RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ZNHIT6Q9NWK9 470 aaKnown RBP12.64□□□□□ -0.39
COL27A1-204ENST00000477421 CLIC4Q9Y696 253 aa12.64□□□□□ -0.39
COL27A1-204ENST00000477421 VWA3AA6NCI4 1184 aa12.64□□□□□ -0.39
COL27A1-204ENST00000477421 H7C1W4 665 aa12.64□□□□□ -0.39
COL27A1-204ENST00000477421 POLR2DO15514 142 aaKnown RBP12.64□□□□□ -0.39
COL27A1-204ENST00000477421 CYP2E1P05181 493 aaPredicted RBP12.64□□□□□ -0.39
COL27A1-204ENST00000477421 TSPY3P0CV98 308 aa12.64□□□□□ -0.39
COL27A1-204ENST00000477421 TSPY8P0CW00 308 aa12.64□□□□□ -0.39
COL27A1-204ENST00000477421 CLIC6Q96NY7 704 aa12.64□□□□□ -0.39
COL27A1-204ENST00000477421 NUP88Q99567 741 aaPredicted RBP12.64□□□□□ -0.39
COL27A1-204ENST00000477421 PCDHA7Q9UN72 937 aa12.64□□□□□ -0.39
COL27A1-204ENST00000477421 MAP3K15Q6ZN16 1313 aa12.64□□□□□ -0.39
COL27A1-204ENST00000477421 N4BP3O15049 544 aa12.63□□□□□ -0.39
COL27A1-204ENST00000477421 PRKAB2O43741 272 aa12.63□□□□□ -0.39
COL27A1-204ENST00000477421 GPS2Q13227 327 aa12.63□□□□□ -0.39
COL27A1-204ENST00000477421 DNA2P51530 1060 aa12.63□□□□□ -0.39
COL27A1-204ENST00000477421 KIF4BQ2VIQ3 1234 aa12.63□□□□□ -0.39
COL27A1-204ENST00000477421 CRACR2BQ8N4Y2 399 aaPredicted RBP12.63□□□□□ -0.39
COL27A1-204ENST00000477421 KCNH3Q9ULD8 1083 aa12.63□□□□□ -0.39
COL27A1-204ENST00000477421 TMEM131LA2VDJ0 1609 aa12.63□□□□□ -0.39
COL27A1-204ENST00000477421 PREX1Q8TCU6 1659 aa12.63□□□□□ -0.39
COL27A1-204ENST00000477421 BTBD18B2RXH4 712 aa12.63□□□□□ -0.39
COL27A1-204ENST00000477421 KIF5BP33176 963 aa12.63□□□□□ -0.39
COL27A1-204ENST00000477421 FAM47AQ5JRC9 791 aa12.63□□□□□ -0.39
COL27A1-204ENST00000477421 KRI1Q8N9T8 703 aaKnown RBP12.63□□□□□ -0.39
COL27A1-204ENST00000477421 VPS54Q9P1Q0 977 aa12.63□□□□□ -0.39
COL27A1-204ENST00000477421 SAP30BPQ9UHR5 308 aaKnown RBP12.63□□□□□ -0.39
COL27A1-204ENST00000477421 CTDP1Q9Y5B0 961 aaPredicted RBP12.63□□□□□ -0.39
COL27A1-204ENST00000477421 NRKQ7Z2Y5 1582 aa12.63□□□□□ -0.39
COL27A1-204ENST00000477421 NEMFO60524 1076 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 BAG3O95817 575 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 NDUFA8P51970 172 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 SCARF1Q14162 830 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 NOM1Q5C9Z4 860 aaKnown RBP12.62□□□□□ -0.39
COL27A1-204ENST00000477421 NLRP10Q86W26 655 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 ZNF274Q96GC6 653 aaPredicted RBP12.62□□□□□ -0.39
COL27A1-204ENST00000477421 CCDC43Q96MW1 224 aaKnown RBP12.62□□□□□ -0.39
COL27A1-204ENST00000477421 RNF216Q9NWF9 866 aaPredicted RBP12.62□□□□□ -0.39
COL27A1-204ENST00000477421 PYCARDQ9ULZ3 195 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 SPATA31A3Q5VYP0 1347 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 DLC1Q96QB1 1528 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 ZNF827Q17R98 1081 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 RRAGBQ5VZM2 374 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 CCDC70Q6NSX1 233 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 TRMT44Q8IYL2 757 aaKnown RBP12.62□□□□□ -0.39
COL27A1-204ENST00000477421 IFNL3Q8IZI9 196 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 TMEM87BQ96K49 555 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 RTCBQ9Y3I0 505 aaKnown RBP12.62□□□□□ -0.39
COL27A1-204ENST00000477421 ERICH4A6NGS2 130 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 RIOK3O14730 519 aaKnown RBP12.62□□□□□ -0.39
COL27A1-204ENST00000477421 FBXO18Q8NFZ0 1043 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 SMARCC1Q92922 1105 aaPredicted RBP12.62□□□□□ -0.39
COL27A1-204ENST00000477421 KAZALD1Q96I82 304 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 MRVI1Q9Y6F6 885 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.62□□□□□ -0.39
COL27A1-204ENST00000477421 ADGRL3Q9HAR2 1447 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 USP17L12C9JPN9 530 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 USP17L21D6R901 530 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 RIMBP2O15034 1052 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 HSP90B2PQ58FF3 399 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 AKNAD1Q5T1N1 836 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 SYT10Q6XYQ8 523 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 UIMC1Q96RL1 719 aa12.62□□□□□ -0.39
COL27A1-204ENST00000477421 ARHGEF28Q8N1W1 1705 aaKnown RBP12.62□□□□□ -0.39
COL27A1-204ENST00000477421 ZSCAN12O43309 604 aa12.61□□□□□ -0.39
COL27A1-204ENST00000477421 PNOCQ13519 176 aa12.61□□□□□ -0.39
COL27A1-204ENST00000477421 LOC102724428A0A0B4J2F2 783 aa12.61□□□□□ -0.39
COL27A1-204ENST00000477421 A0A0G2JLW4 131 aa12.61□□□□□ -0.39
COL27A1-204ENST00000477421 GNAT2P19087 354 aa12.61□□□□□ -0.39
COL27A1-204ENST00000477421 SIK1P57059 783 aa12.61□□□□□ -0.39
COL27A1-204ENST00000477421 SMIM5Q71RC9 77 aa12.61□□□□□ -0.39
COL27A1-204ENST00000477421 TTLL11Q8NHH1 800 aa12.61□□□□□ -0.39
COL27A1-204ENST00000477421 KARSQ15046 597 aaKnown RBP12.61□□□□□ -0.39
COL27A1-204ENST00000477421 PDIA6Q15084 440 aa12.61□□□□□ -0.39
COL27A1-204ENST00000477421 ZNF287Q9HBT7 754 aa12.61□□□□□ -0.39
COL27A1-204ENST00000477421 PFKFB1P16118 471 aa12.6□□□□□ -0.39
COL27A1-204ENST00000477421 DDIT3P35638 169 aa12.6□□□□□ -0.39
COL27A1-204ENST00000477421 EIF6P56537 245 aaKnown RBP12.6□□□□□ -0.39
COL27A1-204ENST00000477421 KIAA1328Q86T90 577 aa12.6□□□□□ -0.39
COL27A1-204ENST00000477421 HIBADHP31937 336 aaKnown RBP12.6□□□□□ -0.39
COL27A1-204ENST00000477421 MCAMP43121 646 aa12.6□□□□□ -0.39
COL27A1-204ENST00000477421 CRKLP46109 303 aaKnown RBP12.6□□□□□ -0.39
COL27A1-204ENST00000477421 LMTK3Q96Q04 1460 aa12.6□□□□□ -0.39
COL27A1-204ENST00000477421 PATL2C9JE40 543 aaKnown RBP12.6□□□□□ -0.39
COL27A1-204ENST00000477421 POLR3GO15318 223 aaPredicted RBP12.6□□□□□ -0.39
COL27A1-204ENST00000477421 TNNT3P45378 269 aaPredicted RBP12.6□□□□□ -0.39
COL27A1-204ENST00000477421 MYL5Q02045 173 aa12.6□□□□□ -0.39
COL27A1-204ENST00000477421 PARP10Q53GL7 1025 aa12.6□□□□□ -0.39
COL27A1-204ENST00000477421 PIK3AP1Q6ZUJ8 805 aa12.6□□□□□ -0.39
COL27A1-204ENST00000477421 TCP11L1Q9NUJ3 509 aa12.6□□□□□ -0.39
COL27A1-204ENST00000477421 LDHCP07864 332 aa12.59□□□□□ -0.39
COL27A1-204ENST00000477421 ERCC3P19447 782 aa12.59□□□□□ -0.39
COL27A1-204ENST00000477421 CHRNDQ07001 517 aa12.59□□□□□ -0.39
COL27A1-204ENST00000477421 ADALQ6DHV7 355 aa12.59□□□□□ -0.39
COL27A1-204ENST00000477421 C11orf57Q6ZUT1 292 aaPredicted RBP12.59□□□□□ -0.39
COL27A1-204ENST00000477421 STOX1Q6ZVD7 989 aa12.59□□□□□ -0.39
COL27A1-204ENST00000477421 CCDC12Q8WUD4 166 aaPredicted RBP12.59□□□□□ -0.39
COL27A1-204ENST00000477421 XPO4Q9C0E2 1151 aaKnown RBP12.59□□□□□ -0.39
COL27A1-204ENST00000477421 PIH1D3Q9NQM4 214 aaKnown RBP12.59□□□□□ -0.39
COL27A1-204ENST00000477421 ELP1O95163 1332 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms