLL4Q14135 290 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms