RNA–Protein interactions for RNA: ENST00000474394.5

RNF220-210, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-210ENST00000474394 HMG20BQ9P0W2 317 aa13.2□□□□□ -0.3
RNF220-210ENST00000474394 ABCF2Q9UG63 623 aa13.2□□□□□ -0.3
RNF220-210ENST00000474394 AOX1Q06278 1338 aa13.19□□□□□ -0.3
RNF220-210ENST00000474394 APBB1O00213 710 aa13.19□□□□□ -0.3
RNF220-210ENST00000474394 MCAMP43121 646 aa13.19□□□□□ -0.3
RNF220-210ENST00000474394 FXR1P51114 621 aaKnown RBP eCLIP13.19□□□□□ -0.3
RNF220-210ENST00000474394 ERICH6Q7L0X2 663 aa13.19□□□□□ -0.3
RNF220-210ENST00000474394 AACSQ86V21 672 aa13.19□□□□□ -0.3
RNF220-210ENST00000474394 DZIP1Q86YF9 867 aaKnown RBP13.19□□□□□ -0.3
RNF220-210ENST00000474394 SLF2Q8IX21 1173 aa13.19□□□□□ -0.3
RNF220-210ENST00000474394 CLASRPQ8N2M8 674 aaKnown RBP13.19□□□□□ -0.3
RNF220-210ENST00000474394 ZNF512BQ96KM6 892 aaPredicted RBP13.19□□□□□ -0.3
RNF220-210ENST00000474394 IL1RAPL2Q9NP60 686 aa13.19□□□□□ -0.3
RNF220-210ENST00000474394 DBNLQ9UJU6 430 aaKnown RBP13.19□□□□□ -0.3
RNF220-210ENST00000474394 SZT2Q5T011 3432 aa13.19□□□□□ -0.3
RNF220-210ENST00000474394 TNNI2P48788 182 aa13.18□□□□□ -0.3
RNF220-210ENST00000474394 ZNF157P51786 506 aaPredicted RBP13.18□□□□□ -0.3
RNF220-210ENST00000474394 TTLL12Q14166 644 aaPredicted RBP13.18□□□□□ -0.3
RNF220-210ENST00000474394 RASA3Q14644 834 aa13.18□□□□□ -0.3
RNF220-210ENST00000474394 DIXDC1Q155Q3 683 aa13.18□□□□□ -0.3
RNF220-210ENST00000474394 APOBEC3HQ6NTF7 200 aaKnown RBP13.18□□□□□ -0.3
RNF220-210ENST00000474394 PI16Q6UXB8 463 aa13.18□□□□□ -0.3
RNF220-210ENST00000474394 CSRNP1Q96S65 589 aa13.18□□□□□ -0.3
RNF220-210ENST00000474394 CRBNQ96SW2 442 aa13.18□□□□□ -0.3
RNF220-210ENST00000474394 TLR7Q9NYK1 1049 aaKnown RBP13.18□□□□□ -0.3
RNF220-210ENST00000474394 DAGLAQ9Y4D2 1042 aa13.18□□□□□ -0.3
RNF220-210ENST00000474394 CENPFP49454 3210 aa13.17□□□□□ -0.3
RNF220-210ENST00000474394 TCP10L2B9ZVM9 353 aa13.17□□□□□ -0.3
RNF220-210ENST00000474394 SUPT20HL1Q3ZLR7 823 aa13.17□□□□□ -0.3
RNF220-210ENST00000474394 ARMC9Q7Z3E5 817 aa13.17□□□□□ -0.3
RNF220-210ENST00000474394 PAPPA2Q9BXP8 1791 aa13.17□□□□□ -0.3
RNF220-210ENST00000474394 A0A0C4DFX4 3053 aa13.16□□□□□ -0.3
RNF220-210ENST00000474394 IFIT2P09913 472 aaKnown RBP13.16□□□□□ -0.3
RNF220-210ENST00000474394 GSTO1P78417 241 aa13.16□□□□□ -0.3
RNF220-210ENST00000474394 FKBP1CQ5VVH2 108 aa13.16□□□□□ -0.3
RNF220-210ENST00000474394 TBC1D9Q6ZT07 1266 aa13.16□□□□□ -0.3
RNF220-210ENST00000474394 REM2Q8IYK8 340 aaPredicted RBP13.16□□□□□ -0.3
RNF220-210ENST00000474394 SNRKQ9NRH2 765 aa13.16□□□□□ -0.3
RNF220-210ENST00000474394 RAI14Q9P0K7 980 aa13.16□□□□□ -0.3
RNF220-210ENST00000474394 LRP2BPQ9P2M1 347 aa13.16□□□□□ -0.3
RNF220-210ENST00000474394 GAKO14976 1311 aa13.15□□□□□ -0.3
RNF220-210ENST00000474394 PPP1R12BO60237 982 aaPredicted RBP13.15□□□□□ -0.3
RNF220-210ENST00000474394 LDHCP07864 332 aa13.15□□□□□ -0.3
RNF220-210ENST00000474394 CACNB3P54284 484 aa13.15□□□□□ -0.3
RNF220-210ENST00000474394 MECOMQ03112 1051 aa13.15□□□□□ -0.3
RNF220-210ENST00000474394 NBPF12Q5TAG4 269 aaPredicted RBP13.15□□□□□ -0.3
RNF220-210ENST00000474394 CDC42EP5Q6NZY7 148 aa13.15□□□□□ -0.3
RNF220-210ENST00000474394 FAM83AQ86UY5 434 aa13.15□□□□□ -0.3
RNF220-210ENST00000474394 FAM163AQ96GL9 167 aaPredicted RBP13.15□□□□□ -0.3
RNF220-210ENST00000474394 LRRCC1Q9C099 1032 aa13.15□□□□□ -0.3
RNF220-210ENST00000474394 BCL11AQ9H165 835 aa13.15□□□□□ -0.3
RNF220-210ENST00000474394 USP40Q9NVE5 1235 aa13.15□□□□□ -0.3
RNF220-210ENST00000474394 PCDHB15Q9Y5E8 787 aa13.15□□□□□ -0.3
RNF220-210ENST00000474394 MYH2Q9UKX2 1941 aa13.15□□□□□ -0.3
RNF220-210ENST00000474394 UBE2Q2LH0YL09 131 aa13.14□□□□□ -0.31
RNF220-210ENST00000474394 IGSF3O75054 1194 aa13.14□□□□□ -0.31
RNF220-210ENST00000474394 ZAP70P43403 619 aa13.14□□□□□ -0.31
RNF220-210ENST00000474394 AAMPQ13685 434 aa13.14□□□□□ -0.31
RNF220-210ENST00000474394 PRKG1Q13976 671 aa13.14□□□□□ -0.31
RNF220-210ENST00000474394 MOB2Q70IA6 237 aa13.14□□□□□ -0.31
RNF220-210ENST00000474394 NSUN4Q96CB9 384 aaKnown RBP13.14□□□□□ -0.31
RNF220-210ENST00000474394 DCTPP1Q9H773 170 aa13.14□□□□□ -0.31
RNF220-210ENST00000474394 ANGEL1Q9UNK9 670 aaKnown RBP13.14□□□□□ -0.31
RNF220-210ENST00000474394 MROH7-TTC4A0A0A0MT08 1334 aa13.13□□□□□ -0.31
RNF220-210ENST00000474394 DLL1O00548 723 aa13.13□□□□□ -0.31
RNF220-210ENST00000474394 CYP2E1P05181 493 aaPredicted RBP13.13□□□□□ -0.31
RNF220-210ENST00000474394 SLC10A3P09131 477 aa13.13□□□□□ -0.31
RNF220-210ENST00000474394 BTDP43251 543 aa13.13□□□□□ -0.31
RNF220-210ENST00000474394 HOOK2Q96ED9 719 aa13.13□□□□□ -0.31
RNF220-210ENST00000474394 TEPSINQ96N21 525 aa13.13□□□□□ -0.31
RNF220-210ENST00000474394 TMEM39BQ9GZU3 492 aa13.13□□□□□ -0.31
RNF220-210ENST00000474394 SUPT16HQ9Y5B9 1047 aaKnown RBP13.13□□□□□ -0.31
RNF220-210ENST00000474394 BRCA2P51587 3418 aa13.13□□□□□ -0.31
RNF220-210ENST00000474394 GPR75-ASB3A0A0A6YYF3 556 aa13.12□□□□□ -0.31
RNF220-210ENST00000474394 IREB2P48200 963 aaKnown RBP13.12□□□□□ -0.31
RNF220-210ENST00000474394 MAP3K11Q16584 847 aa13.12□□□□□ -0.31
RNF220-210ENST00000474394 NAA16Q6N069 864 aaPredicted RBP13.12□□□□□ -0.31
RNF220-210ENST00000474394 FBXO46Q6PJ61 603 aaPredicted RBP13.12□□□□□ -0.31
RNF220-210ENST00000474394 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.12□□□□□ -0.31
RNF220-210ENST00000474394 ZNF296Q8WUU4 475 aaPredicted RBP13.12□□□□□ -0.31
RNF220-210ENST00000474394 NOL10Q9BSC4 688 aaKnown RBP13.12□□□□□ -0.31
RNF220-210ENST00000474394 SSC5DA1L4H1 1573 aa13.11□□□□□ -0.31
RNF220-210ENST00000474394 RPAP1Q9BWH6 1393 aaPredicted RBP13.11□□□□□ -0.31
RNF220-210ENST00000474394 UNCXA6NJT0 531 aa13.11□□□□□ -0.31
RNF220-210ENST00000474394 SMARCA5O60264 1052 aaPredicted RBP13.11□□□□□ -0.31
RNF220-210ENST00000474394 MAP4K4O95819 1239 aaPredicted RBP13.11□□□□□ -0.31
RNF220-210ENST00000474394 TCP10Q12799 353 aa13.11□□□□□ -0.31
RNF220-210ENST00000474394 TTF1Q15361 905 aaPredicted RBP13.11□□□□□ -0.31
RNF220-210ENST00000474394 LDLRAD1Q5T700 205 aa13.11□□□□□ -0.31
RNF220-210ENST00000474394 RASAL3Q86YV0 1011 aa13.11□□□□□ -0.31
RNF220-210ENST00000474394 ZNF384Q8TF68 577 aa13.11□□□□□ -0.31
RNF220-210ENST00000474394 FAM151AQ8WW52 585 aa13.11□□□□□ -0.31
RNF220-210ENST00000474394 IDI2Q9BXS1 227 aa13.11□□□□□ -0.31
RNF220-210ENST00000474394 PIH1D3Q9NQM4 214 aaKnown RBP13.11□□□□□ -0.31
RNF220-210ENST00000474394 FZD1Q9UP38 647 aa13.11□□□□□ -0.31
RNF220-210ENST00000474394 HTTP42858 3142 aa13.11□□□□□ -0.31
RNF220-210ENST00000474394 ENTPD3O75355 529 aa13.1□□□□□ -0.31
RNF220-210ENST00000474394 USP2O75604 605 aaPredicted RBP13.1□□□□□ -0.31
RNF220-210ENST00000474394 IDH1O75874 414 aaKnown RBP13.1□□□□□ -0.31
RNF220-210ENST00000474394 BAG3O95817 575 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms