RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 TEPSINQ96N21 525 aa19.29■□□□□ 0.68
HDAC6-218ENST00000470942 CSRNP1Q96S65 589 aa19.29■□□□□ 0.68
HDAC6-218ENST00000470942 HMMRO75330 724 aa19.28■□□□□ 0.68
HDAC6-218ENST00000470942 MAP3K11Q16584 847 aa19.28■□□□□ 0.68
HDAC6-218ENST00000470942 FKBP1CQ5VVH2 108 aa19.28■□□□□ 0.68
HDAC6-218ENST00000470942 CDC42EP5Q6NZY7 148 aa19.28■□□□□ 0.68
HDAC6-218ENST00000470942 ERC1Q8IUD2 1116 aa19.28■□□□□ 0.68
HDAC6-218ENST00000470942 CDAN1Q8IWY9 1227 aa19.28■□□□□ 0.68
HDAC6-218ENST00000470942 SLF2Q8IX21 1173 aa19.28■□□□□ 0.68
HDAC6-218ENST00000470942 TNS4Q8IZW8 715 aa19.28■□□□□ 0.68
HDAC6-218ENST00000470942 CCDC8Q9H0W5 538 aaPredicted RBP19.28■□□□□ 0.68
HDAC6-218ENST00000470942 USP40Q9NVE5 1235 aa19.28■□□□□ 0.68
HDAC6-218ENST00000470942 MCAMP43121 646 aa19.27■□□□□ 0.68
HDAC6-218ENST00000470942 HSP90AB4PQ58FF6 505 aa19.27■□□□□ 0.68
HDAC6-218ENST00000470942 TBC1D9Q6ZT07 1266 aa19.27■□□□□ 0.68
HDAC6-218ENST00000470942 FAM83AQ86UY5 434 aa19.27■□□□□ 0.68
HDAC6-218ENST00000470942 REM2Q8IYK8 340 aaPredicted RBP19.27■□□□□ 0.68
HDAC6-218ENST00000470942 SNRKQ9NRH2 765 aa19.27■□□□□ 0.68
HDAC6-218ENST00000470942 EAF2Q96CJ1 260 aaPredicted RBP19.26■□□□□ 0.67
HDAC6-218ENST00000470942 CLMNQ96JQ2 1002 aa19.26■□□□□ 0.67
HDAC6-218ENST00000470942 RAI14Q9P0K7 980 aa19.26■□□□□ 0.67
HDAC6-218ENST00000470942 UNCXA6NJT0 531 aa19.25■□□□□ 0.67
HDAC6-218ENST00000470942 APBB1O00213 710 aa19.25■□□□□ 0.67
HDAC6-218ENST00000470942 TRPA1O75762 1119 aa19.25■□□□□ 0.67
HDAC6-218ENST00000470942 MECOMQ03112 1051 aa19.25■□□□□ 0.67
HDAC6-218ENST00000470942 TCP10Q12799 353 aa19.25■□□□□ 0.67
HDAC6-218ENST00000470942 ANKRD13AQ8IZ07 590 aa19.25■□□□□ 0.67
HDAC6-218ENST00000470942 RNF186Q9NXI6 227 aa19.25■□□□□ 0.67
HDAC6-218ENST00000470942 TLR7Q9NYK1 1049 aaKnown RBP19.25■□□□□ 0.67
HDAC6-218ENST00000470942 LRP2BPQ9P2M1 347 aa19.25■□□□□ 0.67
HDAC6-218ENST00000470942 DBNLQ9UJU6 430 aaKnown RBP19.25■□□□□ 0.67
HDAC6-218ENST00000470942 OTOFQ9HC10 1997 aa19.24■□□□□ 0.67
HDAC6-218ENST00000470942 GSTO1P78417 241 aa19.24■□□□□ 0.67
HDAC6-218ENST00000470942 SPRYD7Q5W111 196 aa19.24■□□□□ 0.67
HDAC6-218ENST00000470942 AACSQ86V21 672 aa19.24■□□□□ 0.67
HDAC6-218ENST00000470942 SIRT2Q8IXJ6 389 aa19.24■□□□□ 0.67
HDAC6-218ENST00000470942 FAM151AQ8WW52 585 aa19.24■□□□□ 0.67
HDAC6-218ENST00000470942 HOOK2Q96ED9 719 aa19.24■□□□□ 0.67
HDAC6-218ENST00000470942 BCL11AQ9H165 835 aa19.24■□□□□ 0.67
HDAC6-218ENST00000470942 IL1RAPL2Q9NP60 686 aa19.24■□□□□ 0.67
HDAC6-218ENST00000470942 CASP8AP2Q9UKL3 1982 aa19.24■□□□□ 0.67
HDAC6-218ENST00000470942 GAKO14976 1311 aa19.24■□□□□ 0.67
HDAC6-218ENST00000470942 LDHCP07864 332 aa19.23■□□□□ 0.67
HDAC6-218ENST00000470942 BTDP43251 543 aa19.23■□□□□ 0.67
HDAC6-218ENST00000470942 NFIAQ12857 509 aa19.23■□□□□ 0.67
HDAC6-218ENST00000470942 IFFO2Q5TF58 517 aa19.23■□□□□ 0.67
HDAC6-218ENST00000470942 RHPN1Q8TCX5 695 aa19.23■□□□□ 0.67
HDAC6-218ENST00000470942 FAM163AQ96GL9 167 aaPredicted RBP19.23■□□□□ 0.67
HDAC6-218ENST00000470942 MROH7-TTC4A0A0A0MT08 1334 aa19.23■□□□□ 0.67
HDAC6-218ENST00000470942 MYO5AQ9Y4I1 1855 aaKnown RBP19.22■□□□□ 0.67
HDAC6-218ENST00000470942 MAP3K9P80192 1104 aa19.22■□□□□ 0.67
HDAC6-218ENST00000470942 NSUN4Q96CB9 384 aaKnown RBP19.22■□□□□ 0.67
HDAC6-218ENST00000470942 KIF1BPQ96EK5 621 aa19.22■□□□□ 0.67
HDAC6-218ENST00000470942 WNK4Q96J92 1243 aa19.22■□□□□ 0.67
HDAC6-218ENST00000470942 ZNF512BQ96KM6 892 aaPredicted RBP19.22■□□□□ 0.67
HDAC6-218ENST00000470942 ELP3Q9H9T3 547 aa19.22■□□□□ 0.67
HDAC6-218ENST00000470942 SAGE1Q9NXZ1 904 aa19.22■□□□□ 0.67
HDAC6-218ENST00000470942 RPAP1Q9BWH6 1393 aaPredicted RBP19.21■□□□□ 0.67
HDAC6-218ENST00000470942 TM4SF4P48230 202 aa19.21■□□□□ 0.67
HDAC6-218ENST00000470942 SREBF2Q12772 1141 aa19.21■□□□□ 0.67
HDAC6-218ENST00000470942 DCAF15Q66K64 600 aa19.21■□□□□ 0.67
HDAC6-218ENST00000470942 ZNF384Q8TF68 577 aa19.21■□□□□ 0.67
HDAC6-218ENST00000470942 FAM198AQ9UFP1 575 aa19.21■□□□□ 0.67
HDAC6-218ENST00000470942 GPR75-ASB3A0A0A6YYF3 556 aa19.2■□□□□ 0.66
HDAC6-218ENST00000470942 RAB11FIP3O75154 756 aa19.2■□□□□ 0.66
HDAC6-218ENST00000470942 CYP2E1P05181 493 aaPredicted RBP19.2■□□□□ 0.66
HDAC6-218ENST00000470942 ZBTB48P10074 688 aaPredicted RBP19.2■□□□□ 0.66
HDAC6-218ENST00000470942 ZAP70P43403 619 aa19.2■□□□□ 0.66
HDAC6-218ENST00000470942 RGS3P49796 1198 aa19.2■□□□□ 0.66
HDAC6-218ENST00000470942 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.2■□□□□ 0.66
HDAC6-218ENST00000470942 MIGA2Q7L4E1 593 aa19.2■□□□□ 0.66
HDAC6-218ENST00000470942 CLASRPQ8N2M8 674 aaKnown RBP19.2■□□□□ 0.66
HDAC6-218ENST00000470942 CSADQ9Y600 493 aa19.2■□□□□ 0.66
HDAC6-218ENST00000470942 MANSC4A6NHS7 340 aaPredicted RBP19.19■□□□□ 0.66
HDAC6-218ENST00000470942 PICALMQ13492 652 aa19.19■□□□□ 0.66
HDAC6-218ENST00000470942 NAA16Q6N069 864 aaPredicted RBP19.19■□□□□ 0.66
HDAC6-218ENST00000470942 ZSCAN29Q8IWY8 852 aaPredicted RBP19.19■□□□□ 0.66
HDAC6-218ENST00000470942 ZFPM1Q8IX07 1006 aa19.19■□□□□ 0.66
HDAC6-218ENST00000470942 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.19■□□□□ 0.66
HDAC6-218ENST00000470942 WRNIP1Q96S55 665 aa19.19■□□□□ 0.66
HDAC6-218ENST00000470942 NOL10Q9BSC4 688 aaKnown RBP19.19■□□□□ 0.66
HDAC6-218ENST00000470942 IDI2Q9BXS1 227 aa19.19■□□□□ 0.66
HDAC6-218ENST00000470942 ZNF341Q9BYN7 854 aa19.19■□□□□ 0.66
HDAC6-218ENST00000470942 ENTPD3O75355 529 aa19.18■□□□□ 0.66
HDAC6-218ENST00000470942 IFIT2P09913 472 aaKnown RBP19.18■□□□□ 0.66
HDAC6-218ENST00000470942 RRP1P56182 461 aaKnown RBP19.18■□□□□ 0.66
HDAC6-218ENST00000470942 VGLL4Q14135 290 aa19.18■□□□□ 0.66
HDAC6-218ENST00000470942 OPTNQ96CV9 577 aa19.18■□□□□ 0.66
HDAC6-218ENST00000470942 MAST2Q6P0Q8 1798 aa19.18■□□□□ 0.66
HDAC6-218ENST00000470942 DOCK2Q92608 1830 aa19.17■□□□□ 0.66
HDAC6-218ENST00000470942 GJA5P36382 358 aa19.17■□□□□ 0.66
HDAC6-218ENST00000470942 INHBEP58166 350 aa19.17■□□□□ 0.66
HDAC6-218ENST00000470942 ZKSCAN4Q969J2 545 aaPredicted RBP19.17■□□□□ 0.66
HDAC6-218ENST00000470942 PIH1D3Q9NQM4 214 aaKnown RBP19.17■□□□□ 0.66
HDAC6-218ENST00000470942 WDHD1O75717 1129 aaPredicted RBP19.16■□□□□ 0.66
HDAC6-218ENST00000470942 TBC1D8O95759 1140 aa19.16■□□□□ 0.66
HDAC6-218ENST00000470942 RHBDL3P58872 404 aa19.16■□□□□ 0.66
HDAC6-218ENST00000470942 CNKSR2Q8WXI2 1034 aa19.16■□□□□ 0.66
HDAC6-218ENST00000470942 DDX4Q9NQI0 724 aaKnown RBP19.16■□□□□ 0.66
HDAC6-218ENST00000470942 NDUFB9Q9Y6M9 179 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms