RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 PHIPQ8WWQ0 1821 aa17.55■□□□□ 0.4
CCDC78-209ENST00000474647 TLR2O60603 784 aa17.54■□□□□ 0.4
CCDC78-209ENST00000474647 LACTBP83111 547 aaPredicted RBP17.54■□□□□ 0.4
CCDC78-209ENST00000474647 PPIL2Q13356 520 aa17.54■□□□□ 0.4
CCDC78-209ENST00000474647 APOBEC3HQ6NTF7 200 aaKnown RBP17.54■□□□□ 0.4
CCDC78-209ENST00000474647 MIGA2Q7L4E1 593 aa17.54■□□□□ 0.4
CCDC78-209ENST00000474647 MRPL50Q8N5N7 158 aaKnown RBP17.54■□□□□ 0.4
CCDC78-209ENST00000474647 PTPRCP08575 1304 aa17.53■□□□□ 0.4
CCDC78-209ENST00000474647 SLC5A1P13866 664 aa17.53■□□□□ 0.4
CCDC78-209ENST00000474647 ZNF341Q9BYN7 854 aa17.53■□□□□ 0.4
CCDC78-209ENST00000474647 KIF16BQ96L93 1317 aa17.52■□□□□ 0.4
CCDC78-209ENST00000474647 TCP10Q12799 353 aa17.52■□□□□ 0.4
CCDC78-209ENST00000474647 FKBP1CQ5VVH2 108 aa17.52■□□□□ 0.4
CCDC78-209ENST00000474647 HHIPL2Q6UWX4 724 aa17.52■□□□□ 0.4
CCDC78-209ENST00000474647 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.52■□□□□ 0.4
CCDC78-209ENST00000474647 ZCCHC17Q9NP64 241 aaKnown RBP17.52■□□□□ 0.4
CCDC78-209ENST00000474647 SUGT1Q9Y2Z0 365 aa17.52■□□□□ 0.4
CCDC78-209ENST00000474647 FGFR2P21802 821 aa17.51■□□□□ 0.39
CCDC78-209ENST00000474647 INPP5BP32019 993 aa17.51■□□□□ 0.39
CCDC78-209ENST00000474647 PPATQ06203 517 aa17.51■□□□□ 0.39
CCDC78-209ENST00000474647 WDR66Q8TBY9 1149 aa17.51■□□□□ 0.39
CCDC78-209ENST00000474647 CPA4Q9UI42 421 aa17.51■□□□□ 0.39
CCDC78-209ENST00000474647 DOCK3Q8IZD9 2030 aa17.5■□□□□ 0.39
CCDC78-209ENST00000474647 EYA2O00167 538 aa17.5■□□□□ 0.39
CCDC78-209ENST00000474647 DIXDC1Q155Q3 683 aa17.5■□□□□ 0.39
CCDC78-209ENST00000474647 MRIQ9BWK5 157 aa17.5■□□□□ 0.39
CCDC78-209ENST00000474647 USP44Q9H0E7 712 aa17.5■□□□□ 0.39
CCDC78-209ENST00000474647 SIL1Q9H173 461 aa17.5■□□□□ 0.39
CCDC78-209ENST00000474647 ZNF521Q96K83 1311 aa17.49■□□□□ 0.39
CCDC78-209ENST00000474647 GNRH1P01148 92 aa17.49■□□□□ 0.39
CCDC78-209ENST00000474647 FAM151AQ8WW52 585 aa17.49■□□□□ 0.39
CCDC78-209ENST00000474647 SSH1Q8WYL5 1049 aa17.49■□□□□ 0.39
CCDC78-209ENST00000474647 LPIN2Q92539 896 aa17.49■□□□□ 0.39
CCDC78-209ENST00000474647 DAGLAQ9Y4D2 1042 aa17.49■□□□□ 0.39
CCDC78-209ENST00000474647 PDHXO00330 501 aa17.48■□□□□ 0.39
CCDC78-209ENST00000474647 PRDX5P30044 214 aa17.48■□□□□ 0.39
CCDC78-209ENST00000474647 CDC42EP5Q6NZY7 148 aa17.48■□□□□ 0.39
CCDC78-209ENST00000474647 TRIOBPQ9H2D6 2365 aa17.48■□□□□ 0.39
CCDC78-209ENST00000474647 PSMC4P43686 418 aa17.47■□□□□ 0.39
CCDC78-209ENST00000474647 RFX5P48382 616 aaPredicted RBP17.47■□□□□ 0.39
CCDC78-209ENST00000474647 PRMT2P55345 433 aa17.47■□□□□ 0.39
CCDC78-209ENST00000474647 NFIAQ12857 509 aa17.47■□□□□ 0.39
CCDC78-209ENST00000474647 C17orf99Q6UX52 265 aa17.47■□□□□ 0.39
CCDC78-209ENST00000474647 ANKRD23Q86SG2 305 aa17.47■□□□□ 0.39
CCDC78-209ENST00000474647 COLQQ9Y215 455 aaPredicted RBP17.47■□□□□ 0.39
CCDC78-209ENST00000474647 CDK5RAP2Q96SN8 1893 aa17.46■□□□□ 0.39
CCDC78-209ENST00000474647 FMNL1O95466 1100 aaPredicted RBP17.46■□□□□ 0.39
CCDC78-209ENST00000474647 LDHBP07195 334 aaKnown RBP17.46■□□□□ 0.39
CCDC78-209ENST00000474647 CTGFP29279 349 aa17.46■□□□□ 0.39
CCDC78-209ENST00000474647 FXR1P51114 621 aaKnown RBP eCLIP17.46■□□□□ 0.39
CCDC78-209ENST00000474647 MTFR1Q15390 333 aa17.46■□□□□ 0.39
CCDC78-209ENST00000474647 ATP2B3Q16720 1220 aa17.46■□□□□ 0.39
CCDC78-209ENST00000474647 RAET1EQ8TD07 263 aa17.46■□□□□ 0.39
CCDC78-209ENST00000474647 TRIM47Q96LD4 638 aa17.46■□□□□ 0.39
CCDC78-209ENST00000474647 ALPK3Q96L96 1907 aa17.46■□□□□ 0.39
CCDC78-209ENST00000474647 MYPNQ86TC9 1320 aa17.46■□□□□ 0.38
CCDC78-209ENST00000474647 SZT2Q5T011 3432 aa17.45■□□□□ 0.38
CCDC78-209ENST00000474647 OSBPP22059 807 aa17.45■□□□□ 0.38
CCDC78-209ENST00000474647 ATG9AQ7Z3C6 839 aa17.45■□□□□ 0.38
CCDC78-209ENST00000474647 SMC4Q9NTJ3 1288 aa17.45■□□□□ 0.38
CCDC78-209ENST00000474647 USP40Q9NVE5 1235 aa17.45■□□□□ 0.38
CCDC78-209ENST00000474647 GNL3LQ9NVN8 582 aaKnown RBP17.45■□□□□ 0.38
CCDC78-209ENST00000474647 FAM198AQ9UFP1 575 aa17.45■□□□□ 0.38
CCDC78-209ENST00000474647 SRRDQ9UH36 339 aa17.45■□□□□ 0.38
CCDC78-209ENST00000474647 ZNF112Q9UJU3 913 aa17.45■□□□□ 0.38
CCDC78-209ENST00000474647 KCNH4Q9UQ05 1017 aa17.45■□□□□ 0.38
CCDC78-209ENST00000474647 ADGRA2Q96PE1 1338 aa17.45■□□□□ 0.38
CCDC78-209ENST00000474647 LOC285556D6RIA3 1793 aa17.44■□□□□ 0.38
CCDC78-209ENST00000474647 E9PSI1 815 aa17.44■□□□□ 0.38
CCDC78-209ENST00000474647 H0YGN5 161 aa17.44■□□□□ 0.38
CCDC78-209ENST00000474647 UBTFL1P0CB47 393 aaPredicted RBP17.44■□□□□ 0.38
CCDC78-209ENST00000474647 HOXD10P28358 340 aa17.44■□□□□ 0.38
CCDC78-209ENST00000474647 PARK7Q99497 189 aaKnown RBP17.44■□□□□ 0.38
CCDC78-209ENST00000474647 MYO5AQ9Y4I1 1855 aaKnown RBP17.44■□□□□ 0.38
CCDC78-209ENST00000474647 GRK4P32298 578 aa17.43■□□□□ 0.38
CCDC78-209ENST00000474647 NOL9Q5SY16 702 aaKnown RBP17.43■□□□□ 0.38
CCDC78-209ENST00000474647 SHISA4Q96DD7 197 aa17.43■□□□□ 0.38
CCDC78-209ENST00000474647 CEP126Q9P2H0 1117 aa17.43■□□□□ 0.38
CCDC78-209ENST00000474647 BIN2Q9UBW5 565 aaPredicted RBP17.43■□□□□ 0.38
CCDC78-209ENST00000474647 CYP2C8P10632 490 aa17.42■□□□□ 0.38
CCDC78-209ENST00000474647 PHKA1P46020 1223 aa17.42■□□□□ 0.38
CCDC78-209ENST00000474647 MOGSQ13724 837 aa17.42■□□□□ 0.38
CCDC78-209ENST00000474647 ZSCAN29Q8IWY8 852 aaPredicted RBP17.42■□□□□ 0.38
CCDC78-209ENST00000474647 ZFPM1Q8IX07 1006 aa17.42■□□□□ 0.38
CCDC78-209ENST00000474647 DPF3Q92784 378 aa17.42■□□□□ 0.38
CCDC78-209ENST00000474647 DENND2AQ9ULE3 1009 aa17.42■□□□□ 0.38
CCDC78-209ENST00000474647 FOCADQ5VW36 1801 aa17.42■□□□□ 0.38
CCDC78-209ENST00000474647 RANBP2P49792 3224 aaKnown RBP17.42■□□□□ 0.38
CCDC78-209ENST00000474647 MAST2Q6P0Q8 1798 aa17.41■□□□□ 0.38
CCDC78-209ENST00000474647 CIAO1O76071 339 aa17.41■□□□□ 0.38
CCDC78-209ENST00000474647 RGS3P49796 1198 aa17.41■□□□□ 0.38
CCDC78-209ENST00000474647 FCGRTP55899 365 aa17.41■□□□□ 0.38
CCDC78-209ENST00000474647 PRKCZQ05513 592 aa17.41■□□□□ 0.38
CCDC78-209ENST00000474647 ALDH1L2Q3SY69 923 aa17.41■□□□□ 0.38
CCDC78-209ENST00000474647 GADL1Q6ZQY3 521 aa17.41■□□□□ 0.38
CCDC78-209ENST00000474647 DZIP1Q86YF9 867 aaKnown RBP17.41■□□□□ 0.38
CCDC78-209ENST00000474647 PICK1Q9NRD5 415 aa17.41■□□□□ 0.38
CCDC78-209ENST00000474647 PA2G4Q9UQ80 394 aaKnown RBP17.41■□□□□ 0.38
CCDC78-209ENST00000474647 SALL1Q9NSC2 1324 aa17.41■□□□□ 0.38
CCDC78-209ENST00000474647 CCL5P13501 91 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms