RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 HSP90AB4PQ58FF6 505 aa18.17■□□□□ 0.5
SSR4-208ENST00000471880 APOBEC3HQ6NTF7 200 aaKnown RBP18.17■□□□□ 0.5
SSR4-208ENST00000471880 TBC1D9Q6ZT07 1266 aa18.17■□□□□ 0.5
SSR4-208ENST00000471880 SLF2Q8IX21 1173 aa18.17■□□□□ 0.5
SSR4-208ENST00000471880 RPAP2Q8IXW5 612 aaPredicted RBP18.17■□□□□ 0.5
SSR4-208ENST00000471880 GPR108Q9NPR9 543 aa18.17■□□□□ 0.5
SSR4-208ENST00000471880 ZBTB40Q9NUA8 1239 aa18.17■□□□□ 0.5
SSR4-208ENST00000471880 USP40Q9NVE5 1235 aa18.17■□□□□ 0.5
SSR4-208ENST00000471880 LRP2BPQ9P2M1 347 aa18.17■□□□□ 0.5
SSR4-208ENST00000471880 AK9Q5TCS8 1911 aa18.16■□□□□ 0.5
SSR4-208ENST00000471880 AACSQ86V21 672 aa18.16■□□□□ 0.5
SSR4-208ENST00000471880 SLC10A4Q96EP9 437 aa18.16■□□□□ 0.5
SSR4-208ENST00000471880 MRIQ9BWK5 157 aa18.16■□□□□ 0.5
SSR4-208ENST00000471880 IL1RAPL2Q9NP60 686 aa18.16■□□□□ 0.5
SSR4-208ENST00000471880 PRDM10Q9NQV6 1147 aa18.16■□□□□ 0.5
SSR4-208ENST00000471880 ARID4AP29374 1257 aaPredicted RBP18.15■□□□□ 0.5
SSR4-208ENST00000471880 MCAMP43121 646 aa18.15■□□□□ 0.5
SSR4-208ENST00000471880 CDC42EP5Q6NZY7 148 aa18.15■□□□□ 0.5
SSR4-208ENST00000471880 TNS4Q8IZW8 715 aa18.15■□□□□ 0.5
SSR4-208ENST00000471880 TLR7Q9NYK1 1049 aaKnown RBP18.15■□□□□ 0.5
SSR4-208ENST00000471880 MECOMQ03112 1051 aa18.14■□□□□ 0.49
SSR4-208ENST00000471880 EAF2Q96CJ1 260 aaPredicted RBP18.14■□□□□ 0.49
SSR4-208ENST00000471880 CLMNQ96JQ2 1002 aa18.14■□□□□ 0.49
SSR4-208ENST00000471880 TEPSINQ96N21 525 aa18.14■□□□□ 0.49
SSR4-208ENST00000471880 PDS5AQ29RF7 1337 aaKnown RBP18.14■□□□□ 0.49
SSR4-208ENST00000471880 CA12O43570 354 aa18.13■□□□□ 0.49
SSR4-208ENST00000471880 BTDP43251 543 aa18.13■□□□□ 0.49
SSR4-208ENST00000471880 GSTO1P78417 241 aa18.13■□□□□ 0.49
SSR4-208ENST00000471880 LDLRAD1Q5T700 205 aa18.13■□□□□ 0.49
SSR4-208ENST00000471880 CSRNP1Q96S65 589 aa18.13■□□□□ 0.49
SSR4-208ENST00000471880 NOL10Q9BSC4 688 aaKnown RBP18.13■□□□□ 0.49
SSR4-208ENST00000471880 ELP3Q9H9T3 547 aa18.13■□□□□ 0.49
SSR4-208ENST00000471880 DBNLQ9UJU6 430 aaKnown RBP18.13■□□□□ 0.49
SSR4-208ENST00000471880 USP2O75604 605 aaPredicted RBP18.12■□□□□ 0.49
SSR4-208ENST00000471880 TRPA1O75762 1119 aa18.12■□□□□ 0.49
SSR4-208ENST00000471880 RRP1P56182 461 aaKnown RBP18.12■□□□□ 0.49
SSR4-208ENST00000471880 PICALMQ13492 652 aa18.12■□□□□ 0.49
SSR4-208ENST00000471880 FAM83AQ86UY5 434 aa18.12■□□□□ 0.49
SSR4-208ENST00000471880 ZSCAN29Q8IWY8 852 aaPredicted RBP18.12■□□□□ 0.49
SSR4-208ENST00000471880 ANKRD13AQ8IZ07 590 aa18.12■□□□□ 0.49
SSR4-208ENST00000471880 RHPN1Q8TCX5 695 aa18.12■□□□□ 0.49
SSR4-208ENST00000471880 HOOK2Q96ED9 719 aa18.12■□□□□ 0.49
SSR4-208ENST00000471880 LDHCP07864 332 aa18.11■□□□□ 0.49
SSR4-208ENST00000471880 IFIT2P09913 472 aaKnown RBP18.11■□□□□ 0.49
SSR4-208ENST00000471880 NFIAQ12857 509 aa18.11■□□□□ 0.49
SSR4-208ENST00000471880 SIRT2Q8IXJ6 389 aa18.11■□□□□ 0.49
SSR4-208ENST00000471880 CLASRPQ8N2M8 674 aaKnown RBP18.11■□□□□ 0.49
SSR4-208ENST00000471880 KIF1BPQ96EK5 621 aa18.11■□□□□ 0.49
SSR4-208ENST00000471880 CSADQ9Y600 493 aa18.11■□□□□ 0.49
SSR4-208ENST00000471880 MROH7-TTC4A0A0A0MT08 1334 aa18.11■□□□□ 0.49
SSR4-208ENST00000471880 CDK5RAP2Q96SN8 1893 aa18.1■□□□□ 0.49
SSR4-208ENST00000471880 ZAP70P43403 619 aa18.1■□□□□ 0.49
SSR4-208ENST00000471880 FKBP1CQ5VVH2 108 aa18.1■□□□□ 0.49
SSR4-208ENST00000471880 DCAF15Q66K64 600 aa18.1■□□□□ 0.49
SSR4-208ENST00000471880 NAA16Q6N069 864 aaPredicted RBP18.1■□□□□ 0.49
SSR4-208ENST00000471880 MIGA2Q7L4E1 593 aa18.1■□□□□ 0.49
SSR4-208ENST00000471880 FAM151AQ8WW52 585 aa18.1■□□□□ 0.49
SSR4-208ENST00000471880 DOCK2Q92608 1830 aa18.09■□□□□ 0.49
SSR4-208ENST00000471880 GAKO14976 1311 aa18.09■□□□□ 0.49
SSR4-208ENST00000471880 CAPN15O75808 1086 aa18.09■□□□□ 0.49
SSR4-208ENST00000471880 RGS3P49796 1198 aa18.09■□□□□ 0.49
SSR4-208ENST00000471880 SREBF2Q12772 1141 aa18.09■□□□□ 0.49
SSR4-208ENST00000471880 MAP3K11Q16584 847 aa18.09■□□□□ 0.49
SSR4-208ENST00000471880 SPRYD7Q5W111 196 aa18.09■□□□□ 0.49
SSR4-208ENST00000471880 REM2Q8IYK8 340 aaPredicted RBP18.09■□□□□ 0.49
SSR4-208ENST00000471880 WNK4Q96J92 1243 aa18.09■□□□□ 0.49
SSR4-208ENST00000471880 WRNIP1Q96S55 665 aa18.09■□□□□ 0.49
SSR4-208ENST00000471880 RNF186Q9NXI6 227 aa18.09■□□□□ 0.49
SSR4-208ENST00000471880 NDUFB9Q9Y6M9 179 aa18.09■□□□□ 0.49
SSR4-208ENST00000471880 ZBTB22O15209 634 aa18.08■□□□□ 0.48
SSR4-208ENST00000471880 RAB11FIP3O75154 756 aa18.08■□□□□ 0.48
SSR4-208ENST00000471880 IDH1O75874 414 aaKnown RBP18.08■□□□□ 0.48
SSR4-208ENST00000471880 MAP3K9P80192 1104 aa18.08■□□□□ 0.48
SSR4-208ENST00000471880 ZNF384Q8TF68 577 aa18.08■□□□□ 0.48
SSR4-208ENST00000471880 NSUN4Q96CB9 384 aaKnown RBP18.08■□□□□ 0.48
SSR4-208ENST00000471880 FAM198AQ9UFP1 575 aa18.08■□□□□ 0.48
SSR4-208ENST00000471880 CYP2E1P05181 493 aaPredicted RBP18.07■□□□□ 0.48
SSR4-208ENST00000471880 GJA5P36382 358 aa18.07■□□□□ 0.48
SSR4-208ENST00000471880 VGLL4Q14135 290 aa18.07■□□□□ 0.48
SSR4-208ENST00000471880 OPTNQ96CV9 577 aa18.07■□□□□ 0.48
SSR4-208ENST00000471880 ZNF341Q9BYN7 854 aa18.07■□□□□ 0.48
SSR4-208ENST00000471880 MAST2Q6P0Q8 1798 aa18.07■□□□□ 0.48
SSR4-208ENST00000471880 MANSC4A6NHS7 340 aaPredicted RBP18.06■□□□□ 0.48
SSR4-208ENST00000471880 ZFPM1Q8IX07 1006 aa18.06■□□□□ 0.48
SSR4-208ENST00000471880 TEX11Q8IYF3 940 aa18.06■□□□□ 0.48
SSR4-208ENST00000471880 ZKSCAN4Q969J2 545 aaPredicted RBP18.06■□□□□ 0.48
SSR4-208ENST00000471880 OTUD5Q96G74 571 aa18.06■□□□□ 0.48
SSR4-208ENST00000471880 DNAJC2Q99543 621 aaKnown RBP18.06■□□□□ 0.48
SSR4-208ENST00000471880 PIH1D3Q9NQM4 214 aaKnown RBP18.06■□□□□ 0.48
SSR4-208ENST00000471880 GPR75-ASB3A0A0A6YYF3 556 aa18.05■□□□□ 0.48
SSR4-208ENST00000471880 BAG3O95817 575 aa18.05■□□□□ 0.48
SSR4-208ENST00000471880 ZBTB48P10074 688 aaPredicted RBP18.05■□□□□ 0.48
SSR4-208ENST00000471880 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.05■□□□□ 0.48
SSR4-208ENST00000471880 CNKSR2Q8WXI2 1034 aa18.05■□□□□ 0.48
SSR4-208ENST00000471880 FAM163AQ96GL9 167 aaPredicted RBP18.05■□□□□ 0.48
SSR4-208ENST00000471880 ZNF512BQ96KM6 892 aaPredicted RBP18.05■□□□□ 0.48
SSR4-208ENST00000471880 CRBNQ96SW2 442 aa18.05■□□□□ 0.48
SSR4-208ENST00000471880 LRRCC1Q9C099 1032 aa18.05■□□□□ 0.48
SSR4-208ENST00000471880 SAGE1Q9NXZ1 904 aa18.05■□□□□ 0.48
SSR4-208ENST00000471880 AATFQ9NY61 560 aaKnown RBP eCLIP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms