RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 MIGA2Q7L4E1 593 aa31.1■■■□□ 2.57
TMEM54-205ENST00000475208 CDCA7LQ96GN5 454 aa31.1■■■□□ 2.57
TMEM54-205ENST00000475208 SIL1Q9H173 461 aa31.1■■■□□ 2.57
TMEM54-205ENST00000475208 ZCCHC17Q9NP64 241 aaKnown RBP31.1■■■□□ 2.57
TMEM54-205ENST00000475208 DAGLAQ9Y4D2 1042 aa31.1■■■□□ 2.57
TMEM54-205ENST00000475208 PTCH2Q9Y6C5 1203 aa31.1■■■□□ 2.57
TMEM54-205ENST00000475208 UBTFL1P0CB47 393 aaPredicted RBP31.09■■■□□ 2.57
TMEM54-205ENST00000475208 ZNF333Q96JL9 665 aa31.09■■■□□ 2.57
TMEM54-205ENST00000475208 TLR2O60603 784 aa31.08■■■□□ 2.57
TMEM54-205ENST00000475208 EN2P19622 333 aaPredicted RBP31.08■■■□□ 2.57
TMEM54-205ENST00000475208 DIXDC1Q155Q3 683 aa31.08■■■□□ 2.57
TMEM54-205ENST00000475208 ATP2B3Q16720 1220 aa31.08■■■□□ 2.57
TMEM54-205ENST00000475208 FAM151AQ8WW52 585 aa31.08■■■□□ 2.57
TMEM54-205ENST00000475208 CIAO1O76071 339 aa31.07■■■□□ 2.56
TMEM54-205ENST00000475208 PRDX5P30044 214 aa31.07■■■□□ 2.56
TMEM54-205ENST00000475208 INPP5BP32019 993 aa31.07■■■□□ 2.56
TMEM54-205ENST00000475208 SLC9C1Q4G0N8 1177 aa31.07■■■□□ 2.56
TMEM54-205ENST00000475208 FBXO3Q9UK99 471 aa31.07■■■□□ 2.56
TMEM54-205ENST00000475208 BRCA2P51587 3418 aa31.07■■■□□ 2.56
TMEM54-205ENST00000475208 PPATQ06203 517 aa31.06■■■□□ 2.56
TMEM54-205ENST00000475208 TCP10Q12799 353 aa31.06■■■□□ 2.56
TMEM54-205ENST00000475208 CDC42EP5Q6NZY7 148 aa31.06■■■□□ 2.56
TMEM54-205ENST00000475208 TMEM106CQ9BVX2 250 aa31.06■■■□□ 2.56
TMEM54-205ENST00000475208 CEP126Q9P2H0 1117 aa31.06■■■□□ 2.56
TMEM54-205ENST00000475208 ARHGAP39Q9C0H5 1083 aa31.05■■■□□ 2.56
TMEM54-205ENST00000475208 GNL3LQ9NVN8 582 aaKnown RBP31.05■■■□□ 2.56
TMEM54-205ENST00000475208 ZSWIM8A7E2V4 1837 aa31.05■■■□□ 2.56
TMEM54-205ENST00000475208 LDHBP07195 334 aaKnown RBP31.04■■■□□ 2.56
TMEM54-205ENST00000475208 NFIAQ12857 509 aa31.04■■■□□ 2.56
TMEM54-205ENST00000475208 KIF22Q14807 665 aa31.04■■■□□ 2.56
TMEM54-205ENST00000475208 NBPF11Q86T75 865 aa31.04■■■□□ 2.56
TMEM54-205ENST00000475208 GCC1Q96CN9 775 aa31.04■■■□□ 2.56
TMEM54-205ENST00000475208 LACTBP83111 547 aaPredicted RBP31.03■■■□□ 2.56
TMEM54-205ENST00000475208 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.03■■■□□ 2.56
TMEM54-205ENST00000475208 ZNF112Q9UJU3 913 aa31.02■■■□□ 2.56
TMEM54-205ENST00000475208 NOB1Q9ULX3 412 aaKnown RBP31.02■■■□□ 2.56
TMEM54-205ENST00000475208 LRRFIP2Q9Y608 721 aaKnown RBP31.02■■■□□ 2.56
TMEM54-205ENST00000475208 SALL1Q9NSC2 1324 aa31.01■■■□□ 2.56
TMEM54-205ENST00000475208 PHKA1P46020 1223 aa31.01■■■□□ 2.55
TMEM54-205ENST00000475208 TRMT2AQ8IZ69 625 aaKnown RBP31.01■■■□□ 2.55
TMEM54-205ENST00000475208 USP40Q9NVE5 1235 aa31.01■■■□□ 2.55
TMEM54-205ENST00000475208 FAM198AQ9UFP1 575 aa31.01■■■□□ 2.55
TMEM54-205ENST00000475208 DENND2AQ9ULE3 1009 aa31.01■■■□□ 2.55
TMEM54-205ENST00000475208 PA2G4Q9UQ80 394 aaKnown RBP31.01■■■□□ 2.55
TMEM54-205ENST00000475208 IL15P40933 162 aaPredicted RBP31■■■□□ 2.55
TMEM54-205ENST00000475208 AK9Q5TCS8 1911 aa31■■■□□ 2.55
TMEM54-205ENST00000475208 SEMA3EO15041 775 aa30.99■■■□□ 2.55
TMEM54-205ENST00000475208 SLC4A8Q2Y0W8 1093 aa30.99■■■□□ 2.55
TMEM54-205ENST00000475208 API5Q9BZZ5 524 aaKnown RBP30.99■■■□□ 2.55
TMEM54-205ENST00000475208 KCNH4Q9UQ05 1017 aa30.99■■■□□ 2.55
TMEM54-205ENST00000475208 MYCP01106 439 aaPredicted RBP30.98■■■□□ 2.55
TMEM54-205ENST00000475208 CT47B1P0C2W7 299 aaPredicted RBP30.98■■■□□ 2.55
TMEM54-205ENST00000475208 NOL9Q5SY16 702 aaKnown RBP30.98■■■□□ 2.55
TMEM54-205ENST00000475208 C17orf99Q6UX52 265 aa30.98■■■□□ 2.55
TMEM54-205ENST00000475208 ANKRD23Q86SG2 305 aa30.98■■■□□ 2.55
TMEM54-205ENST00000475208 SH3TC2Q8TF17 1288 aa30.98■■■□□ 2.55
TMEM54-205ENST00000475208 CPA4Q9UI42 421 aa30.98■■■□□ 2.55
TMEM54-205ENST00000475208 HDAC5Q9UQL6 1122 aa30.98■■■□□ 2.55
TMEM54-205ENST00000475208 PDHXO00330 501 aa30.97■■■□□ 2.55
TMEM54-205ENST00000475208 ECM2O94769 699 aaPredicted RBP30.97■■■□□ 2.55
TMEM54-205ENST00000475208 ADORA1P30542 326 aa30.97■■■□□ 2.55
TMEM54-205ENST00000475208 GNRH1P01148 92 aa30.96■■■□□ 2.55
TMEM54-205ENST00000475208 ZFPM1Q8IX07 1006 aa30.96■■■□□ 2.55
TMEM54-205ENST00000475208 MEIS3Q99687 375 aa30.96■■■□□ 2.55
TMEM54-205ENST00000475208 COPRSQ9NQ92 184 aa30.96■■■□□ 2.55
TMEM54-205ENST00000475208 PRMT2P55345 433 aa30.95■■■□□ 2.55
TMEM54-205ENST00000475208 CCDC102BQ68D86 513 aa30.95■■■□□ 2.55
TMEM54-205ENST00000475208 MOGSQ13724 837 aa30.94■■■□□ 2.54
TMEM54-205ENST00000475208 ZGPATQ8N5A5 531 aaKnown RBP30.94■■■□□ 2.54
TMEM54-205ENST00000475208 ADGRA2Q96PE1 1338 aa30.94■■■□□ 2.54
TMEM54-205ENST00000475208 DOCK2Q92608 1830 aa30.94■■■□□ 2.54
TMEM54-205ENST00000475208 ATRNL1Q5VV63 1379 aa30.93■■■□□ 2.54
TMEM54-205ENST00000475208 RGS3P49796 1198 aa30.93■■■□□ 2.54
TMEM54-205ENST00000475208 HABP4Q5JVS0 413 aaKnown RBP30.93■■■□□ 2.54
TMEM54-205ENST00000475208 GAKO14976 1311 aa30.93■■■□□ 2.54
TMEM54-205ENST00000475208 MYH2Q9UKX2 1941 aa30.92■■■□□ 2.54
TMEM54-205ENST00000475208 ZBTB22O15209 634 aa30.92■■■□□ 2.54
TMEM54-205ENST00000475208 CTGFP29279 349 aa30.92■■■□□ 2.54
TMEM54-205ENST00000475208 PSMC4P43686 418 aa30.92■■■□□ 2.54
TMEM54-205ENST00000475208 DZIP1Q86YF9 867 aaKnown RBP30.92■■■□□ 2.54
TMEM54-205ENST00000475208 RFX7Q2KHR2 1363 aa30.92■■■□□ 2.54
TMEM54-205ENST00000475208 RASGRF1Q13972 1273 aa30.91■■■□□ 2.54
TMEM54-205ENST00000475208 TRIM47Q96LD4 638 aa30.91■■■□□ 2.54
TMEM54-205ENST00000475208 IDI2Q9BXS1 227 aa30.91■■■□□ 2.54
TMEM54-205ENST00000475208 ENTPD3O75355 529 aa30.9■■■□□ 2.54
TMEM54-205ENST00000475208 TIMM10P62072 90 aa30.9■■■□□ 2.54
TMEM54-205ENST00000475208 ABCF2Q9UG63 623 aa30.9■■■□□ 2.54
TMEM54-205ENST00000475208 SRRDQ9UH36 339 aa30.9■■■□□ 2.54
TMEM54-205ENST00000475208 PHF20L1A8MW92 1017 aa30.89■■■□□ 2.54
TMEM54-205ENST00000475208 CXCL11O14625 94 aa30.89■■■□□ 2.54
TMEM54-205ENST00000475208 PARK7Q99497 189 aaKnown RBP30.89■■■□□ 2.54
TMEM54-205ENST00000475208 PDS5AQ29RF7 1337 aaKnown RBP30.89■■■□□ 2.54
TMEM54-205ENST00000475208 FMNL1O95466 1100 aaPredicted RBP30.88■■■□□ 2.53
TMEM54-205ENST00000475208 OSBPP22059 807 aa30.88■■■□□ 2.53
TMEM54-205ENST00000475208 SH3BP5LQ7L8J4 393 aa30.88■■■□□ 2.53
TMEM54-205ENST00000475208 ZSCAN29Q8IWY8 852 aaPredicted RBP30.88■■■□□ 2.53
TMEM54-205ENST00000475208 SCYL3Q8IZE3 742 aa30.88■■■□□ 2.53
TMEM54-205ENST00000475208 A0A1B0GUL7 405 aa30.87■■■□□ 2.53
TMEM54-205ENST00000475208 HOXD10P28358 340 aa30.87■■■□□ 2.53
TMEM54-205ENST00000475208 RARSP54136 660 aaKnown RBP30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms