RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 CDC42EP5Q6NZY7 148 aa15.26■□□□□ 0.03
APTX-220ENST00000476858 HHIPL2Q6UWX4 724 aa15.26■□□□□ 0.03
APTX-220ENST00000476858 ADGRA1Q86SQ6 560 aa15.26■□□□□ 0.03
APTX-220ENST00000476858 ZFPM1Q8IX07 1006 aa15.26■□□□□ 0.03
APTX-220ENST00000476858 TEPSINQ96N21 525 aa15.26■□□□□ 0.03
APTX-220ENST00000476858 TMEM39BQ9GZU3 492 aa15.26■□□□□ 0.03
APTX-220ENST00000476858 SUGT1Q9Y2Z0 365 aa15.26■□□□□ 0.03
APTX-220ENST00000476858 IGHDP01880 384 aa15.25■□□□□ 0.03
APTX-220ENST00000476858 GRM1Q13255 1194 aa15.25■□□□□ 0.03
APTX-220ENST00000476858 SLFNL1Q499Z3 407 aa15.25■□□□□ 0.03
APTX-220ENST00000476858 CCDC158Q5M9N0 1113 aa15.25■□□□□ 0.03
APTX-220ENST00000476858 APOBEC3FQ8IUX4 373 aaKnown RBP15.25■□□□□ 0.03
APTX-220ENST00000476858 NSUN4Q96CB9 384 aaKnown RBP15.25■□□□□ 0.03
APTX-220ENST00000476858 ZNF512BQ96KM6 892 aaPredicted RBP15.25■□□□□ 0.03
APTX-220ENST00000476858 GBA2Q9HCG7 927 aaPredicted RBP15.25■□□□□ 0.03
APTX-220ENST00000476858 MYH2Q9UKX2 1941 aa15.25■□□□□ 0.03
APTX-220ENST00000476858 PCNTO95613 3336 aa15.25■□□□□ 0.03
APTX-220ENST00000476858 GAKO14976 1311 aa15.24■□□□□ 0.03
APTX-220ENST00000476858 UBE2Q2LH0YL09 131 aa15.24■□□□□ 0.03
APTX-220ENST00000476858 AOC2O75106 756 aa15.24■□□□□ 0.03
APTX-220ENST00000476858 PRKAR2AP13861 404 aaKnown RBP15.24■□□□□ 0.03
APTX-220ENST00000476858 MMP14P50281 582 aa15.24■□□□□ 0.03
APTX-220ENST00000476858 CLASRPQ8N2M8 674 aaKnown RBP15.24■□□□□ 0.03
APTX-220ENST00000476858 MRIQ9BWK5 157 aa15.24■□□□□ 0.03
APTX-220ENST00000476858 LRRCC1Q9C099 1032 aa15.24■□□□□ 0.03
APTX-220ENST00000476858 RAI14Q9P0K7 980 aa15.24■□□□□ 0.03
APTX-220ENST00000476858 HUNKP57058 714 aa15.23■□□□□ 0.03
APTX-220ENST00000476858 DEFB115Q30KQ5 88 aa15.23■□□□□ 0.03
APTX-220ENST00000476858 ERICH6Q7L0X2 663 aa15.23■□□□□ 0.03
APTX-220ENST00000476858 DZIP1Q86YF9 867 aaKnown RBP15.23■□□□□ 0.03
APTX-220ENST00000476858 DDX4Q9NQI0 724 aaKnown RBP15.23■□□□□ 0.03
APTX-220ENST00000476858 FAM198AQ9UFP1 575 aa15.23■□□□□ 0.03
APTX-220ENST00000476858 MROH7-TTC4A0A0A0MT08 1334 aa15.22■□□□□ 0.03
APTX-220ENST00000476858 MAST3O60307 1309 aa15.22■□□□□ 0.03
APTX-220ENST00000476858 MAST2Q6P0Q8 1798 aa15.22■□□□□ 0.03
APTX-220ENST00000476858 IFIT2P09913 472 aaKnown RBP15.22■□□□□ 0.03
APTX-220ENST00000476858 BTDP43251 543 aa15.22■□□□□ 0.03
APTX-220ENST00000476858 RHBDL3P58872 404 aa15.22■□□□□ 0.03
APTX-220ENST00000476858 TCP10Q12799 353 aa15.22■□□□□ 0.03
APTX-220ENST00000476858 PAXIP1Q6ZW49 1069 aaPredicted RBP15.22■□□□□ 0.03
APTX-220ENST00000476858 SPDYE1Q8NFV5 336 aaPredicted RBP15.22■□□□□ 0.03
APTX-220ENST00000476858 BOLA2Q9H3K6 86 aa15.22■□□□□ 0.03
APTX-220ENST00000476858 USP40Q9NVE5 1235 aa15.22■□□□□ 0.03
APTX-220ENST00000476858 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.22■□□□□ 0.03
APTX-220ENST00000476858 RFX7Q2KHR2 1363 aa15.22■□□□□ 0.03
APTX-220ENST00000476858 PAPPA2Q9BXP8 1791 aa15.21■□□□□ 0.03
APTX-220ENST00000476858 MYO1BO43795 1136 aa15.21■□□□□ 0.03
APTX-220ENST00000476858 DYNLL1P63167 89 aaKnown RBP15.21■□□□□ 0.03
APTX-220ENST00000476858 SH3BP5LQ7L8J4 393 aa15.21■□□□□ 0.03
APTX-220ENST00000476858 JMYQ8N9B5 988 aa15.21■□□□□ 0.03
APTX-220ENST00000476858 CLMNQ96JQ2 1002 aa15.21■□□□□ 0.03
APTX-220ENST00000476858 CAPNS2Q96L46 248 aa15.21■□□□□ 0.03
APTX-220ENST00000476858 DNAJC2Q99543 621 aaKnown RBP15.21■□□□□ 0.03
APTX-220ENST00000476858 LRP2BPQ9P2M1 347 aa15.21■□□□□ 0.03
APTX-220ENST00000476858 DOCK2Q92608 1830 aa15.21■□□□□ 0.03
APTX-220ENST00000476858 WDR33Q9C0J8 1336 aaKnown RBP15.2■□□□□ 0.02
APTX-220ENST00000476858 GPR75-ASB3A0A0A6YYF3 556 aa15.2■□□□□ 0.02
APTX-220ENST00000476858 FAM155AB1AL88 458 aaPredicted RBP15.2■□□□□ 0.02
APTX-220ENST00000476858 GOLIM4O00461 696 aa15.2■□□□□ 0.02
APTX-220ENST00000476858 WDHD1O75717 1129 aaPredicted RBP15.2■□□□□ 0.02
APTX-220ENST00000476858 HDAC1Q13547 482 aaPredicted RBP15.2■□□□□ 0.02
APTX-220ENST00000476858 SPTY2D1Q68D10 685 aaPredicted RBP15.2■□□□□ 0.02
APTX-220ENST00000476858 ZGPATQ8N5A5 531 aaKnown RBP15.2■□□□□ 0.02
APTX-220ENST00000476858 C2orf69Q8N8R5 385 aa15.2■□□□□ 0.02
APTX-220ENST00000476858 FAM163AQ96GL9 167 aaPredicted RBP15.2■□□□□ 0.02
APTX-220ENST00000476858 OTOFQ9HC10 1997 aa15.19■□□□□ 0.02
APTX-220ENST00000476858 THSD7BQ9C0I4 1608 aa15.19■□□□□ 0.02
APTX-220ENST00000476858 USP2O75604 605 aaPredicted RBP15.19■□□□□ 0.02
APTX-220ENST00000476858 IDH1O75874 414 aaKnown RBP15.19■□□□□ 0.02
APTX-220ENST00000476858 RGS3P49796 1198 aa15.19■□□□□ 0.02
APTX-220ENST00000476858 SH3RF3Q8TEJ3 882 aaPredicted RBP15.19■□□□□ 0.02
APTX-220ENST00000476858 SSUH2Q9Y2M2 353 aa15.19■□□□□ 0.02
APTX-220ENST00000476858 SALL3Q9BXA9 1300 aa15.18■□□□□ 0.02
APTX-220ENST00000476858 MAP4K4O95819 1239 aaPredicted RBP15.18■□□□□ 0.02
APTX-220ENST00000476858 ATP5JP18859 108 aa15.18■□□□□ 0.02
APTX-220ENST00000476858 TTLL12Q14166 644 aaPredicted RBP15.18■□□□□ 0.02
APTX-220ENST00000476858 B4GALNT3Q6L9W6 998 aa15.18■□□□□ 0.02
APTX-220ENST00000476858 NAA16Q6N069 864 aaPredicted RBP15.18■□□□□ 0.02
APTX-220ENST00000476858 MAGEB6Q8N7X4 407 aa15.18■□□□□ 0.02
APTX-220ENST00000476858 MIGA1Q8NAN2 632 aa15.18■□□□□ 0.02
APTX-220ENST00000476858 AATFQ9NY61 560 aaKnown RBP eCLIP15.18■□□□□ 0.02
APTX-220ENST00000476858 ANGEL1Q9UNK9 670 aaKnown RBP15.18■□□□□ 0.02
APTX-220ENST00000476858 DDTLA6NHG4 134 aaPredicted RBP15.17■□□□□ 0.02
APTX-220ENST00000476858 CYP7A1P22680 504 aa15.17■□□□□ 0.02
APTX-220ENST00000476858 MKRN3Q13064 507 aaKnown RBP15.17■□□□□ 0.02
APTX-220ENST00000476858 PICALMQ13492 652 aa15.17■□□□□ 0.02
APTX-220ENST00000476858 LDLRAD1Q5T700 205 aa15.17■□□□□ 0.02
APTX-220ENST00000476858 ANKRD45Q5TZF3 282 aa15.17■□□□□ 0.02
APTX-220ENST00000476858 RGMBQ6NW40 437 aa15.17■□□□□ 0.02
APTX-220ENST00000476858 MIGA2Q7L4E1 593 aa15.17■□□□□ 0.02
APTX-220ENST00000476858 RASAL3Q86YV0 1011 aa15.17■□□□□ 0.02
APTX-220ENST00000476858 HAUS7Q99871 368 aa15.17■□□□□ 0.02
APTX-220ENST00000476858 PPP2R3BQ9Y5P8 575 aa15.17■□□□□ 0.02
APTX-220ENST00000476858 ATRNL1Q5VV63 1379 aa15.16■□□□□ 0.02
APTX-220ENST00000476858 GJA5P36382 358 aa15.16■□□□□ 0.02
APTX-220ENST00000476858 ZNF157P51786 506 aaPredicted RBP15.16■□□□□ 0.02
APTX-220ENST00000476858 FAM83AQ86UY5 434 aa15.16■□□□□ 0.02
APTX-220ENST00000476858 SMC5Q8IY18 1101 aa15.16■□□□□ 0.02
APTX-220ENST00000476858 PI4K2BQ8TCG2 481 aa15.16■□□□□ 0.02
APTX-220ENST00000476858 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms