RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 OTOFQ9HC10 1997 aa10.98□□□□□ -0.65
TNFRSF9-202ENST00000474475 PPP1R12BO60237 982 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF9-202ENST00000474475 USP2O75604 605 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF9-202ENST00000474475 UBTFL1P0CB47 393 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF9-202ENST00000474475 RGS19P49795 217 aa10.98□□□□□ -0.65
TNFRSF9-202ENST00000474475 SREBF2Q12772 1141 aa10.98□□□□□ -0.65
TNFRSF9-202ENST00000474475 PUM3Q15397 648 aaKnown RBP10.98□□□□□ -0.65
TNFRSF9-202ENST00000474475 ATG9AQ7Z3C6 839 aa10.98□□□□□ -0.65
TNFRSF9-202ENST00000474475 SLC10A4Q96EP9 437 aa10.98□□□□□ -0.65
TNFRSF9-202ENST00000474475 TEPSINQ96N21 525 aa10.98□□□□□ -0.65
TNFRSF9-202ENST00000474475 KIF16BQ96L93 1317 aa10.98□□□□□ -0.65
TNFRSF9-202ENST00000474475 FRAT2O75474 233 aaPredicted RBP10.97□□□□□ -0.65
TNFRSF9-202ENST00000474475 RARSP54136 660 aaKnown RBP10.97□□□□□ -0.65
TNFRSF9-202ENST00000474475 TNFAIP1Q13829 316 aa10.97□□□□□ -0.65
TNFRSF9-202ENST00000474475 CTU1Q7Z7A3 348 aaKnown RBP10.97□□□□□ -0.65
TNFRSF9-202ENST00000474475 PDCD7Q8N8D1 485 aaKnown RBP10.97□□□□□ -0.65
TNFRSF9-202ENST00000474475 TBC1D22AQ8WUA7 517 aa10.97□□□□□ -0.65
TNFRSF9-202ENST00000474475 ZNF296Q8WUU4 475 aaPredicted RBP10.97□□□□□ -0.65
TNFRSF9-202ENST00000474475 WNK4Q96J92 1243 aa10.97□□□□□ -0.65
TNFRSF9-202ENST00000474475 CFHR5Q9BXR6 569 aa10.97□□□□□ -0.65
TNFRSF9-202ENST00000474475 API5Q9BZZ5 524 aaKnown RBP10.97□□□□□ -0.65
TNFRSF9-202ENST00000474475 R3HDMLQ9H3Y0 253 aa10.97□□□□□ -0.65
TNFRSF9-202ENST00000474475 MYH13Q9UKX3 1938 aa10.96□□□□□ -0.65
TNFRSF9-202ENST00000474475 MANSC4A6NHS7 340 aaPredicted RBP10.96□□□□□ -0.65
TNFRSF9-202ENST00000474475 UNCXA6NJT0 531 aa10.96□□□□□ -0.65
TNFRSF9-202ENST00000474475 TCP10L2B9ZVM9 353 aa10.96□□□□□ -0.65
TNFRSF9-202ENST00000474475 GPR25O00155 361 aa10.96□□□□□ -0.65
TNFRSF9-202ENST00000474475 IFIT1P09914 478 aaKnown RBP10.96□□□□□ -0.65
TNFRSF9-202ENST00000474475 ZBTB48P10074 688 aaPredicted RBP10.96□□□□□ -0.65
TNFRSF9-202ENST00000474475 GJA5P36382 358 aa10.96□□□□□ -0.65
TNFRSF9-202ENST00000474475 IREB2P48200 963 aaKnown RBP10.96□□□□□ -0.65
TNFRSF9-202ENST00000474475 CACNB3P54284 484 aa10.96□□□□□ -0.65
TNFRSF9-202ENST00000474475 HDLBPQ00341 1268 aaKnown RBP10.96□□□□□ -0.65
TNFRSF9-202ENST00000474475 NOM1Q5C9Z4 860 aaKnown RBP10.96□□□□□ -0.65
TNFRSF9-202ENST00000474475 LPIN2Q92539 896 aa10.96□□□□□ -0.65
TNFRSF9-202ENST00000474475 TEKT1Q969V4 418 aa10.96□□□□□ -0.65
TNFRSF9-202ENST00000474475 MEIS3Q99687 375 aa10.96□□□□□ -0.65
TNFRSF9-202ENST00000474475 TMEM39BQ9GZU3 492 aa10.96□□□□□ -0.65
TNFRSF9-202ENST00000474475 SIL1Q9H173 461 aa10.96□□□□□ -0.65
TNFRSF9-202ENST00000474475 LRRFIP2Q9Y608 721 aaKnown RBP10.96□□□□□ -0.65
TNFRSF9-202ENST00000474475 IGF2BP3O00425 579 aaKnown RBP eCLIP10.95□□□□□ -0.66
TNFRSF9-202ENST00000474475 CIAO1O76071 339 aa10.95□□□□□ -0.66
TNFRSF9-202ENST00000474475 SLC5A1P13866 664 aa10.95□□□□□ -0.66
TNFRSF9-202ENST00000474475 ANKRD13AQ8IZ07 590 aa10.95□□□□□ -0.66
TNFRSF9-202ENST00000474475 ZDHHC15Q96MV8 337 aa10.95□□□□□ -0.66
TNFRSF9-202ENST00000474475 MRIQ9BWK5 157 aa10.95□□□□□ -0.66
TNFRSF9-202ENST00000474475 ALDH1A1P00352 501 aa10.94□□□□□ -0.66
TNFRSF9-202ENST00000474475 TNNI2P48788 182 aa10.94□□□□□ -0.66
TNFRSF9-202ENST00000474475 INHBEP58166 350 aa10.94□□□□□ -0.66
TNFRSF9-202ENST00000474475 ATP2B3Q16720 1220 aa10.94□□□□□ -0.66
TNFRSF9-202ENST00000474475 INTS3Q68E01 1043 aaKnown RBP10.94□□□□□ -0.66
TNFRSF9-202ENST00000474475 APOBEC3HQ6NTF7 200 aaKnown RBP10.94□□□□□ -0.66
TNFRSF9-202ENST00000474475 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF9-202ENST00000474475 ARHGAP45Q92619 1136 aa10.94□□□□□ -0.66
TNFRSF9-202ENST00000474475 ELP3Q9H9T3 547 aa10.94□□□□□ -0.66
TNFRSF9-202ENST00000474475 PA2G4Q9UQ80 394 aaKnown RBP10.94□□□□□ -0.66
TNFRSF9-202ENST00000474475 SUGT1Q9Y2Z0 365 aa10.94□□□□□ -0.66
TNFRSF9-202ENST00000474475 MAST3O60307 1309 aa10.93□□□□□ -0.66
TNFRSF9-202ENST00000474475 FKTNO75072 461 aa10.93□□□□□ -0.66
TNFRSF9-202ENST00000474475 IL15P40933 162 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF9-202ENST00000474475 HHIPL2Q6UWX4 724 aa10.93□□□□□ -0.66
TNFRSF9-202ENST00000474475 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.93□□□□□ -0.66
TNFRSF9-202ENST00000474475 WDR66Q8TBY9 1149 aa10.93□□□□□ -0.66
TNFRSF9-202ENST00000474475 OPTNQ96CV9 577 aa10.93□□□□□ -0.66
TNFRSF9-202ENST00000474475 COPRSQ9NQ92 184 aa10.93□□□□□ -0.66
TNFRSF9-202ENST00000474475 CEP126Q9P2H0 1117 aa10.93□□□□□ -0.66
TNFRSF9-202ENST00000474475 HPS5Q9UPZ3 1129 aa10.93□□□□□ -0.66
TNFRSF9-202ENST00000474475 TNNQ9UQP3 1299 aa10.93□□□□□ -0.66
TNFRSF9-202ENST00000474475 TESPA1A2RU30 521 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF9-202ENST00000474475 BCAR3O75815 825 aa10.92□□□□□ -0.66
TNFRSF9-202ENST00000474475 PHKA1P46020 1223 aa10.92□□□□□ -0.66
TNFRSF9-202ENST00000474475 SOX10P56693 466 aa10.92□□□□□ -0.66
TNFRSF9-202ENST00000474475 VGLL4Q14135 290 aa10.92□□□□□ -0.66
TNFRSF9-202ENST00000474475 PKN2Q16513 984 aaKnown RBP10.92□□□□□ -0.66
TNFRSF9-202ENST00000474475 FKBP1CQ5VVH2 108 aa10.92□□□□□ -0.66
TNFRSF9-202ENST00000474475 FAM83AQ86UY5 434 aa10.92□□□□□ -0.66
TNFRSF9-202ENST00000474475 PTPN18Q99952 460 aa10.92□□□□□ -0.66
TNFRSF9-202ENST00000474475 HDAC5Q9UQL6 1122 aa10.92□□□□□ -0.66
TNFRSF9-202ENST00000474475 COLQQ9Y215 455 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF9-202ENST00000474475 BOLA1Q9Y3E2 137 aa10.92□□□□□ -0.66
TNFRSF9-202ENST00000474475 GNAI3P08754 354 aa10.91□□□□□ -0.66
TNFRSF9-202ENST00000474475 TRIM27P14373 513 aa10.91□□□□□ -0.66
TNFRSF9-202ENST00000474475 PRDX5P30044 214 aa10.91□□□□□ -0.66
TNFRSF9-202ENST00000474475 ADORA1P30542 326 aa10.91□□□□□ -0.66
TNFRSF9-202ENST00000474475 MAP3K9P80192 1104 aa10.91□□□□□ -0.66
TNFRSF9-202ENST00000474475 DIXDC1Q155Q3 683 aa10.91□□□□□ -0.66
TNFRSF9-202ENST00000474475 WDR70Q9NW82 654 aa10.91□□□□□ -0.66
TNFRSF9-202ENST00000474475 TMOD2Q9NZR1 351 aa10.91□□□□□ -0.66
TNFRSF9-202ENST00000474475 DAGLAQ9Y4D2 1042 aa10.91□□□□□ -0.66
TNFRSF9-202ENST00000474475 RPAP1Q9BWH6 1393 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF9-202ENST00000474475 SALL1Q9NSC2 1324 aa10.9□□□□□ -0.66
TNFRSF9-202ENST00000474475 SEMA3EO15041 775 aa10.9□□□□□ -0.66
TNFRSF9-202ENST00000474475 SRGAP3O43295 1099 aa10.9□□□□□ -0.66
TNFRSF9-202ENST00000474475 CRHR2Q13324 411 aa10.9□□□□□ -0.66
TNFRSF9-202ENST00000474475 MTX1Q13505 466 aa10.9□□□□□ -0.66
TNFRSF9-202ENST00000474475 CCDC102BQ68D86 513 aa10.9□□□□□ -0.66
TNFRSF9-202ENST00000474475 CDC42EP5Q6NZY7 148 aa10.9□□□□□ -0.66
TNFRSF9-202ENST00000474475 FBXO46Q6PJ61 603 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF9-202ENST00000474475 BRI3BPQ8WY22 251 aa10.9□□□□□ -0.66
TNFRSF9-202ENST00000474475 OTUD5Q96G74 571 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms