RNA–Protein interactions for RNA: ENST00000469881.1

NUP98-209, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-209ENST00000469881 CHAF1AQ13111 956 aaPredicted RBP12□□□□□ -0.49
NUP98-209ENST00000469881 FKBP1CQ5VVH2 108 aa12□□□□□ -0.49
NUP98-209ENST00000469881 DCAF15Q66K64 600 aa12□□□□□ -0.49
NUP98-209ENST00000469881 FBXO33Q7Z6M2 555 aa12□□□□□ -0.49
NUP98-209ENST00000469881 SUCLG2Q96I99 432 aa12□□□□□ -0.49
NUP98-209ENST00000469881 ZDHHC15Q96MV8 337 aa12□□□□□ -0.49
NUP98-209ENST00000469881 SRCIN1Q9C0H9 1055 aa12□□□□□ -0.49
NUP98-209ENST00000469881 IQSEC3Q9UPP2 1182 aaPredicted RBP12□□□□□ -0.49
NUP98-209ENST00000469881 RIPOR2Q9Y4F9 1068 aa12□□□□□ -0.49
NUP98-209ENST00000469881 H0YGN5 161 aa11.99□□□□□ -0.49
NUP98-209ENST00000469881 IRF6O14896 467 aa11.99□□□□□ -0.49
NUP98-209ENST00000469881 CAVIN4Q5BKX8 364 aa11.99□□□□□ -0.49
NUP98-209ENST00000469881 SLC4A10Q6U841 1118 aa11.99□□□□□ -0.49
NUP98-209ENST00000469881 ZKSCAN4Q969J2 545 aaPredicted RBP11.99□□□□□ -0.49
NUP98-209ENST00000469881 SHISA4Q96DD7 197 aa11.99□□□□□ -0.49
NUP98-209ENST00000469881 KAZALD1Q96I82 304 aa11.99□□□□□ -0.49
NUP98-209ENST00000469881 SUGT1Q9Y2Z0 365 aa11.99□□□□□ -0.49
NUP98-209ENST00000469881 UTYO14607 1347 aa11.99□□□□□ -0.49
NUP98-209ENST00000469881 KIF16BQ96L93 1317 aa11.99□□□□□ -0.49
NUP98-209ENST00000469881 ADGRA2Q96PE1 1338 aa11.99□□□□□ -0.49
NUP98-209ENST00000469881 ATAD5Q96QE3 1844 aa11.99□□□□□ -0.49
NUP98-209ENST00000469881 ALPK3Q96L96 1907 aa11.99□□□□□ -0.49
NUP98-209ENST00000469881 FRAT2O75474 233 aaPredicted RBP11.98□□□□□ -0.49
NUP98-209ENST00000469881 PPATQ06203 517 aa11.98□□□□□ -0.49
NUP98-209ENST00000469881 RABL6Q3YEC7 729 aaPredicted RBP11.98□□□□□ -0.49
NUP98-209ENST00000469881 METTL24Q5JXM2 366 aa11.98□□□□□ -0.49
NUP98-209ENST00000469881 VGLL2Q8N8G2 317 aa11.98□□□□□ -0.49
NUP98-209ENST00000469881 MRIQ9BWK5 157 aa11.98□□□□□ -0.49
NUP98-209ENST00000469881 ZNF341Q9BYN7 854 aa11.98□□□□□ -0.49
NUP98-209ENST00000469881 PDE8BO95263 885 aa11.97□□□□□ -0.49
NUP98-209ENST00000469881 NBPF7P0C2Y1 421 aaPredicted RBP11.97□□□□□ -0.49
NUP98-209ENST00000469881 APOBEC3HQ6NTF7 200 aaKnown RBP11.97□□□□□ -0.49
NUP98-209ENST00000469881 HHIPL2Q6UWX4 724 aa11.97□□□□□ -0.49
NUP98-209ENST00000469881 C17orf99Q6UX52 265 aa11.97□□□□□ -0.49
NUP98-209ENST00000469881 ANKRD23Q86SG2 305 aa11.97□□□□□ -0.49
NUP98-209ENST00000469881 NKX2-3Q8TAU0 364 aa11.97□□□□□ -0.49
NUP98-209ENST00000469881 BICC1Q9H694 974 aaKnown RBP11.97□□□□□ -0.49
NUP98-209ENST00000469881 SRRDQ9UH36 339 aa11.97□□□□□ -0.49
NUP98-209ENST00000469881 LOC285556D6RIA3 1793 aa11.97□□□□□ -0.49
NUP98-209ENST00000469881 CEP290O15078 2479 aa11.97□□□□□ -0.49
NUP98-209ENST00000469881 MYPNQ86TC9 1320 aa11.96□□□□□ -0.49
NUP98-209ENST00000469881 TRIOBPQ9H2D6 2365 aa11.96□□□□□ -0.49
NUP98-209ENST00000469881 OSBPP22059 807 aa11.96□□□□□ -0.49
NUP98-209ENST00000469881 CTGFP29279 349 aa11.96□□□□□ -0.49
NUP98-209ENST00000469881 MTFR1Q15390 333 aa11.96□□□□□ -0.49
NUP98-209ENST00000469881 LRRC24Q50LG9 513 aa11.96□□□□□ -0.49
NUP98-209ENST00000469881 CHRDL2Q6WN34 429 aa11.96□□□□□ -0.49
NUP98-209ENST00000469881 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.96□□□□□ -0.49
NUP98-209ENST00000469881 TRIM47Q96LD4 638 aa11.96□□□□□ -0.49
NUP98-209ENST00000469881 CPA4Q9UI42 421 aa11.96□□□□□ -0.49
NUP98-209ENST00000469881 KCNH4Q9UQ05 1017 aa11.96□□□□□ -0.49
NUP98-209ENST00000469881 PDHXO00330 501 aa11.95□□□□□ -0.5
NUP98-209ENST00000469881 HOXD10P28358 340 aa11.95□□□□□ -0.5
NUP98-209ENST00000469881 INPP5BP32019 993 aa11.95□□□□□ -0.5
NUP98-209ENST00000469881 GRK4P32298 578 aa11.95□□□□□ -0.5
NUP98-209ENST00000469881 PSMC4P43686 418 aa11.95□□□□□ -0.5
NUP98-209ENST00000469881 BCAMP50895 628 aa11.95□□□□□ -0.5
NUP98-209ENST00000469881 PUM3Q15397 648 aaKnown RBP11.95□□□□□ -0.5
NUP98-209ENST00000469881 ANKRD44Q8N8A2 993 aa11.95□□□□□ -0.5
NUP98-209ENST00000469881 MRS2Q9HD23 443 aa11.95□□□□□ -0.5
NUP98-209ENST00000469881 SALL2Q9Y467 1007 aaPredicted RBP11.95□□□□□ -0.5
NUP98-209ENST00000469881 ECM2O94769 699 aaPredicted RBP11.94□□□□□ -0.5
NUP98-209ENST00000469881 IFIT1P09914 478 aaKnown RBP11.94□□□□□ -0.5
NUP98-209ENST00000469881 GJA8P48165 433 aa11.94□□□□□ -0.5
NUP98-209ENST00000469881 NOL9Q5SY16 702 aaKnown RBP11.94□□□□□ -0.5
NUP98-209ENST00000469881 MIGA2Q7L4E1 593 aa11.94□□□□□ -0.5
NUP98-209ENST00000469881 UBE2Q1Q7Z7E8 422 aa11.94□□□□□ -0.5
NUP98-209ENST00000469881 WDR66Q8TBY9 1149 aa11.94□□□□□ -0.5
NUP98-209ENST00000469881 RAET1EQ8TD07 263 aa11.94□□□□□ -0.5
NUP98-209ENST00000469881 FAM151AQ8WW52 585 aa11.94□□□□□ -0.5
NUP98-209ENST00000469881 PARK7Q99497 189 aaKnown RBP11.94□□□□□ -0.5
NUP98-209ENST00000469881 HTATIP2Q9BUP3 242 aa11.94□□□□□ -0.5
NUP98-209ENST00000469881 ZNF112Q9UJU3 913 aa11.94□□□□□ -0.5
NUP98-209ENST00000469881 FMNL1O95466 1100 aaPredicted RBP11.93□□□□□ -0.5
NUP98-209ENST00000469881 GJB1P08034 283 aa11.93□□□□□ -0.5
NUP98-209ENST00000469881 CCL5P13501 91 aa11.93□□□□□ -0.5
NUP98-209ENST00000469881 FGFR2P21802 821 aa11.93□□□□□ -0.5
NUP98-209ENST00000469881 MOGSQ13724 837 aa11.93□□□□□ -0.5
NUP98-209ENST00000469881 DPF3Q92784 378 aa11.93□□□□□ -0.5
NUP98-209ENST00000469881 RBM27Q9P2N5 1060 aaKnown RBP11.93□□□□□ -0.5
NUP98-209ENST00000469881 DAGLAQ9Y4D2 1042 aa11.93□□□□□ -0.5
NUP98-209ENST00000469881 ATRNL1Q5VV63 1379 aa11.92□□□□□ -0.5
NUP98-209ENST00000469881 BCRP11274 1271 aa11.92□□□□□ -0.5
NUP98-209ENST00000469881 SLC5A1P13866 664 aa11.92□□□□□ -0.5
NUP98-209ENST00000469881 FCGRTP55899 365 aa11.92□□□□□ -0.5
NUP98-209ENST00000469881 UBXN2AP68543 259 aa11.92□□□□□ -0.5
NUP98-209ENST00000469881 PRKCZQ05513 592 aa11.92□□□□□ -0.5
NUP98-209ENST00000469881 SLAIN1Q8ND83 568 aa11.92□□□□□ -0.5
NUP98-209ENST00000469881 KLHDC4Q8TBB5 520 aa11.92□□□□□ -0.5
NUP98-209ENST00000469881 RNF208Q9H0X6 261 aa11.92□□□□□ -0.5
NUP98-209ENST00000469881 RFX7Q2KHR2 1363 aa11.92□□□□□ -0.5
NUP98-209ENST00000469881 DDX60LQ5H9U9 1706 aaKnown RBP11.91□□□□□ -0.5
NUP98-209ENST00000469881 PTPRCP08575 1304 aa11.91□□□□□ -0.5
NUP98-209ENST00000469881 DOCK3Q8IZD9 2030 aa11.91□□□□□ -0.5
NUP98-209ENST00000469881 FARP2O94887 1054 aaPredicted RBP11.91□□□□□ -0.5
NUP98-209ENST00000469881 ZEB1P37275 1124 aaPredicted RBP11.91□□□□□ -0.5
NUP98-209ENST00000469881 TCP10Q12799 353 aa11.91□□□□□ -0.5
NUP98-209ENST00000469881 CDC42EP5Q6NZY7 148 aa11.91□□□□□ -0.5
NUP98-209ENST00000469881 PRO3102Q9H379 93 aa11.91□□□□□ -0.5
NUP98-209ENST00000469881 MAST2Q6P0Q8 1798 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms