RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 CACNB3P54284 484 aa16.66■□□□□ 0.26
HMGN1-211ENST00000471260 ATP8B2P98198 1209 aa16.66■□□□□ 0.26
HMGN1-211ENST00000471260 RASGRF1Q13972 1273 aa16.66■□□□□ 0.26
HMGN1-211ENST00000471260 DCAF15Q66K64 600 aa16.66■□□□□ 0.26
HMGN1-211ENST00000471260 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.66■□□□□ 0.26
HMGN1-211ENST00000471260 ZNF296Q8WUU4 475 aaPredicted RBP16.66■□□□□ 0.26
HMGN1-211ENST00000471260 CSADQ9Y600 493 aa16.66■□□□□ 0.26
HMGN1-211ENST00000471260 LAMB1P07942 1786 aa16.66■□□□□ 0.26
HMGN1-211ENST00000471260 CCDC85CA6NKD9 419 aa16.65■□□□□ 0.26
HMGN1-211ENST00000471260 ZBTB7BO15156 539 aaPredicted RBP16.65■□□□□ 0.26
HMGN1-211ENST00000471260 VGLL4Q14135 290 aa16.65■□□□□ 0.26
HMGN1-211ENST00000471260 POLA2Q14181 598 aa16.65■□□□□ 0.26
HMGN1-211ENST00000471260 DIXDC1Q155Q3 683 aa16.65■□□□□ 0.26
HMGN1-211ENST00000471260 CDC42EP5Q6NZY7 148 aa16.65■□□□□ 0.26
HMGN1-211ENST00000471260 CDAN1Q8IWY9 1227 aa16.65■□□□□ 0.26
HMGN1-211ENST00000471260 SSH3Q8TE77 659 aa16.65■□□□□ 0.26
HMGN1-211ENST00000471260 OPTNQ96CV9 577 aa16.65■□□□□ 0.26
HMGN1-211ENST00000471260 FAM163AQ96GL9 167 aaPredicted RBP16.65■□□□□ 0.26
HMGN1-211ENST00000471260 NEUROD6Q96NK8 337 aa16.65■□□□□ 0.26
HMGN1-211ENST00000471260 GPR108Q9NPR9 543 aa16.65■□□□□ 0.26
HMGN1-211ENST00000471260 GJA5P36382 358 aa16.64■□□□□ 0.25
HMGN1-211ENST00000471260 GORABQ5T7V8 394 aa16.64■□□□□ 0.25
HMGN1-211ENST00000471260 ITPRIPQ8IWB1 547 aa16.64■□□□□ 0.25
HMGN1-211ENST00000471260 ELP3Q9H9T3 547 aa16.64■□□□□ 0.25
HMGN1-211ENST00000471260 GAKO14976 1311 aa16.64■□□□□ 0.25
HMGN1-211ENST00000471260 FKTNO75072 461 aa16.63■□□□□ 0.25
HMGN1-211ENST00000471260 MS4A1P11836 297 aa16.63■□□□□ 0.25
HMGN1-211ENST00000471260 RGS19P49795 217 aa16.63■□□□□ 0.25
HMGN1-211ENST00000471260 DZIP1Q86YF9 867 aaKnown RBP16.63■□□□□ 0.25
HMGN1-211ENST00000471260 ZNF341Q9BYN7 854 aa16.63■□□□□ 0.25
HMGN1-211ENST00000471260 USP40Q9NVE5 1235 aa16.63■□□□□ 0.25
HMGN1-211ENST00000471260 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.63■□□□□ 0.25
HMGN1-211ENST00000471260 ABCF2Q9UG63 623 aa16.63■□□□□ 0.25
HMGN1-211ENST00000471260 SPDYE5A6NIY4 337 aa16.62■□□□□ 0.25
HMGN1-211ENST00000471260 IGF2BP3O00425 579 aaKnown RBP eCLIP16.62■□□□□ 0.25
HMGN1-211ENST00000471260 UQCRFS1P1P0C7P4 283 aa16.62■□□□□ 0.25
HMGN1-211ENST00000471260 ARID4AP29374 1257 aaPredicted RBP16.62■□□□□ 0.25
HMGN1-211ENST00000471260 GTF2A2P52657 109 aa16.62■□□□□ 0.25
HMGN1-211ENST00000471260 ERICH6BQ5W0A0 696 aa16.62■□□□□ 0.25
HMGN1-211ENST00000471260 ERICH6Q7L0X2 663 aa16.62■□□□□ 0.25
HMGN1-211ENST00000471260 ERO1BQ86YB8 467 aa16.62■□□□□ 0.25
HMGN1-211ENST00000471260 MS4A4AQ96JQ5 239 aa16.62■□□□□ 0.25
HMGN1-211ENST00000471260 WRNIP1Q96S55 665 aa16.62■□□□□ 0.25
HMGN1-211ENST00000471260 IDI2Q9BXS1 227 aa16.62■□□□□ 0.25
HMGN1-211ENST00000471260 NOP58Q9Y2X3 529 aaKnown RBP16.62■□□□□ 0.25
HMGN1-211ENST00000471260 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.62■□□□□ 0.25
HMGN1-211ENST00000471260 OTOFQ9HC10 1997 aa16.62■□□□□ 0.25
HMGN1-211ENST00000471260 IGSF3O75054 1194 aa16.61■□□□□ 0.25
HMGN1-211ENST00000471260 ENTPD3O75355 529 aa16.61■□□□□ 0.25
HMGN1-211ENST00000471260 MAP4K4O95819 1239 aaPredicted RBP16.61■□□□□ 0.25
HMGN1-211ENST00000471260 RLBP1P12271 317 aa16.61■□□□□ 0.25
HMGN1-211ENST00000471260 SPATA5Q8NB90 893 aa16.61■□□□□ 0.25
HMGN1-211ENST00000471260 HMG20BQ9P0W2 317 aa16.61■□□□□ 0.25
HMGN1-211ENST00000471260 SURF6O75683 361 aaKnown RBP16.6■□□□□ 0.25
HMGN1-211ENST00000471260 GSTO1P78417 241 aa16.6■□□□□ 0.25
HMGN1-211ENST00000471260 TCP10Q12799 353 aa16.6■□□□□ 0.25
HMGN1-211ENST00000471260 NFIAQ12857 509 aa16.6■□□□□ 0.25
HMGN1-211ENST00000471260 OS9Q13438 667 aaPredicted RBP16.6■□□□□ 0.25
HMGN1-211ENST00000471260 PTPN18Q99952 460 aa16.6■□□□□ 0.25
HMGN1-211ENST00000471260 FAM198AQ9UFP1 575 aa16.6■□□□□ 0.25
HMGN1-211ENST00000471260 ZNF112Q9UJU3 913 aa16.6■□□□□ 0.25
HMGN1-211ENST00000471260 SNCAIPQ9Y6H5 919 aa16.6■□□□□ 0.25
HMGN1-211ENST00000471260 MYH2Q9UKX2 1941 aa16.6■□□□□ 0.25
HMGN1-211ENST00000471260 GPR75-ASB3A0A0A6YYF3 556 aa16.59■□□□□ 0.25
HMGN1-211ENST00000471260 LDHCP07864 332 aa16.59■□□□□ 0.25
HMGN1-211ENST00000471260 MECOMQ03112 1051 aa16.59■□□□□ 0.25
HMGN1-211ENST00000471260 PPATQ06203 517 aa16.59■□□□□ 0.25
HMGN1-211ENST00000471260 TNNI3KQ59H18 835 aa16.59■□□□□ 0.25
HMGN1-211ENST00000471260 CCDC158Q5M9N0 1113 aa16.59■□□□□ 0.25
HMGN1-211ENST00000471260 OTUD5Q96G74 571 aa16.59■□□□□ 0.25
HMGN1-211ENST00000471260 ZNF512BQ96KM6 892 aaPredicted RBP16.59■□□□□ 0.25
HMGN1-211ENST00000471260 R3HDMLQ9H3Y0 253 aa16.59■□□□□ 0.25
HMGN1-211ENST00000471260 ZCCHC17Q9NP64 241 aaKnown RBP16.59■□□□□ 0.25
HMGN1-211ENST00000471260 FPGT-TNNI3KV9GXZ4 949 aa16.59■□□□□ 0.25
HMGN1-211ENST00000471260 MROH7-TTC4A0A0A0MT08 1334 aa16.59■□□□□ 0.25
HMGN1-211ENST00000471260 CCL15-CCL14A0A0B4J2E2 113 aa16.58■□□□□ 0.24
HMGN1-211ENST00000471260 NPM3O75607 178 aaKnown RBP16.58■□□□□ 0.24
HMGN1-211ENST00000471260 WDHD1O75717 1129 aaPredicted RBP16.58■□□□□ 0.24
HMGN1-211ENST00000471260 CETPP11597 493 aa16.58■□□□□ 0.24
HMGN1-211ENST00000471260 PPIL2Q13356 520 aa16.58■□□□□ 0.24
HMGN1-211ENST00000471260 CCL15Q16663 113 aa16.58■□□□□ 0.24
HMGN1-211ENST00000471260 MIGA2Q7L4E1 593 aa16.58■□□□□ 0.24
HMGN1-211ENST00000471260 CNKSR2Q8WXI2 1034 aa16.58■□□□□ 0.24
HMGN1-211ENST00000471260 ZKSCAN4Q969J2 545 aaPredicted RBP16.58■□□□□ 0.24
HMGN1-211ENST00000471260 C1orf115Q9H7X2 142 aa16.58■□□□□ 0.24
HMGN1-211ENST00000471260 MCAMP43121 646 aa16.57■□□□□ 0.24
HMGN1-211ENST00000471260 BTDP43251 543 aa16.57■□□□□ 0.24
HMGN1-211ENST00000471260 RGS3P49796 1198 aa16.57■□□□□ 0.24
HMGN1-211ENST00000471260 CRHR2Q13324 411 aa16.57■□□□□ 0.24
HMGN1-211ENST00000471260 SNAPC2Q13487 334 aa16.57■□□□□ 0.24
HMGN1-211ENST00000471260 NOL9Q5SY16 702 aaKnown RBP16.57■□□□□ 0.24
HMGN1-211ENST00000471260 FBXO46Q6PJ61 603 aaPredicted RBP16.57■□□□□ 0.24
HMGN1-211ENST00000471260 BRI3BPQ8WY22 251 aa16.57■□□□□ 0.24
HMGN1-211ENST00000471260 NSUN4Q96CB9 384 aaKnown RBP16.57■□□□□ 0.24
HMGN1-211ENST00000471260 ERO1AQ96HE7 468 aa16.57■□□□□ 0.24
HMGN1-211ENST00000471260 RFX7Q2KHR2 1363 aa16.56■□□□□ 0.24
HMGN1-211ENST00000471260 IRF6O14896 467 aa16.56■□□□□ 0.24
HMGN1-211ENST00000471260 MAP3K10Q02779 954 aa16.56■□□□□ 0.24
HMGN1-211ENST00000471260 TTC39AQ5SRH9 613 aa16.56■□□□□ 0.24
HMGN1-211ENST00000471260 CEP85Q6P2H3 762 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms