RNA–Protein interactions for RNA: ENST00000471047.1

CLK2-204, Transcript of CDC like kinase 2, humanhuman

TSL 3

Gene CLK2, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-204ENST00000471047 IL17RAQ96F46 866 aa11.84□□□□□ -0.51
CLK2-204ENST00000471047 SEC62Q99442 399 aaKnown RBP11.84□□□□□ -0.51
CLK2-204ENST00000471047 KIF2CQ99661 725 aa11.84□□□□□ -0.51
CLK2-204ENST00000471047 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.84□□□□□ -0.514e-7■■■■□ 19.5
CLK2-204ENST00000471047 TMX4Q9H1E5 349 aaPredicted RBP11.84□□□□□ -0.51
CLK2-204ENST00000471047 CD209Q9NNX6 404 aa11.84□□□□□ -0.51
CLK2-204ENST00000471047 SAGE1Q9NXZ1 904 aa11.84□□□□□ -0.51
CLK2-204ENST00000471047 CCDC171Q6TFL3 1326 aa11.84□□□□□ -0.51
CLK2-204ENST00000471047 SALL1Q9NSC2 1324 aa11.84□□□□□ -0.51
CLK2-204ENST00000471047 C6orf229H3BNL8 230 aa11.83□□□□□ -0.52
CLK2-204ENST00000471047 IDH1O75874 414 aaKnown RBP11.83□□□□□ -0.52
CLK2-204ENST00000471047 PDE6AP16499 860 aa11.83□□□□□ -0.52
CLK2-204ENST00000471047 MAP3K12Q12852 859 aa11.83□□□□□ -0.52
CLK2-204ENST00000471047 SLFNL1Q499Z3 407 aa11.83□□□□□ -0.52
CLK2-204ENST00000471047 SLC9C2Q5TAH2 1124 aa11.83□□□□□ -0.52
CLK2-204ENST00000471047 RGMBQ6NW40 437 aa11.83□□□□□ -0.52
CLK2-204ENST00000471047 CTU1Q7Z7A3 348 aaKnown RBP11.83□□□□□ -0.52
CLK2-204ENST00000471047 ZC3H15Q8WU90 426 aaKnown RBP11.83□□□□□ -0.52
CLK2-204ENST00000471047 APPBP2Q92624 585 aa11.83□□□□□ -0.52
CLK2-204ENST00000471047 MAP4K1Q92918 833 aa11.83□□□□□ -0.52
CLK2-204ENST00000471047 COA1Q9GZY4 146 aa11.83□□□□□ -0.52
CLK2-204ENST00000471047 HPS5Q9UPZ3 1129 aa11.83□□□□□ -0.52
CLK2-204ENST00000471047 MAST3O60307 1309 aa11.83□□□□□ -0.52
CLK2-204ENST00000471047 MAST2Q6P0Q8 1798 aa11.82□□□□□ -0.52
CLK2-204ENST00000471047 HSPA4P34932 840 aa11.82□□□□□ -0.52
CLK2-204ENST00000471047 PTH1RQ03431 593 aa11.82□□□□□ -0.52
CLK2-204ENST00000471047 WASHC4Q2M389 1173 aa11.82□□□□□ -0.52
CLK2-204ENST00000471047 TMED8Q6PL24 325 aaPredicted RBP11.82□□□□□ -0.52
CLK2-204ENST00000471047 KIAA1211Q6ZU35 1233 aa11.82□□□□□ -0.52
CLK2-204ENST00000471047 EYA3Q99504 573 aa11.82□□□□□ -0.52
CLK2-204ENST00000471047 GBA2Q9HCG7 927 aaPredicted RBP11.82□□□□□ -0.52
CLK2-204ENST00000471047 FAM205AQ6ZU69 1335 aa11.82□□□□□ -0.52
CLK2-204ENST00000471047 ZNF532Q9HCE3 1301 aa11.82□□□□□ -0.52
CLK2-204ENST00000471047 YDJCA8MPS7 323 aa11.81□□□□□ -0.52
CLK2-204ENST00000471047 ADM5C9JUS6 153 aa11.81□□□□□ -0.52
CLK2-204ENST00000471047 M0R2C6 588 aa11.81□□□□□ -0.52
CLK2-204ENST00000471047 FRAT2O75474 233 aaPredicted RBP11.81□□□□□ -0.52
CLK2-204ENST00000471047 EGFRP00533 1210 aa11.81□□□□□ -0.52
CLK2-204ENST00000471047 ANP32AP39687 249 aaKnown RBP11.81□□□□□ -0.52
CLK2-204ENST00000471047 ANAPC15P60006 121 aa11.81□□□□□ -0.52
CLK2-204ENST00000471047 NECTIN1Q15223 517 aa11.81□□□□□ -0.52
CLK2-204ENST00000471047 CCDC129Q6ZRS4 1044 aa11.81□□□□□ -0.52
CLK2-204ENST00000471047 MICALL2Q8IY33 904 aa11.81□□□□□ -0.52
CLK2-204ENST00000471047 WDR66Q8TBY9 1149 aa11.81□□□□□ -0.52
CLK2-204ENST00000471047 ZNF384Q8TF68 577 aa11.81□□□□□ -0.52
CLK2-204ENST00000471047 KCNB2Q92953 911 aa11.81□□□□□ -0.52
CLK2-204ENST00000471047 CSRNP1Q96S65 589 aa11.81□□□□□ -0.52
CLK2-204ENST00000471047 ZC3H12CQ9C0D7 883 aaKnown RBP11.81□□□□□ -0.52
CLK2-204ENST00000471047 PUS7LQ9H0K6 701 aaKnown RBP11.81□□□□□ -0.52
CLK2-204ENST00000471047 LRP2BPQ9P2M1 347 aa11.81□□□□□ -0.52
CLK2-204ENST00000471047 CNOT7Q9UIV1 285 aaKnown RBP11.81□□□□□ -0.52
CLK2-204ENST00000471047 ZNF646O15015 1829 aaPredicted RBP11.81□□□□□ -0.52
CLK2-204ENST00000471047 ZNF157P51786 506 aaPredicted RBP11.8□□□□□ -0.52
CLK2-204ENST00000471047 SAMD7Q7Z3H4 446 aa11.8□□□□□ -0.52
CLK2-204ENST00000471047 KRT26Q7Z3Y9 468 aa11.8□□□□□ -0.52
CLK2-204ENST00000471047 ZGPATQ8N5A5 531 aaKnown RBP11.8□□□□□ -0.52
CLK2-204ENST00000471047 SUPT20HQ8NEM7 779 aa11.8□□□□□ -0.52
CLK2-204ENST00000471047 DSCC1Q9BVC3 393 aa11.8□□□□□ -0.52
CLK2-204ENST00000471047 ABCF2Q9UG63 623 aa11.8□□□□□ -0.52
CLK2-204ENST00000471047 ZBTB12Q9Y330 459 aaPredicted RBP11.8□□□□□ -0.52
CLK2-204ENST00000471047 RIMBP2O15034 1052 aa11.79□□□□□ -0.52
CLK2-204ENST00000471047 FOXP2O15409 715 aa11.79□□□□□ -0.52
CLK2-204ENST00000471047 GPAA1O43292 621 aa11.79□□□□□ -0.52
CLK2-204ENST00000471047 HSPD1P10809 573 aaKnown RBP11.79□□□□□ -0.52
CLK2-204ENST00000471047 MCCP23508 829 aa11.79□□□□□ -0.52
CLK2-204ENST00000471047 KIAA2012Q0VF49 1180 aa11.79□□□□□ -0.52
CLK2-204ENST00000471047 CHAF1AQ13111 956 aaPredicted RBP11.79□□□□□ -0.52
CLK2-204ENST00000471047 SPTY2D1Q68D10 685 aaPredicted RBP11.79□□□□□ -0.52
CLK2-204ENST00000471047 MAGEB6Q8N7X4 407 aa11.79□□□□□ -0.52
CLK2-204ENST00000471047 CCDC102AQ96A19 550 aa11.79□□□□□ -0.52
CLK2-204ENST00000471047 NSUN4Q96CB9 384 aaKnown RBP11.79□□□□□ -0.52
CLK2-204ENST00000471047 VPS33BQ9H267 617 aa11.79□□□□□ -0.52
CLK2-204ENST00000471047 PALD1Q9ULE6 856 aa11.79□□□□□ -0.52
CLK2-204ENST00000471047 RBM8AQ9Y5S9 174 aaKnown RBP11.79□□□□□ -0.52
CLK2-204ENST00000471047 H7C1D1 291 aa11.78□□□□□ -0.52
CLK2-204ENST00000471047 SLC10A3P09131 477 aa11.78□□□□□ -0.52
CLK2-204ENST00000471047 PRDX5P30044 214 aa11.78□□□□□ -0.52
CLK2-204ENST00000471047 MECOMQ03112 1051 aa11.78□□□□□ -0.52
CLK2-204ENST00000471047 TNIP1Q15025 636 aa11.78□□□□□ -0.52
CLK2-204ENST00000471047 TBC1D10BQ4KMP7 808 aaPredicted RBP11.78□□□□□ -0.52
CLK2-204ENST00000471047 HABP4Q5JVS0 413 aaKnown RBP11.78□□□□□ -0.52
CLK2-204ENST00000471047 VPS53Q5VIR6 699 aa11.78□□□□□ -0.52
CLK2-204ENST00000471047 ERICH6Q7L0X2 663 aa11.78□□□□□ -0.52
CLK2-204ENST00000471047 PODNQ7Z5L7 613 aa11.78□□□□□ -0.52
CLK2-204ENST00000471047 C2orf69Q8N8R5 385 aa11.78□□□□□ -0.52
CLK2-204ENST00000471047 TBC1D22AQ8WUA7 517 aa11.78□□□□□ -0.52
CLK2-204ENST00000471047 RAI14Q9P0K7 980 aa11.78□□□□□ -0.52
CLK2-204ENST00000471047 U3KPZ7 1027 aaPredicted RBP11.78□□□□□ -0.52
CLK2-204ENST00000471047 PSME4Q14997 1843 aa11.77□□□□□ -0.52
CLK2-204ENST00000471047 CYP7A1P22680 504 aa11.77□□□□□ -0.53
CLK2-204ENST00000471047 GRIK5Q16478 980 aa11.77□□□□□ -0.53
CLK2-204ENST00000471047 DOK7Q18PE1 504 aa11.77□□□□□ -0.53
CLK2-204ENST00000471047 TSGA10IPQ3SY00 556 aa11.77□□□□□ -0.53
CLK2-204ENST00000471047 ADGRA1Q86SQ6 560 aa11.77□□□□□ -0.53
CLK2-204ENST00000471047 RASEFQ8IZ41 740 aa11.77□□□□□ -0.53
CLK2-204ENST00000471047 DDRGK1Q96HY6 314 aa11.77□□□□□ -0.53
CLK2-204ENST00000471047 STRBPQ96SI9 672 aaKnown RBP11.77□□□□□ -0.53
CLK2-204ENST00000471047 SNX14Q9Y5W7 946 aa11.77□□□□□ -0.53
CLK2-204ENST00000471047 SCN9AQ15858 1988 aa11.76□□□□□ -0.53
CLK2-204ENST00000471047 MKI67P46013 3256 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms