RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 RBM5P52756 815 aaKnown RBP eCLIP11.72□□□□□ -0.53
GGPS1-204ENST00000471812 ATP8B2P98198 1209 aa11.72□□□□□ -0.53
GGPS1-204ENST00000471812 RASGRF1Q13972 1273 aa11.72□□□□□ -0.53
GGPS1-204ENST00000471812 NBPF12Q5TAG4 269 aaPredicted RBP11.72□□□□□ -0.53
GGPS1-204ENST00000471812 CCDC102BQ68D86 513 aa11.72□□□□□ -0.53
GGPS1-204ENST00000471812 CEP85Q6P2H3 762 aa11.72□□□□□ -0.53
GGPS1-204ENST00000471812 RASAL3Q86YV0 1011 aa11.72□□□□□ -0.53
GGPS1-204ENST00000471812 SIRT2Q8IXJ6 389 aa11.72□□□□□ -0.53
GGPS1-204ENST00000471812 SSH3Q8TE77 659 aa11.72□□□□□ -0.53
GGPS1-204ENST00000471812 ZNF384Q8TF68 577 aa11.72□□□□□ -0.53
GGPS1-204ENST00000471812 XAGE2Q96GT9 111 aa11.72□□□□□ -0.53
GGPS1-204ENST00000471812 MS4A4AQ96JQ5 239 aa11.72□□□□□ -0.53
GGPS1-204ENST00000471812 YTHDC1Q96MU7 727 aaKnown RBP11.72□□□□□ -0.53
GGPS1-204ENST00000471812 TLR7Q9NYK1 1049 aaKnown RBP11.72□□□□□ -0.53
GGPS1-204ENST00000471812 ZNF70Q9UC06 446 aaPredicted RBP11.72□□□□□ -0.53
GGPS1-204ENST00000471812 FRAT2O75474 233 aaPredicted RBP11.71□□□□□ -0.53
GGPS1-204ENST00000471812 SLURP2P0DP57 97 aa11.71□□□□□ -0.53
GGPS1-204ENST00000471812 HSPA8P11142 646 aaKnown RBP11.71□□□□□ -0.53
GGPS1-204ENST00000471812 MKRN3Q13064 507 aaKnown RBP11.71□□□□□ -0.53
GGPS1-204ENST00000471812 CAVIN4Q5BKX8 364 aa11.71□□□□□ -0.53
GGPS1-204ENST00000471812 APOBEC3HQ6NTF7 200 aaKnown RBP11.71□□□□□ -0.53
GGPS1-204ENST00000471812 RGMBQ6NW40 437 aa11.71□□□□□ -0.53
GGPS1-204ENST00000471812 CLMNQ96JQ2 1002 aa11.71□□□□□ -0.53
GGPS1-204ENST00000471812 DEFB129Q9H1M3 183 aa11.71□□□□□ -0.53
GGPS1-204ENST00000471812 AK9Q5TCS8 1911 aa11.7□□□□□ -0.54
GGPS1-204ENST00000471812 TCP10L2B9ZVM9 353 aa11.7□□□□□ -0.54
GGPS1-204ENST00000471812 LBX1P52954 281 aa11.7□□□□□ -0.54
GGPS1-204ENST00000471812 RASA3Q14644 834 aa11.7□□□□□ -0.54
GGPS1-204ENST00000471812 C2orf69Q8N8R5 385 aa11.7□□□□□ -0.54
GGPS1-204ENST00000471812 TEPSINQ96N21 525 aa11.7□□□□□ -0.54
GGPS1-204ENST00000471812 TMEM39BQ9GZU3 492 aa11.7□□□□□ -0.54
GGPS1-204ENST00000471812 CDK5RAP2Q96SN8 1893 aa11.7□□□□□ -0.54
GGPS1-204ENST00000471812 SLC10A3P09131 477 aa11.69□□□□□ -0.54
GGPS1-204ENST00000471812 TIE1P35590 1138 aa11.69□□□□□ -0.54
GGPS1-204ENST00000471812 ZNF157P51786 506 aaPredicted RBP11.69□□□□□ -0.54
GGPS1-204ENST00000471812 KIF23Q02241 960 aaPredicted RBP11.69□□□□□ -0.54
GGPS1-204ENST00000471812 MVPQ14764 893 aaKnown RBP11.69□□□□□ -0.54
GGPS1-204ENST00000471812 TBC1D9Q6ZT07 1266 aa11.69□□□□□ -0.54
GGPS1-204ENST00000471812 APOBEC3FQ8IUX4 373 aaKnown RBP11.69□□□□□ -0.54
GGPS1-204ENST00000471812 HHIPL1Q96JK4 782 aa11.69□□□□□ -0.54
GGPS1-204ENST00000471812 NEUROD6Q96NK8 337 aa11.69□□□□□ -0.54
GGPS1-204ENST00000471812 DBNDD2Q9BQY9 259 aa11.69□□□□□ -0.54
GGPS1-204ENST00000471812 SERPINA10Q9UK55 444 aa11.69□□□□□ -0.54
GGPS1-204ENST00000471812 EXOC6BQ9Y2D4 811 aa11.69□□□□□ -0.54
GGPS1-204ENST00000471812 DAGLAQ9Y4D2 1042 aa11.69□□□□□ -0.54
GGPS1-204ENST00000471812 NDUFB9Q9Y6M9 179 aa11.69□□□□□ -0.54
GGPS1-204ENST00000471812 SURF6O75683 361 aaKnown RBP11.68□□□□□ -0.54
GGPS1-204ENST00000471812 GJA5P36382 358 aa11.68□□□□□ -0.54
GGPS1-204ENST00000471812 ECE1P42892 770 aa11.68□□□□□ -0.54
GGPS1-204ENST00000471812 MCAMP43121 646 aa11.68□□□□□ -0.54
GGPS1-204ENST00000471812 NFIAQ12857 509 aa11.68□□□□□ -0.54
GGPS1-204ENST00000471812 TTLL12Q14166 644 aaPredicted RBP11.68□□□□□ -0.54
GGPS1-204ENST00000471812 MAMSTRQ6ZN01 415 aa11.68□□□□□ -0.54
GGPS1-204ENST00000471812 ZFPM1Q8IX07 1006 aa11.68□□□□□ -0.54
GGPS1-204ENST00000471812 KCNV2Q8TDN2 545 aa11.68□□□□□ -0.54
GGPS1-204ENST00000471812 TMEM106CQ9BVX2 250 aa11.68□□□□□ -0.54
GGPS1-204ENST00000471812 SNRKQ9NRH2 765 aa11.68□□□□□ -0.54
GGPS1-204ENST00000471812 HMG20BQ9P0W2 317 aa11.68□□□□□ -0.54
GGPS1-204ENST00000471812 ANGEL1Q9UNK9 670 aaKnown RBP11.68□□□□□ -0.54
GGPS1-204ENST00000471812 LAMB1P07942 1786 aa11.67□□□□□ -0.54
GGPS1-204ENST00000471812 USP2O75604 605 aaPredicted RBP11.67□□□□□ -0.54
GGPS1-204ENST00000471812 G3BP1Q13283 466 aaKnown RBP eCLIP11.67□□□□□ -0.54
GGPS1-204ENST00000471812 TNNI3KQ59H18 835 aa11.67□□□□□ -0.54
GGPS1-204ENST00000471812 TEKT1Q969V4 418 aa11.67□□□□□ -0.54
GGPS1-204ENST00000471812 EAF2Q96CJ1 260 aaPredicted RBP11.67□□□□□ -0.54
GGPS1-204ENST00000471812 ZDHHC15Q96MV8 337 aa11.67□□□□□ -0.54
GGPS1-204ENST00000471812 CCDC8Q9H0W5 538 aaPredicted RBP11.67□□□□□ -0.54
GGPS1-204ENST00000471812 PLSCR2Q9NRY7 297 aa11.67□□□□□ -0.54
GGPS1-204ENST00000471812 ZBTB40Q9NUA8 1239 aa11.67□□□□□ -0.54
GGPS1-204ENST00000471812 NOP58Q9Y2X3 529 aaKnown RBP11.67□□□□□ -0.54
GGPS1-204ENST00000471812 FPGT-TNNI3KV9GXZ4 949 aa11.67□□□□□ -0.54
GGPS1-204ENST00000471812 SIPA1L1O43166 1804 aa11.66□□□□□ -0.54
GGPS1-204ENST00000471812 DOCK2Q92608 1830 aa11.66□□□□□ -0.54
GGPS1-204ENST00000471812 APBB1O00213 710 aa11.66□□□□□ -0.54
GGPS1-204ENST00000471812 LDLRAD1Q5T700 205 aa11.66□□□□□ -0.54
GGPS1-204ENST00000471812 CDC42EP5Q6NZY7 148 aa11.66□□□□□ -0.54
GGPS1-204ENST00000471812 WDR66Q8TBY9 1149 aa11.66□□□□□ -0.54
GGPS1-204ENST00000471812 TBC1D22AQ8WUA7 517 aa11.66□□□□□ -0.54
GGPS1-204ENST00000471812 CSRNP1Q96S65 589 aa11.66□□□□□ -0.54
GGPS1-204ENST00000471812 R3HDMLQ9H3Y0 253 aa11.66□□□□□ -0.54
GGPS1-204ENST00000471812 FAM198AQ9UFP1 575 aa11.66□□□□□ -0.54
GGPS1-204ENST00000471812 DBNLQ9UJU6 430 aaKnown RBP11.66□□□□□ -0.54
GGPS1-204ENST00000471812 MAST2Q6P0Q8 1798 aa11.65□□□□□ -0.54
GGPS1-204ENST00000471812 ARID4AP29374 1257 aaPredicted RBP11.65□□□□□ -0.54
GGPS1-204ENST00000471812 MAP2K2P36507 400 aa11.65□□□□□ -0.54
GGPS1-204ENST00000471812 BCL11AQ9H165 835 aa11.65□□□□□ -0.54
GGPS1-204ENST00000471812 IL1RAPL2Q9NP60 686 aa11.65□□□□□ -0.54
GGPS1-204ENST00000471812 ABCF2Q9UG63 623 aa11.65□□□□□ -0.54
GGPS1-204ENST00000471812 DENND2AQ9ULE3 1009 aa11.65□□□□□ -0.54
GGPS1-204ENST00000471812 HDAC5Q9UQL6 1122 aa11.65□□□□□ -0.54
GGPS1-204ENST00000471812 RFX7Q2KHR2 1363 aa11.65□□□□□ -0.55
GGPS1-204ENST00000471812 SALL1Q9NSC2 1324 aa11.64□□□□□ -0.55
GGPS1-204ENST00000471812 TTLL13PA6NNM8 815 aa11.64□□□□□ -0.55
GGPS1-204ENST00000471812 LDHBP07195 334 aaKnown RBP11.64□□□□□ -0.55
GGPS1-204ENST00000471812 CTCFP49711 727 aaPredicted RBP11.64□□□□□ -0.55
GGPS1-204ENST00000471812 MMP14P50281 582 aa11.64□□□□□ -0.55
GGPS1-204ENST00000471812 HDLBPQ00341 1268 aaKnown RBP11.64□□□□□ -0.55
GGPS1-204ENST00000471812 MAP2K1Q02750 393 aaPredicted RBP11.64□□□□□ -0.55
GGPS1-204ENST00000471812 MECOMQ03112 1051 aa11.64□□□□□ -0.55
GGPS1-204ENST00000471812 TCP10Q12799 353 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms