RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 INHBEP58166 350 aa12.54□□□□□ -0.4
CCM2-208ENST00000476594 TNNI3KQ59H18 835 aa12.54□□□□□ -0.4
CCM2-208ENST00000476594 LDLRAD1Q5T700 205 aa12.54□□□□□ -0.4
CCM2-208ENST00000476594 NBPF12Q5TAG4 269 aaPredicted RBP12.54□□□□□ -0.4
CCM2-208ENST00000476594 CEP85Q6P2H3 762 aa12.54□□□□□ -0.4
CCM2-208ENST00000476594 MOB2Q70IA6 237 aa12.54□□□□□ -0.4
CCM2-208ENST00000476594 SPATA5Q8NB90 893 aa12.54□□□□□ -0.4
CCM2-208ENST00000476594 NOL10Q9BSC4 688 aaKnown RBP12.54□□□□□ -0.4
CCM2-208ENST00000476594 CSADQ9Y600 493 aa12.54□□□□□ -0.4
CCM2-208ENST00000476594 FPGT-TNNI3KV9GXZ4 949 aa12.54□□□□□ -0.4
CCM2-208ENST00000476594 MANSC4A6NHS7 340 aaPredicted RBP12.53□□□□□ -0.4
CCM2-208ENST00000476594 ALDH1A1P00352 501 aa12.53□□□□□ -0.4
CCM2-208ENST00000476594 GRIK5Q16478 980 aa12.53□□□□□ -0.4
CCM2-208ENST00000476594 APOBEC3HQ6NTF7 200 aaKnown RBP12.53□□□□□ -0.4
CCM2-208ENST00000476594 COG6Q9Y2V7 657 aa12.53□□□□□ -0.4
CCM2-208ENST00000476594 DAGLAQ9Y4D2 1042 aa12.53□□□□□ -0.4
CCM2-208ENST00000476594 MAP4K4O95819 1239 aaPredicted RBP12.52□□□□□ -0.41
CCM2-208ENST00000476594 DIXDC1Q155Q3 683 aa12.52□□□□□ -0.41
CCM2-208ENST00000476594 OTUD7BQ6GQQ9 843 aa12.52□□□□□ -0.41
CCM2-208ENST00000476594 FAM151AQ8WW52 585 aa12.52□□□□□ -0.41
CCM2-208ENST00000476594 CSRNP1Q96S65 589 aa12.52□□□□□ -0.41
CCM2-208ENST00000476594 TMEM39BQ9GZU3 492 aa12.52□□□□□ -0.41
CCM2-208ENST00000476594 USP40Q9NVE5 1235 aa12.52□□□□□ -0.41
CCM2-208ENST00000476594 LRP2BPQ9P2M1 347 aa12.52□□□□□ -0.41
CCM2-208ENST00000476594 AKAP11Q9UKA4 1901 aa12.51□□□□□ -0.41
CCM2-208ENST00000476594 USP2O75604 605 aaPredicted RBP12.51□□□□□ -0.41
CCM2-208ENST00000476594 SPRYD7Q5W111 196 aa12.51□□□□□ -0.41
CCM2-208ENST00000476594 ZNF512BQ96KM6 892 aaPredicted RBP12.51□□□□□ -0.41
CCM2-208ENST00000476594 RNF186Q9NXI6 227 aa12.51□□□□□ -0.41
CCM2-208ENST00000476594 RAI14Q9P0K7 980 aa12.51□□□□□ -0.41
CCM2-208ENST00000476594 HMG20BQ9P0W2 317 aa12.51□□□□□ -0.41
CCM2-208ENST00000476594 GAKO14976 1311 aa12.51□□□□□ -0.41
CCM2-208ENST00000476594 SSC5DA1L4H1 1573 aa12.51□□□□□ -0.41
CCM2-208ENST00000476594 ENTPD3O75355 529 aa12.5□□□□□ -0.41
CCM2-208ENST00000476594 WDHD1O75717 1129 aaPredicted RBP12.5□□□□□ -0.41
CCM2-208ENST00000476594 TRPA1O75762 1119 aa12.5□□□□□ -0.41
CCM2-208ENST00000476594 TM4SF4P48230 202 aa12.5□□□□□ -0.41
CCM2-208ENST00000476594 CACNB3P54284 484 aa12.5□□□□□ -0.41
CCM2-208ENST00000476594 MAP3K9P80192 1104 aa12.5□□□□□ -0.41
CCM2-208ENST00000476594 CDC42EP5Q6NZY7 148 aa12.5□□□□□ -0.41
CCM2-208ENST00000476594 TMED8Q6PL24 325 aaPredicted RBP12.5□□□□□ -0.41
CCM2-208ENST00000476594 CLASRPQ8N2M8 674 aaKnown RBP12.5□□□□□ -0.41
CCM2-208ENST00000476594 KIF1BPQ96EK5 621 aa12.5□□□□□ -0.41
CCM2-208ENST00000476594 FAM163AQ96GL9 167 aaPredicted RBP12.5□□□□□ -0.41
CCM2-208ENST00000476594 WNK4Q96J92 1243 aa12.5□□□□□ -0.41
CCM2-208ENST00000476594 TEPSINQ96N21 525 aa12.5□□□□□ -0.41
CCM2-208ENST00000476594 ZIC5Q96T25 663 aa12.5□□□□□ -0.41
CCM2-208ENST00000476594 ZNF341Q9BYN7 854 aa12.5□□□□□ -0.41
CCM2-208ENST00000476594 ZBTB40Q9NUA8 1239 aa12.5□□□□□ -0.41
CCM2-208ENST00000476594 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.5□□□□□ -0.41
CCM2-208ENST00000476594 TSKSQ9UJT2 592 aa12.5□□□□□ -0.41
CCM2-208ENST00000476594 MROH7-TTC4A0A0A0MT08 1334 aa12.5□□□□□ -0.41
CCM2-208ENST00000476594 AOX1Q06278 1338 aa12.5□□□□□ -0.41
CCM2-208ENST00000476594 RAB11FIP3O75154 756 aa12.49□□□□□ -0.41
CCM2-208ENST00000476594 BAG3O95817 575 aa12.49□□□□□ -0.41
CCM2-208ENST00000476594 PLCG2P16885 1265 aa12.49□□□□□ -0.41
CCM2-208ENST00000476594 MCAMP43121 646 aa12.49□□□□□ -0.41
CCM2-208ENST00000476594 BTDP43251 543 aa12.49□□□□□ -0.41
CCM2-208ENST00000476594 MECOMQ03112 1051 aa12.49□□□□□ -0.41
CCM2-208ENST00000476594 MKRN3Q13064 507 aaKnown RBP12.49□□□□□ -0.41
CCM2-208ENST00000476594 CERS3Q8IU89 383 aa12.49□□□□□ -0.41
CCM2-208ENST00000476594 DBNDD2Q9BQY9 259 aa12.49□□□□□ -0.41
CCM2-208ENST00000476594 IDI2Q9BXS1 227 aa12.49□□□□□ -0.41
CCM2-208ENST00000476594 EXOC6BQ9Y2D4 811 aa12.49□□□□□ -0.41
CCM2-208ENST00000476594 TCP10Q12799 353 aa12.48□□□□□ -0.41
CCM2-208ENST00000476594 AACSQ86V21 672 aa12.48□□□□□ -0.41
CCM2-208ENST00000476594 ZSCAN29Q8IWY8 852 aaPredicted RBP12.48□□□□□ -0.41
CCM2-208ENST00000476594 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.48□□□□□ -0.41
CCM2-208ENST00000476594 WRNIP1Q96S55 665 aa12.48□□□□□ -0.41
CCM2-208ENST00000476594 ELP3Q9H9T3 547 aa12.48□□□□□ -0.41
CCM2-208ENST00000476594 MYH2Q9UKX2 1941 aa12.48□□□□□ -0.41
CCM2-208ENST00000476594 GPR75-ASB3A0A0A6YYF3 556 aa12.47□□□□□ -0.41
CCM2-208ENST00000476594 IFIT2P09913 472 aaKnown RBP12.47□□□□□ -0.41
CCM2-208ENST00000476594 GTF2A2P52657 109 aa12.47□□□□□ -0.41
CCM2-208ENST00000476594 VGLL4Q14135 290 aa12.47□□□□□ -0.41
CCM2-208ENST00000476594 NAA16Q6N069 864 aaPredicted RBP12.47□□□□□ -0.41
CCM2-208ENST00000476594 RHPN1Q8TCX5 695 aa12.47□□□□□ -0.41
CCM2-208ENST00000476594 NSUN4Q96CB9 384 aaKnown RBP12.47□□□□□ -0.41
CCM2-208ENST00000476594 OPTNQ96CV9 577 aa12.47□□□□□ -0.41
CCM2-208ENST00000476594 CLMNQ96JQ2 1002 aa12.47□□□□□ -0.41
CCM2-208ENST00000476594 CCDC8Q9H0W5 538 aaPredicted RBP12.47□□□□□ -0.41
CCM2-208ENST00000476594 DBNLQ9UJU6 430 aaKnown RBP12.47□□□□□ -0.41
CCM2-208ENST00000476594 FZD1Q9UP38 647 aa12.47□□□□□ -0.41
CCM2-208ENST00000476594 NPM3O75607 178 aaKnown RBP12.46□□□□□ -0.41
CCM2-208ENST00000476594 RGS3P49796 1198 aa12.46□□□□□ -0.41
CCM2-208ENST00000476594 TTF1Q15361 905 aaPredicted RBP12.46□□□□□ -0.41
CCM2-208ENST00000476594 NOM1Q5C9Z4 860 aaKnown RBP12.46□□□□□ -0.41
CCM2-208ENST00000476594 PI16Q6UXB8 463 aa12.46□□□□□ -0.41
CCM2-208ENST00000476594 ERO1BQ86YB8 467 aa12.46□□□□□ -0.41
CCM2-208ENST00000476594 EAF2Q96CJ1 260 aaPredicted RBP12.46□□□□□ -0.41
CCM2-208ENST00000476594 CFHR5Q9BXR6 569 aa12.46□□□□□ -0.41
CCM2-208ENST00000476594 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.46□□□□□ -0.41
CCM2-208ENST00000476594 AK9Q5TCS8 1911 aa12.46□□□□□ -0.42
CCM2-208ENST00000476594 SPDYE5A6NIY4 337 aa12.45□□□□□ -0.42
CCM2-208ENST00000476594 MAP3K12Q12852 859 aa12.45□□□□□ -0.42
CCM2-208ENST00000476594 NFIAQ12857 509 aa12.45□□□□□ -0.42
CCM2-208ENST00000476594 PICALMQ13492 652 aa12.45□□□□□ -0.42
CCM2-208ENST00000476594 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.45□□□□□ -0.42
CCM2-208ENST00000476594 TBC1D9Q6ZT07 1266 aa12.45□□□□□ -0.42
CCM2-208ENST00000476594 IFNL1Q8IU54 200 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms