RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 G3BP1Q13283 466 aaKnown RBP eCLIP11.43□□□□□ -0.58
SHROOM3-203ENST00000469923 RRP1BQ14684 758 aaKnown RBP11.43□□□□□ -0.58
SHROOM3-203ENST00000469923 HHIPL2Q6UWX4 724 aa11.43□□□□□ -0.58
SHROOM3-203ENST00000469923 IFNL1Q8IU54 200 aa11.43□□□□□ -0.58
SHROOM3-203ENST00000469923 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.43□□□□□ -0.58
SHROOM3-203ENST00000469923 WDR66Q8TBY9 1149 aa11.43□□□□□ -0.58
SHROOM3-203ENST00000469923 TBC1D22AQ8WUA7 517 aa11.43□□□□□ -0.58
SHROOM3-203ENST00000469923 BRI3BPQ8WY22 251 aa11.43□□□□□ -0.58
SHROOM3-203ENST00000469923 EAF2Q96CJ1 260 aaPredicted RBP11.43□□□□□ -0.58
SHROOM3-203ENST00000469923 OPTNQ96CV9 577 aa11.43□□□□□ -0.58
SHROOM3-203ENST00000469923 MRIQ9BWK5 157 aa11.43□□□□□ -0.58
SHROOM3-203ENST00000469923 SNCAIPQ9Y6H5 919 aa11.43□□□□□ -0.58
SHROOM3-203ENST00000469923 TNRC18O15417 2968 aaPredicted RBP11.43□□□□□ -0.58
SHROOM3-203ENST00000469923 DDTLA6NHG4 134 aaPredicted RBP11.42□□□□□ -0.58
SHROOM3-203ENST00000469923 GPR25O00155 361 aa11.42□□□□□ -0.58
SHROOM3-203ENST00000469923 APBB1O00213 710 aa11.42□□□□□ -0.58
SHROOM3-203ENST00000469923 PPP1R12BO60237 982 aaPredicted RBP11.42□□□□□ -0.58
SHROOM3-203ENST00000469923 MMP14P50281 582 aa11.42□□□□□ -0.58
SHROOM3-203ENST00000469923 JAG1P78504 1218 aa11.42□□□□□ -0.58
SHROOM3-203ENST00000469923 MECOMQ03112 1051 aa11.42□□□□□ -0.58
SHROOM3-203ENST00000469923 SHROOM1Q2M3G4 852 aaPredicted RBP11.42□□□□□ -0.58
SHROOM3-203ENST00000469923 SLFNL1Q499Z3 407 aa11.42□□□□□ -0.58
SHROOM3-203ENST00000469923 CEP85Q6P2H3 762 aa11.42□□□□□ -0.58
SHROOM3-203ENST00000469923 ADGRA1Q86SQ6 560 aa11.42□□□□□ -0.58
SHROOM3-203ENST00000469923 PIH1D3Q9NQM4 214 aaKnown RBP11.42□□□□□ -0.58
SHROOM3-203ENST00000469923 EXOC6BQ9Y2D4 811 aa11.42□□□□□ -0.58
SHROOM3-203ENST00000469923 WDHD1O75717 1129 aaPredicted RBP11.41□□□□□ -0.58
SHROOM3-203ENST00000469923 CHGBP05060 677 aa11.41□□□□□ -0.58
SHROOM3-203ENST00000469923 RGS3P49796 1198 aa11.41□□□□□ -0.58
SHROOM3-203ENST00000469923 RHBDL3P58872 404 aa11.41□□□□□ -0.58
SHROOM3-203ENST00000469923 FAM43AQ8N2R8 423 aa11.41□□□□□ -0.58
SHROOM3-203ENST00000469923 OTUD5Q96G74 571 aa11.41□□□□□ -0.58
SHROOM3-203ENST00000469923 ANTXR1Q9H6X2 564 aa11.41□□□□□ -0.58
SHROOM3-203ENST00000469923 DBNLQ9UJU6 430 aaKnown RBP11.41□□□□□ -0.58
SHROOM3-203ENST00000469923 FBXO3Q9UK99 471 aa11.41□□□□□ -0.58
SHROOM3-203ENST00000469923 DENND2AQ9ULE3 1009 aa11.41□□□□□ -0.58
SHROOM3-203ENST00000469923 CA12O43570 354 aa11.4□□□□□ -0.58
SHROOM3-203ENST00000469923 CYP2E1P05181 493 aaPredicted RBP11.4□□□□□ -0.58
SHROOM3-203ENST00000469923 BTDP43251 543 aa11.4□□□□□ -0.58
SHROOM3-203ENST00000469923 ZAP70P43403 619 aa11.4□□□□□ -0.58
SHROOM3-203ENST00000469923 IREB2P48200 963 aaKnown RBP11.4□□□□□ -0.58
SHROOM3-203ENST00000469923 SOX10P56693 466 aa11.4□□□□□ -0.58
SHROOM3-203ENST00000469923 EVX2Q03828 476 aa11.4□□□□□ -0.58
SHROOM3-203ENST00000469923 CRHR2Q13324 411 aa11.4□□□□□ -0.58
SHROOM3-203ENST00000469923 PICALMQ13492 652 aa11.4□□□□□ -0.58
SHROOM3-203ENST00000469923 MOGSQ13724 837 aa11.4□□□□□ -0.58
SHROOM3-203ENST00000469923 TNNI3KQ59H18 835 aa11.4□□□□□ -0.58
SHROOM3-203ENST00000469923 SPATA5Q8NB90 893 aa11.4□□□□□ -0.58
SHROOM3-203ENST00000469923 FAM151AQ8WW52 585 aa11.4□□□□□ -0.58
SHROOM3-203ENST00000469923 IL1RAPL2Q9NP60 686 aa11.4□□□□□ -0.58
SHROOM3-203ENST00000469923 SAGE1Q9NXZ1 904 aa11.4□□□□□ -0.58
SHROOM3-203ENST00000469923 PPP2R3BQ9Y5P8 575 aa11.4□□□□□ -0.58
SHROOM3-203ENST00000469923 FPGT-TNNI3KV9GXZ4 949 aa11.4□□□□□ -0.58
SHROOM3-203ENST00000469923 PHF20L1A8MW92 1017 aa11.39□□□□□ -0.59
SHROOM3-203ENST00000469923 IRF6O14896 467 aa11.39□□□□□ -0.59
SHROOM3-203ENST00000469923 DYNLL1P63167 89 aaKnown RBP11.39□□□□□ -0.59
SHROOM3-203ENST00000469923 FTSJ3Q8IY81 847 aaKnown RBP11.39□□□□□ -0.59
SHROOM3-203ENST00000469923 ANKRD13AQ8IZ07 590 aa11.39□□□□□ -0.59
SHROOM3-203ENST00000469923 SH3RF3Q8TEJ3 882 aaPredicted RBP11.39□□□□□ -0.59
SHROOM3-203ENST00000469923 NSUN4Q96CB9 384 aaKnown RBP11.39□□□□□ -0.59
SHROOM3-203ENST00000469923 EDC3Q96F86 508 aaKnown RBP11.39□□□□□ -0.59
SHROOM3-203ENST00000469923 WRNIP1Q96S55 665 aa11.39□□□□□ -0.59
SHROOM3-203ENST00000469923 ARHGAP39Q9C0H5 1083 aa11.39□□□□□ -0.59
SHROOM3-203ENST00000469923 GNL3LQ9NVN8 582 aaKnown RBP11.39□□□□□ -0.59
SHROOM3-203ENST00000469923 NOP58Q9Y2X3 529 aaKnown RBP11.39□□□□□ -0.59
SHROOM3-203ENST00000469923 GAKO14976 1311 aa11.38□□□□□ -0.59
SHROOM3-203ENST00000469923 SALL1Q9NSC2 1324 aa11.38□□□□□ -0.59
SHROOM3-203ENST00000469923 TESPA1A2RU30 521 aaPredicted RBP11.38□□□□□ -0.59
SHROOM3-203ENST00000469923 BTBD19C9JJ37 291 aa11.38□□□□□ -0.59
SHROOM3-203ENST00000469923 SMARCA5O60264 1052 aaPredicted RBP11.38□□□□□ -0.59
SHROOM3-203ENST00000469923 CTGFP29279 349 aa11.38□□□□□ -0.59
SHROOM3-203ENST00000469923 ARID4AP29374 1257 aaPredicted RBP11.38□□□□□ -0.59
SHROOM3-203ENST00000469923 SLC4A8Q2Y0W8 1093 aa11.38□□□□□ -0.59
SHROOM3-203ENST00000469923 GORABQ5T7V8 394 aa11.38□□□□□ -0.59
SHROOM3-203ENST00000469923 FAM83AQ86UY5 434 aa11.38□□□□□ -0.59
SHROOM3-203ENST00000469923 CD99L2Q8TCZ2 262 aa11.38□□□□□ -0.59
SHROOM3-203ENST00000469923 ZBTB40Q9NUA8 1239 aa11.38□□□□□ -0.59
SHROOM3-203ENST00000469923 RAI14Q9P0K7 980 aa11.38□□□□□ -0.59
SHROOM3-203ENST00000469923 ZNF112Q9UJU3 913 aa11.38□□□□□ -0.59
SHROOM3-203ENST00000469923 RCAN3Q9UKA8 241 aa11.38□□□□□ -0.59
SHROOM3-203ENST00000469923 AKAP2Q9Y2D5 859 aa11.38□□□□□ -0.59
SHROOM3-203ENST00000469923 SUGT1Q9Y2Z0 365 aa11.38□□□□□ -0.59
SHROOM3-203ENST00000469923 MKI67P46013 3256 aaKnown RBP11.38□□□□□ -0.59
SHROOM3-203ENST00000469923 MYH13Q9UKX3 1938 aa11.38□□□□□ -0.59
SHROOM3-203ENST00000469923 GPR75-ASB3A0A0A6YYF3 556 aa11.37□□□□□ -0.59
SHROOM3-203ENST00000469923 CCL15-CCL14A0A0B4J2E2 113 aa11.37□□□□□ -0.59
SHROOM3-203ENST00000469923 MANSC4A6NHS7 340 aaPredicted RBP11.37□□□□□ -0.59
SHROOM3-203ENST00000469923 SMIM22K7EJ46 135 aa11.37□□□□□ -0.59
SHROOM3-203ENST00000469923 PEX10O60683 326 aa11.37□□□□□ -0.59
SHROOM3-203ENST00000469923 TNNI2P48788 182 aa11.37□□□□□ -0.59
SHROOM3-203ENST00000469923 OS9Q13438 667 aaPredicted RBP11.37□□□□□ -0.59
SHROOM3-203ENST00000469923 MVPQ14764 893 aaKnown RBP11.37□□□□□ -0.59
SHROOM3-203ENST00000469923 CCL15Q16663 113 aa11.37□□□□□ -0.59
SHROOM3-203ENST00000469923 FKBP1CQ5VVH2 108 aa11.37□□□□□ -0.59
SHROOM3-203ENST00000469923 ERICH6Q7L0X2 663 aa11.37□□□□□ -0.59
SHROOM3-203ENST00000469923 CTU1Q7Z7A3 348 aaKnown RBP11.37□□□□□ -0.59
SHROOM3-203ENST00000469923 FAM163AQ96GL9 167 aaPredicted RBP11.37□□□□□ -0.59
SHROOM3-203ENST00000469923 HPS5Q9UPZ3 1129 aa11.37□□□□□ -0.59
SHROOM3-203ENST00000469923 BRCA2P51587 3418 aa11.37□□□□□ -0.59
SHROOM3-203ENST00000469923 ATRNL1Q5VV63 1379 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms