RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 HMG20BQ9P0W2 317 aa15.94■□□□□ 0.14
CLRN1-204ENST00000468836 LRP2BPQ9P2M1 347 aa15.94■□□□□ 0.14
CLRN1-204ENST00000468836 TSKSQ9UJT2 592 aa15.94■□□□□ 0.14
CLRN1-204ENST00000468836 FZD1Q9UP38 647 aa15.94■□□□□ 0.14
CLRN1-204ENST00000468836 APBB1O00213 710 aa15.93■□□□□ 0.14
CLRN1-204ENST00000468836 SREBF2Q12772 1141 aa15.93■□□□□ 0.14
CLRN1-204ENST00000468836 FKBP1CQ5VVH2 108 aa15.93■□□□□ 0.14
CLRN1-204ENST00000468836 FAM83AQ86UY5 434 aa15.93■□□□□ 0.14
CLRN1-204ENST00000468836 ANKRD13AQ8IZ07 590 aa15.93■□□□□ 0.14
CLRN1-204ENST00000468836 ZIC5Q96T25 663 aa15.93■□□□□ 0.14
CLRN1-204ENST00000468836 NOL10Q9BSC4 688 aaKnown RBP15.93■□□□□ 0.14
CLRN1-204ENST00000468836 CCDC8Q9H0W5 538 aaPredicted RBP15.93■□□□□ 0.14
CLRN1-204ENST00000468836 POLR2AP24928 1970 aaKnown RBP15.93■□□□□ 0.14
CLRN1-204ENST00000468836 ECM29Q5VYK3 1845 aa15.92■□□□□ 0.14
CLRN1-204ENST00000468836 UNCXA6NJT0 531 aa15.92■□□□□ 0.14
CLRN1-204ENST00000468836 LDHCP07864 332 aa15.92■□□□□ 0.14
CLRN1-204ENST00000468836 MAP3K11Q16584 847 aa15.92■□□□□ 0.14
CLRN1-204ENST00000468836 C20orf194Q5TEA3 1177 aa15.92■□□□□ 0.14
CLRN1-204ENST00000468836 DCAF15Q66K64 600 aa15.92■□□□□ 0.14
CLRN1-204ENST00000468836 PI16Q6UXB8 463 aa15.92■□□□□ 0.14
CLRN1-204ENST00000468836 AACSQ86V21 672 aa15.92■□□□□ 0.14
CLRN1-204ENST00000468836 CSADQ9Y600 493 aa15.92■□□□□ 0.14
CLRN1-204ENST00000468836 MYH13Q9UKX3 1938 aa15.92■□□□□ 0.14
CLRN1-204ENST00000468836 SSC5DA1L4H1 1573 aa15.92■□□□□ 0.14
CLRN1-204ENST00000468836 MCAMP43121 646 aa15.91■□□□□ 0.14
CLRN1-204ENST00000468836 BTDP43251 543 aa15.91■□□□□ 0.14
CLRN1-204ENST00000468836 MECOMQ03112 1051 aa15.91■□□□□ 0.14
CLRN1-204ENST00000468836 TCP10Q12799 353 aa15.91■□□□□ 0.14
CLRN1-204ENST00000468836 LDLRAD1Q5T700 205 aa15.91■□□□□ 0.14
CLRN1-204ENST00000468836 CDC42EP5Q6NZY7 148 aa15.91■□□□□ 0.14
CLRN1-204ENST00000468836 CLASRPQ8N2M8 674 aaKnown RBP15.91■□□□□ 0.14
CLRN1-204ENST00000468836 KIF1BPQ96EK5 621 aa15.91■□□□□ 0.14
CLRN1-204ENST00000468836 SNRKQ9NRH2 765 aa15.91■□□□□ 0.14
CLRN1-204ENST00000468836 SAGE1Q9NXZ1 904 aa15.91■□□□□ 0.14
CLRN1-204ENST00000468836 MROH7-TTC4A0A0A0MT08 1334 aa15.91■□□□□ 0.14
CLRN1-204ENST00000468836 USP2O75604 605 aaPredicted RBP15.9■□□□□ 0.14
CLRN1-204ENST00000468836 TBC1D9Q6ZT07 1266 aa15.9■□□□□ 0.14
CLRN1-204ENST00000468836 ZSCAN29Q8IWY8 852 aaPredicted RBP15.9■□□□□ 0.14
CLRN1-204ENST00000468836 RHPN1Q8TCX5 695 aa15.9■□□□□ 0.14
CLRN1-204ENST00000468836 FAM151AQ8WW52 585 aa15.9■□□□□ 0.14
CLRN1-204ENST00000468836 TEPSINQ96N21 525 aa15.9■□□□□ 0.14
CLRN1-204ENST00000468836 CSRNP1Q96S65 589 aa15.9■□□□□ 0.14
CLRN1-204ENST00000468836 IL1RAPL2Q9NP60 686 aa15.9■□□□□ 0.14
CLRN1-204ENST00000468836 DBNLQ9UJU6 430 aaKnown RBP15.9■□□□□ 0.14
CLRN1-204ENST00000468836 GAKO14976 1311 aa15.9■□□□□ 0.14
CLRN1-204ENST00000468836 RPAP1Q9BWH6 1393 aaPredicted RBP15.89■□□□□ 0.13
CLRN1-204ENST00000468836 RAB11FIP3O75154 756 aa15.89■□□□□ 0.13
CLRN1-204ENST00000468836 TRPA1O75762 1119 aa15.89■□□□□ 0.13
CLRN1-204ENST00000468836 IFIT2P09913 472 aaKnown RBP15.89■□□□□ 0.13
CLRN1-204ENST00000468836 ZBTB48P10074 688 aaPredicted RBP15.89■□□□□ 0.13
CLRN1-204ENST00000468836 SPRYD7Q5W111 196 aa15.89■□□□□ 0.13
CLRN1-204ENST00000468836 CDAN1Q8IWY9 1227 aa15.89■□□□□ 0.13
CLRN1-204ENST00000468836 EAF2Q96CJ1 260 aaPredicted RBP15.89■□□□□ 0.13
CLRN1-204ENST00000468836 CLMNQ96JQ2 1002 aa15.89■□□□□ 0.13
CLRN1-204ENST00000468836 ELP3Q9H9T3 547 aa15.89■□□□□ 0.13
CLRN1-204ENST00000468836 RNF186Q9NXI6 227 aa15.89■□□□□ 0.13
CLRN1-204ENST00000468836 TLR7Q9NYK1 1049 aaKnown RBP15.89■□□□□ 0.13
CLRN1-204ENST00000468836 MANSC4A6NHS7 340 aaPredicted RBP15.88■□□□□ 0.13
CLRN1-204ENST00000468836 RRP1P56182 461 aaKnown RBP15.88■□□□□ 0.13
CLRN1-204ENST00000468836 MAP3K9P80192 1104 aa15.88■□□□□ 0.13
CLRN1-204ENST00000468836 PICALMQ13492 652 aa15.88■□□□□ 0.13
CLRN1-204ENST00000468836 NAA16Q6N069 864 aaPredicted RBP15.88■□□□□ 0.13
CLRN1-204ENST00000468836 WNK4Q96J92 1243 aa15.88■□□□□ 0.13
CLRN1-204ENST00000468836 ZNF512BQ96KM6 892 aaPredicted RBP15.88■□□□□ 0.13
CLRN1-204ENST00000468836 WRNIP1Q96S55 665 aa15.88■□□□□ 0.13
CLRN1-204ENST00000468836 BAG3O95817 575 aa15.87■□□□□ 0.13
CLRN1-204ENST00000468836 ZAP70P43403 619 aa15.87■□□□□ 0.13
CLRN1-204ENST00000468836 RGS3P49796 1198 aa15.87■□□□□ 0.13
CLRN1-204ENST00000468836 NFIAQ12857 509 aa15.87■□□□□ 0.13
CLRN1-204ENST00000468836 NSUN4Q96CB9 384 aaKnown RBP15.87■□□□□ 0.13
CLRN1-204ENST00000468836 FAM163AQ96GL9 167 aaPredicted RBP15.87■□□□□ 0.13
CLRN1-204ENST00000468836 ZNF341Q9BYN7 854 aa15.87■□□□□ 0.13
CLRN1-204ENST00000468836 ENTPD3O75355 529 aa15.86■□□□□ 0.13
CLRN1-204ENST00000468836 IDH1O75874 414 aaKnown RBP15.86■□□□□ 0.13
CLRN1-204ENST00000468836 INHBEP58166 350 aa15.86■□□□□ 0.13
CLRN1-204ENST00000468836 VGLL4Q14135 290 aa15.86■□□□□ 0.13
CLRN1-204ENST00000468836 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.86■□□□□ 0.13
CLRN1-204ENST00000468836 OPTNQ96CV9 577 aa15.86■□□□□ 0.13
CLRN1-204ENST00000468836 GPR75-ASB3A0A0A6YYF3 556 aa15.85■□□□□ 0.13
CLRN1-204ENST00000468836 IGSF3O75054 1194 aa15.85■□□□□ 0.13
CLRN1-204ENST00000468836 MAP4K4O95819 1239 aaPredicted RBP15.85■□□□□ 0.13
CLRN1-204ENST00000468836 ALDH1A1P00352 501 aa15.85■□□□□ 0.13
CLRN1-204ENST00000468836 CYP2E1P05181 493 aaPredicted RBP15.85■□□□□ 0.13
CLRN1-204ENST00000468836 OTUD7BQ6GQQ9 843 aa15.85■□□□□ 0.13
CLRN1-204ENST00000468836 MIGA2Q7L4E1 593 aa15.85■□□□□ 0.13
CLRN1-204ENST00000468836 SIRT2Q8IXJ6 389 aa15.85■□□□□ 0.13
CLRN1-204ENST00000468836 IDI2Q9BXS1 227 aa15.85■□□□□ 0.13
CLRN1-204ENST00000468836 FAM198AQ9UFP1 575 aa15.85■□□□□ 0.13
CLRN1-204ENST00000468836 PLCG2P16885 1265 aa15.84■□□□□ 0.13
CLRN1-204ENST00000468836 TM4SF4P48230 202 aa15.84■□□□□ 0.13
CLRN1-204ENST00000468836 TEX11Q8IYF3 940 aa15.84■□□□□ 0.13
CLRN1-204ENST00000468836 OTUD5Q96G74 571 aa15.84■□□□□ 0.13
CLRN1-204ENST00000468836 LRRCC1Q9C099 1032 aa15.84■□□□□ 0.13
CLRN1-204ENST00000468836 MAP3K12Q12852 859 aa15.83■□□□□ 0.12
CLRN1-204ENST00000468836 TTF1Q15361 905 aaPredicted RBP15.83■□□□□ 0.12
CLRN1-204ENST00000468836 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.83■□□□□ 0.12
CLRN1-204ENST00000468836 ZKSCAN4Q969J2 545 aaPredicted RBP15.83■□□□□ 0.12
CLRN1-204ENST00000468836 DNAJC2Q99543 621 aaKnown RBP15.83■□□□□ 0.12
CLRN1-204ENST00000468836 AATFQ9NY61 560 aaKnown RBP eCLIP15.83■□□□□ 0.12
CLRN1-204ENST00000468836 WDHD1O75717 1129 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms