RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 IRF6O14896 467 aa13.53□□□□□ -0.24
CDRT1-205ENST00000475944 RFX5P48382 616 aaPredicted RBP13.53□□□□□ -0.24
CDRT1-205ENST00000475944 SLFN5Q08AF3 891 aa13.53□□□□□ -0.24
CDRT1-205ENST00000475944 FAM151AQ8WW52 585 aa13.53□□□□□ -0.24
CDRT1-205ENST00000475944 SMC4Q9NTJ3 1288 aa13.53□□□□□ -0.24
CDRT1-205ENST00000475944 FBXO3Q9UK99 471 aa13.53□□□□□ -0.24
CDRT1-205ENST00000475944 PTCH2Q9Y6C5 1203 aa13.53□□□□□ -0.24
CDRT1-205ENST00000475944 UBTFL1P0CB47 393 aaPredicted RBP13.52□□□□□ -0.25
CDRT1-205ENST00000475944 EN2P19622 333 aaPredicted RBP13.52□□□□□ -0.25
CDRT1-205ENST00000475944 PPATQ06203 517 aa13.52□□□□□ -0.25
CDRT1-205ENST00000475944 GNL3LQ9NVN8 582 aaKnown RBP13.52□□□□□ -0.25
CDRT1-205ENST00000475944 CIAO1O76071 339 aa13.51□□□□□ -0.25
CDRT1-205ENST00000475944 GNRH1P01148 92 aa13.51□□□□□ -0.25
CDRT1-205ENST00000475944 LDHBP07195 334 aaKnown RBP13.51□□□□□ -0.25
CDRT1-205ENST00000475944 INPP5BP32019 993 aa13.51□□□□□ -0.25
CDRT1-205ENST00000475944 LACTBP83111 547 aaPredicted RBP13.51□□□□□ -0.25
CDRT1-205ENST00000475944 ATP2B3Q16720 1220 aa13.51□□□□□ -0.25
CDRT1-205ENST00000475944 MIGA2Q7L4E1 593 aa13.51□□□□□ -0.25
CDRT1-205ENST00000475944 ATG9AQ7Z3C6 839 aa13.51□□□□□ -0.25
CDRT1-205ENST00000475944 CEP126Q9P2H0 1117 aa13.51□□□□□ -0.25
CDRT1-205ENST00000475944 HDAC5Q9UQL6 1122 aa13.51□□□□□ -0.25
CDRT1-205ENST00000475944 DAGLAQ9Y4D2 1042 aa13.51□□□□□ -0.25
CDRT1-205ENST00000475944 SEMA3EO15041 775 aa13.5□□□□□ -0.25
CDRT1-205ENST00000475944 PRDX5P30044 214 aa13.5□□□□□ -0.25
CDRT1-205ENST00000475944 PRMT2P55345 433 aa13.5□□□□□ -0.25
CDRT1-205ENST00000475944 TCP10Q12799 353 aa13.5□□□□□ -0.25
CDRT1-205ENST00000475944 DIXDC1Q155Q3 683 aa13.5□□□□□ -0.25
CDRT1-205ENST00000475944 SLC4A8Q2Y0W8 1093 aa13.5□□□□□ -0.25
CDRT1-205ENST00000475944 CDC42EP5Q6NZY7 148 aa13.5□□□□□ -0.25
CDRT1-205ENST00000475944 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.5□□□□□ -0.25
CDRT1-205ENST00000475944 SIL1Q9H173 461 aa13.5□□□□□ -0.25
CDRT1-205ENST00000475944 SALL1Q9NSC2 1324 aa13.49□□□□□ -0.25
CDRT1-205ENST00000475944 ANKRD23Q86SG2 305 aa13.49□□□□□ -0.25
CDRT1-205ENST00000475944 ZGPATQ8N5A5 531 aaKnown RBP13.49□□□□□ -0.25
CDRT1-205ENST00000475944 ZNF112Q9UJU3 913 aa13.49□□□□□ -0.25
CDRT1-205ENST00000475944 DENND2AQ9ULE3 1009 aa13.49□□□□□ -0.25
CDRT1-205ENST00000475944 CT47B1P0C2W7 299 aaPredicted RBP13.48□□□□□ -0.25
CDRT1-205ENST00000475944 IL15P40933 162 aaPredicted RBP13.48□□□□□ -0.25
CDRT1-205ENST00000475944 NFIAQ12857 509 aa13.48□□□□□ -0.25
CDRT1-205ENST00000475944 NOL9Q5SY16 702 aaKnown RBP13.48□□□□□ -0.25
CDRT1-205ENST00000475944 C17orf99Q6UX52 265 aa13.48□□□□□ -0.25
CDRT1-205ENST00000475944 ARHGAP39Q9C0H5 1083 aa13.48□□□□□ -0.25
CDRT1-205ENST00000475944 KCNH4Q9UQ05 1017 aa13.48□□□□□ -0.25
CDRT1-205ENST00000475944 PDHXO00330 501 aa13.47□□□□□ -0.25
CDRT1-205ENST00000475944 ZBTB22O15209 634 aa13.47□□□□□ -0.25
CDRT1-205ENST00000475944 HOXD10P28358 340 aa13.47□□□□□ -0.25
CDRT1-205ENST00000475944 PHKA1P46020 1223 aa13.47□□□□□ -0.25
CDRT1-205ENST00000475944 HABP4Q5JVS0 413 aaKnown RBP13.47□□□□□ -0.25
CDRT1-205ENST00000475944 SH3TC2Q8TF17 1288 aa13.47□□□□□ -0.25
CDRT1-205ENST00000475944 CDCA7LQ96GN5 454 aa13.47□□□□□ -0.25
CDRT1-205ENST00000475944 API5Q9BZZ5 524 aaKnown RBP13.47□□□□□ -0.25
CDRT1-205ENST00000475944 USP40Q9NVE5 1235 aa13.47□□□□□ -0.25
CDRT1-205ENST00000475944 FAM198AQ9UFP1 575 aa13.47□□□□□ -0.25
CDRT1-205ENST00000475944 CPA4Q9UI42 421 aa13.47□□□□□ -0.25
CDRT1-205ENST00000475944 ZSWIM8A7E2V4 1837 aa13.47□□□□□ -0.25
CDRT1-205ENST00000475944 AK9Q5TCS8 1911 aa13.47□□□□□ -0.25
CDRT1-205ENST00000475944 CENPFP49454 3210 aa13.46□□□□□ -0.25
CDRT1-205ENST00000475944 MYCP01106 439 aaPredicted RBP13.46□□□□□ -0.25
CDRT1-205ENST00000475944 PSMC4P43686 418 aa13.46□□□□□ -0.25
CDRT1-205ENST00000475944 SLF2Q8IX21 1173 aa13.46□□□□□ -0.25
CDRT1-205ENST00000475944 SRRDQ9UH36 339 aa13.46□□□□□ -0.25
CDRT1-205ENST00000475944 NOB1Q9ULX3 412 aaKnown RBP13.46□□□□□ -0.25
CDRT1-205ENST00000475944 LRRFIP2Q9Y608 721 aaKnown RBP13.46□□□□□ -0.25
CDRT1-205ENST00000475944 KIAA0100Q14667 2235 aaKnown RBP13.45□□□□□ -0.26
CDRT1-205ENST00000475944 ADGRA2Q96PE1 1338 aa13.45□□□□□ -0.26
CDRT1-205ENST00000475944 CXCL11O14625 94 aa13.45□□□□□ -0.26
CDRT1-205ENST00000475944 ENTPD3O75355 529 aa13.45□□□□□ -0.26
CDRT1-205ENST00000475944 FMNL1O95466 1100 aaPredicted RBP13.45□□□□□ -0.26
CDRT1-205ENST00000475944 CCDC102BQ68D86 513 aa13.45□□□□□ -0.26
CDRT1-205ENST00000475944 DZIP1Q86YF9 867 aaKnown RBP13.45□□□□□ -0.26
CDRT1-205ENST00000475944 TRMT2AQ8IZ69 625 aaKnown RBP13.45□□□□□ -0.26
CDRT1-205ENST00000475944 PARK7Q99497 189 aaKnown RBP13.45□□□□□ -0.26
CDRT1-205ENST00000475944 IDI2Q9BXS1 227 aa13.45□□□□□ -0.26
CDRT1-205ENST00000475944 COPRSQ9NQ92 184 aa13.45□□□□□ -0.26
CDRT1-205ENST00000475944 PA2G4Q9UQ80 394 aaKnown RBP13.45□□□□□ -0.26
CDRT1-205ENST00000475944 DOCK2Q92608 1830 aa13.45□□□□□ -0.26
CDRT1-205ENST00000475944 GAKO14976 1311 aa13.44□□□□□ -0.26
CDRT1-205ENST00000475944 PDS5AQ29RF7 1337 aaKnown RBP13.44□□□□□ -0.26
CDRT1-205ENST00000475944 ECM2O94769 699 aaPredicted RBP13.44□□□□□ -0.26
CDRT1-205ENST00000475944 RGS3P49796 1198 aa13.44□□□□□ -0.26
CDRT1-205ENST00000475944 SPTY2D1Q68D10 685 aaPredicted RBP13.44□□□□□ -0.26
CDRT1-205ENST00000475944 FASTKD5Q7L8L6 764 aaKnown RBP13.44□□□□□ -0.26
CDRT1-205ENST00000475944 ZSCAN29Q8IWY8 852 aaPredicted RBP13.44□□□□□ -0.26
CDRT1-205ENST00000475944 RAET1EQ8TD07 263 aa13.44□□□□□ -0.26
CDRT1-205ENST00000475944 TRIM47Q96LD4 638 aa13.44□□□□□ -0.26
CDRT1-205ENST00000475944 PICK1Q9NRD5 415 aa13.44□□□□□ -0.26
CDRT1-205ENST00000475944 ABCF2Q9UG63 623 aa13.44□□□□□ -0.26
CDRT1-205ENST00000475944 MKI67P46013 3256 aaKnown RBP13.44□□□□□ -0.26
CDRT1-205ENST00000475944 ATRNL1Q5VV63 1379 aa13.44□□□□□ -0.26
CDRT1-205ENST00000475944 MYPNQ86TC9 1320 aa13.43□□□□□ -0.26
CDRT1-205ENST00000475944 MYH2Q9UKX2 1941 aa13.43□□□□□ -0.26
CDRT1-205ENST00000475944 OSBPP22059 807 aa13.43□□□□□ -0.26
CDRT1-205ENST00000475944 CTGFP29279 349 aa13.43□□□□□ -0.26
CDRT1-205ENST00000475944 ADORA1P30542 326 aa13.43□□□□□ -0.26
CDRT1-205ENST00000475944 GRK4P32298 578 aa13.43□□□□□ -0.26
CDRT1-205ENST00000475944 MOGSQ13724 837 aa13.43□□□□□ -0.26
CDRT1-205ENST00000475944 RASGRF1Q13972 1273 aa13.43□□□□□ -0.26
CDRT1-205ENST00000475944 ZFPM1Q8IX07 1006 aa13.43□□□□□ -0.26
CDRT1-205ENST00000475944 SCYL3Q8IZE3 742 aa13.43□□□□□ -0.26
CDRT1-205ENST00000475944 NKX2-3Q8TAU0 364 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms