RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 PPP1R12BO60237 982 aaPredicted RBP17.62■□□□□ 0.41
ABCF3-211ENST00000475728 ZAP70P43403 619 aa17.62■□□□□ 0.41
ABCF3-211ENST00000475728 VEGFBP49765 207 aa17.62■□□□□ 0.41
ABCF3-211ENST00000475728 PRAMEF18Q5VWM3 479 aa17.62■□□□□ 0.41
ABCF3-211ENST00000475728 TBC1D9Q6ZT07 1266 aa17.62■□□□□ 0.41
ABCF3-211ENST00000475728 HOOK2Q96ED9 719 aa17.62■□□□□ 0.41
ABCF3-211ENST00000475728 CAPNS2Q96L46 248 aa17.62■□□□□ 0.41
ABCF3-211ENST00000475728 NOL10Q9BSC4 688 aaKnown RBP17.62■□□□□ 0.41
ABCF3-211ENST00000475728 ZBTB47Q9UFB7 747 aaPredicted RBP17.62■□□□□ 0.41
ABCF3-211ENST00000475728 ECM29Q5VYK3 1845 aa17.62■□□□□ 0.41
ABCF3-211ENST00000475728 MROH7-TTC4A0A0A0MT08 1334 aa17.62■□□□□ 0.41
ABCF3-211ENST00000475728 AOX1Q06278 1338 aa17.62■□□□□ 0.41
ABCF3-211ENST00000475728 CYP2E1P05181 493 aaPredicted RBP17.61■□□□□ 0.41
ABCF3-211ENST00000475728 HDAC1Q13547 482 aaPredicted RBP17.61■□□□□ 0.41
ABCF3-211ENST00000475728 TTF1Q15361 905 aaPredicted RBP17.61■□□□□ 0.41
ABCF3-211ENST00000475728 RGMBQ6NW40 437 aa17.61■□□□□ 0.41
ABCF3-211ENST00000475728 CCDC102AQ96A19 550 aa17.61■□□□□ 0.41
ABCF3-211ENST00000475728 NSUN4Q96CB9 384 aaKnown RBP17.61■□□□□ 0.41
ABCF3-211ENST00000475728 GPATCH3Q96I76 525 aa17.61■□□□□ 0.41
ABCF3-211ENST00000475728 BCL11AQ9H165 835 aa17.61■□□□□ 0.41
ABCF3-211ENST00000475728 USP40Q9NVE5 1235 aa17.61■□□□□ 0.41
ABCF3-211ENST00000475728 WDR33Q9C0J8 1336 aaKnown RBP17.61■□□□□ 0.41
ABCF3-211ENST00000475728 PAPPA2Q9BXP8 1791 aa17.61■□□□□ 0.41
ABCF3-211ENST00000475728 NAA16Q6N069 864 aaPredicted RBP17.6■□□□□ 0.41
ABCF3-211ENST00000475728 CDC42EP5Q6NZY7 148 aa17.6■□□□□ 0.41
ABCF3-211ENST00000475728 GCC1Q96CN9 775 aa17.6■□□□□ 0.41
ABCF3-211ENST00000475728 GPR75-ASB3A0A0A6YYF3 556 aa17.59■□□□□ 0.41
ABCF3-211ENST00000475728 UNCXA6NJT0 531 aa17.59■□□□□ 0.41
ABCF3-211ENST00000475728 MAP3K12Q12852 859 aa17.59■□□□□ 0.41
ABCF3-211ENST00000475728 CYP4F22Q6NT55 531 aa17.59■□□□□ 0.41
ABCF3-211ENST00000475728 RWDD1Q9H446 243 aaPredicted RBP17.59■□□□□ 0.41
ABCF3-211ENST00000475728 RPAP1Q9BWH6 1393 aaPredicted RBP17.58■□□□□ 0.4
ABCF3-211ENST00000475728 BAG3O95817 575 aa17.58■□□□□ 0.4
ABCF3-211ENST00000475728 PLCG2P16885 1265 aa17.58■□□□□ 0.4
ABCF3-211ENST00000475728 ATP5JP18859 108 aa17.58■□□□□ 0.4
ABCF3-211ENST00000475728 MAP2K2P36507 400 aa17.58■□□□□ 0.4
ABCF3-211ENST00000475728 BTDP43251 543 aa17.58■□□□□ 0.4
ABCF3-211ENST00000475728 ZNF157P51786 506 aaPredicted RBP17.58■□□□□ 0.4
ABCF3-211ENST00000475728 CACNB3P54284 484 aa17.58■□□□□ 0.4
ABCF3-211ENST00000475728 NOGQ13253 232 aa17.58■□□□□ 0.4
ABCF3-211ENST00000475728 GRM1Q13255 1194 aa17.58■□□□□ 0.4
ABCF3-211ENST00000475728 NBPF12Q5TAG4 269 aaPredicted RBP17.58■□□□□ 0.4
ABCF3-211ENST00000475728 CERS3Q8IU89 383 aa17.58■□□□□ 0.4
ABCF3-211ENST00000475728 EXOC6Q8TAG9 804 aa17.58■□□□□ 0.4
ABCF3-211ENST00000475728 FAM151AQ8WW52 585 aa17.58■□□□□ 0.4
ABCF3-211ENST00000475728 PIH1D3Q9NQM4 214 aaKnown RBP17.58■□□□□ 0.4
ABCF3-211ENST00000475728 UBE2Q2LH0YL09 131 aa17.57■□□□□ 0.4
ABCF3-211ENST00000475728 SMARCA5O60264 1052 aaPredicted RBP17.57■□□□□ 0.4
ABCF3-211ENST00000475728 ENTPD3O75355 529 aa17.57■□□□□ 0.4
ABCF3-211ENST00000475728 IDH1O75874 414 aaKnown RBP17.57■□□□□ 0.4
ABCF3-211ENST00000475728 IREB2P48200 963 aaKnown RBP17.57■□□□□ 0.4
ABCF3-211ENST00000475728 MLLT1Q03111 559 aaPredicted RBP17.57■□□□□ 0.4
ABCF3-211ENST00000475728 MAP3K11Q16584 847 aa17.57■□□□□ 0.4
ABCF3-211ENST00000475728 TEPSINQ96N21 525 aa17.57■□□□□ 0.4
ABCF3-211ENST00000475728 IDI2Q9BXS1 227 aa17.57■□□□□ 0.4
ABCF3-211ENST00000475728 TMEM39BQ9GZU3 492 aa17.57■□□□□ 0.4
ABCF3-211ENST00000475728 WBP1LQ9NX94 342 aa17.57■□□□□ 0.4
ABCF3-211ENST00000475728 ANGEL1Q9UNK9 670 aaKnown RBP17.57■□□□□ 0.4
ABCF3-211ENST00000475728 HSPA8P11142 646 aaKnown RBP17.56■□□□□ 0.4
ABCF3-211ENST00000475728 MAP2K1Q02750 393 aaPredicted RBP17.56■□□□□ 0.4
ABCF3-211ENST00000475728 PRKG1Q13976 671 aa17.56■□□□□ 0.4
ABCF3-211ENST00000475728 DCAF15Q66K64 600 aa17.56■□□□□ 0.4
ABCF3-211ENST00000475728 ZNF384Q8TF68 577 aa17.56■□□□□ 0.4
ABCF3-211ENST00000475728 ECHDC1Q9NTX5 307 aa17.56■□□□□ 0.4
ABCF3-211ENST00000475728 CCDC85CA6NKD9 419 aa17.55■□□□□ 0.4
ABCF3-211ENST00000475728 NPM3O75607 178 aaKnown RBP17.55■□□□□ 0.4
ABCF3-211ENST00000475728 LDLRAD1Q5T700 205 aa17.55■□□□□ 0.4
ABCF3-211ENST00000475728 DNAJC2Q99543 621 aaKnown RBP17.55■□□□□ 0.4
ABCF3-211ENST00000475728 HAUS7Q99871 368 aa17.55■□□□□ 0.4
ABCF3-211ENST00000475728 AKAP11Q9UKA4 1901 aa17.55■□□□□ 0.4
ABCF3-211ENST00000475728 GOLIM4O00461 696 aa17.54■□□□□ 0.4
ABCF3-211ENST00000475728 SLC10A3P09131 477 aa17.54■□□□□ 0.4
ABCF3-211ENST00000475728 CYP7A1P22680 504 aa17.54■□□□□ 0.4
ABCF3-211ENST00000475728 RGS3P49796 1198 aa17.54■□□□□ 0.4
ABCF3-211ENST00000475728 PPP4CP60510 307 aa17.54■□□□□ 0.4
ABCF3-211ENST00000475728 TCP10Q12799 353 aa17.54■□□□□ 0.4
ABCF3-211ENST00000475728 MOB2Q70IA6 237 aa17.54■□□□□ 0.4
ABCF3-211ENST00000475728 REM2Q8IYK8 340 aaPredicted RBP17.54■□□□□ 0.4
ABCF3-211ENST00000475728 BOLA2Q9H3K6 86 aa17.54■□□□□ 0.4
ABCF3-211ENST00000475728 PAG1Q9NWQ8 432 aa17.54■□□□□ 0.4
ABCF3-211ENST00000475728 FAM198AQ9UFP1 575 aa17.54■□□□□ 0.4
ABCF3-211ENST00000475728 MYH2Q9UKX2 1941 aa17.54■□□□□ 0.4
ABCF3-211ENST00000475728 SSC5DA1L4H1 1573 aa17.53■□□□□ 0.4
ABCF3-211ENST00000475728 ERC2O15083 957 aa17.53■□□□□ 0.4
ABCF3-211ENST00000475728 RHBDL3P58872 404 aa17.53■□□□□ 0.4
ABCF3-211ENST00000475728 NFIAQ12857 509 aa17.53■□□□□ 0.4
ABCF3-211ENST00000475728 ANKRD45Q5TZF3 282 aa17.53■□□□□ 0.4
ABCF3-211ENST00000475728 TEX11Q8IYF3 940 aa17.53■□□□□ 0.4
ABCF3-211ENST00000475728 ANKRD13AQ8IZ07 590 aa17.53■□□□□ 0.4
ABCF3-211ENST00000475728 MAGEB6Q8N7X4 407 aa17.53■□□□□ 0.4
ABCF3-211ENST00000475728 SLC10A4Q96EP9 437 aa17.53■□□□□ 0.4
ABCF3-211ENST00000475728 BEGAINQ9BUH8 593 aa17.53■□□□□ 0.4
ABCF3-211ENST00000475728 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.53■□□□□ 0.43e-6■■■■■ 34.1
ABCF3-211ENST00000475728 ANTXR1Q9H6X2 564 aa17.53■□□□□ 0.4
ABCF3-211ENST00000475728 MAST2Q6P0Q8 1798 aa17.53■□□□□ 0.4
ABCF3-211ENST00000475728 TTC41PQ6P2S7 1318 aa17.52■□□□□ 0.4
ABCF3-211ENST00000475728 FAM155AB1AL88 458 aaPredicted RBP17.52■□□□□ 0.4
ABCF3-211ENST00000475728 USP2O75604 605 aaPredicted RBP17.52■□□□□ 0.4
ABCF3-211ENST00000475728 WDHD1O75717 1129 aaPredicted RBP17.52■□□□□ 0.4
ABCF3-211ENST00000475728 RASAL3Q86YV0 1011 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms