RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 FGFR2P21802 821 aa12.97□□□□□ -0.33
GPNMB-206ENST00000465673 OSBPP22059 807 aa12.97□□□□□ -0.33
GPNMB-206ENST00000465673 PSMC4P43686 418 aa12.97□□□□□ -0.33
GPNMB-206ENST00000465673 NFIAQ12857 509 aa12.97□□□□□ -0.33
GPNMB-206ENST00000465673 DIXDC1Q155Q3 683 aa12.97□□□□□ -0.33
GPNMB-206ENST00000465673 ZFPM1Q8IX07 1006 aa12.97□□□□□ -0.33
GPNMB-206ENST00000465673 ZNF341Q9BYN7 854 aa12.97□□□□□ -0.33
GPNMB-206ENST00000465673 WDHD1O75717 1129 aaPredicted RBP12.96□□□□□ -0.33
GPNMB-206ENST00000465673 SLURP2P0DP57 97 aa12.96□□□□□ -0.33
GPNMB-206ENST00000465673 PPATQ06203 517 aa12.96□□□□□ -0.33
GPNMB-206ENST00000465673 MOGSQ13724 837 aa12.96□□□□□ -0.33
GPNMB-206ENST00000465673 FKBP1CQ5VVH2 108 aa12.96□□□□□ -0.33
GPNMB-206ENST00000465673 CDC42EP5Q6NZY7 148 aa12.96□□□□□ -0.33
GPNMB-206ENST00000465673 HHIPL2Q6UWX4 724 aa12.96□□□□□ -0.33
GPNMB-206ENST00000465673 CHRDL2Q6WN34 429 aa12.96□□□□□ -0.33
GPNMB-206ENST00000465673 FAM9BQ8IZU0 186 aa12.96□□□□□ -0.33
GPNMB-206ENST00000465673 MRPL50Q8N5N7 158 aaKnown RBP12.96□□□□□ -0.33
GPNMB-206ENST00000465673 MRIQ9BWK5 157 aa12.96□□□□□ -0.33
GPNMB-206ENST00000465673 SRRDQ9UH36 339 aa12.96□□□□□ -0.33
GPNMB-206ENST00000465673 ADGRA2Q96PE1 1338 aa12.95□□□□□ -0.34
GPNMB-206ENST00000465673 FMNL1O95466 1100 aaPredicted RBP12.95□□□□□ -0.34
GPNMB-206ENST00000465673 DCAF15Q66K64 600 aa12.95□□□□□ -0.34
GPNMB-206ENST00000465673 FAM151AQ8WW52 585 aa12.95□□□□□ -0.34
GPNMB-206ENST00000465673 DPF3Q92784 378 aa12.95□□□□□ -0.34
GPNMB-206ENST00000465673 USP44Q9H0E7 712 aa12.95□□□□□ -0.34
GPNMB-206ENST00000465673 ZCCHC17Q9NP64 241 aaKnown RBP12.95□□□□□ -0.34
GPNMB-206ENST00000465673 DAGLAQ9Y4D2 1042 aa12.95□□□□□ -0.34
GPNMB-206ENST00000465673 IFIT1P09914 478 aaKnown RBP12.94□□□□□ -0.34
GPNMB-206ENST00000465673 CYP2C8P10632 490 aa12.94□□□□□ -0.34
GPNMB-206ENST00000465673 PRDX5P30044 214 aa12.94□□□□□ -0.34
GPNMB-206ENST00000465673 RFX5P48382 616 aaPredicted RBP12.94□□□□□ -0.34
GPNMB-206ENST00000465673 PUM3Q15397 648 aaKnown RBP12.94□□□□□ -0.34
GPNMB-206ENST00000465673 GPAT2Q6NUI2 795 aa12.94□□□□□ -0.34
GPNMB-206ENST00000465673 ANKRD23Q86SG2 305 aa12.94□□□□□ -0.34
GPNMB-206ENST00000465673 RAET1EQ8TD07 263 aa12.94□□□□□ -0.34
GPNMB-206ENST00000465673 RBM27Q9P2N5 1060 aaKnown RBP12.94□□□□□ -0.34
GPNMB-206ENST00000465673 FAM198AQ9UFP1 575 aa12.94□□□□□ -0.34
GPNMB-206ENST00000465673 ZNF112Q9UJU3 913 aa12.94□□□□□ -0.34
GPNMB-206ENST00000465673 GABRQQ9UN88 632 aa12.94□□□□□ -0.34
GPNMB-206ENST00000465673 KCNH4Q9UQ05 1017 aa12.94□□□□□ -0.34
GPNMB-206ENST00000465673 SUGT1Q9Y2Z0 365 aa12.94□□□□□ -0.34
GPNMB-206ENST00000465673 SZT2Q5T011 3432 aa12.94□□□□□ -0.34
GPNMB-206ENST00000465673 MAST3O60307 1309 aa12.93□□□□□ -0.34
GPNMB-206ENST00000465673 MYPNQ86TC9 1320 aa12.93□□□□□ -0.34
GPNMB-206ENST00000465673 EYA2O00167 538 aa12.93□□□□□ -0.34
GPNMB-206ENST00000465673 GNRH1P01148 92 aa12.93□□□□□ -0.34
GPNMB-206ENST00000465673 CCL5P13501 91 aa12.93□□□□□ -0.34
GPNMB-206ENST00000465673 GRK4P32298 578 aa12.93□□□□□ -0.34
GPNMB-206ENST00000465673 PRMT2P55345 433 aa12.93□□□□□ -0.34
GPNMB-206ENST00000465673 PRKCZQ05513 592 aa12.93□□□□□ -0.34
GPNMB-206ENST00000465673 HOOK2Q96ED9 719 aa12.93□□□□□ -0.34
GPNMB-206ENST00000465673 USP40Q9NVE5 1235 aa12.93□□□□□ -0.34
GPNMB-206ENST00000465673 RPAP1Q9BWH6 1393 aaPredicted RBP12.93□□□□□ -0.34
GPNMB-206ENST00000465673 SLC5A1P13866 664 aa12.92□□□□□ -0.34
GPNMB-206ENST00000465673 ATG9AQ7Z3C6 839 aa12.92□□□□□ -0.34
GPNMB-206ENST00000465673 UBE2Q1Q7Z7E8 422 aa12.92□□□□□ -0.34
GPNMB-206ENST00000465673 WDR66Q8TBY9 1149 aa12.92□□□□□ -0.34
GPNMB-206ENST00000465673 SSH1Q8WYL5 1049 aa12.92□□□□□ -0.34
GPNMB-206ENST00000465673 LPIN2Q92539 896 aa12.92□□□□□ -0.34
GPNMB-206ENST00000465673 RNF208Q9H0X6 261 aa12.92□□□□□ -0.34
GPNMB-206ENST00000465673 SIL1Q9H173 461 aa12.92□□□□□ -0.34
GPNMB-206ENST00000465673 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.92□□□□□ -0.34
GPNMB-206ENST00000465673 BIN2Q9UBW5 565 aaPredicted RBP12.92□□□□□ -0.34
GPNMB-206ENST00000465673 RANBP2P49792 3224 aaKnown RBP12.91□□□□□ -0.34
GPNMB-206ENST00000465673 ANP32CO43423 234 aa12.91□□□□□ -0.34
GPNMB-206ENST00000465673 GJB1P08034 283 aa12.91□□□□□ -0.34
GPNMB-206ENST00000465673 BCRP11274 1271 aa12.91□□□□□ -0.34
GPNMB-206ENST00000465673 ZEB1P37275 1124 aaPredicted RBP12.91□□□□□ -0.34
GPNMB-206ENST00000465673 GJA8P48165 433 aa12.91□□□□□ -0.34
GPNMB-206ENST00000465673 SH3BP5LQ7L8J4 393 aa12.91□□□□□ -0.34
GPNMB-206ENST00000465673 CCDC84Q86UT8 332 aaPredicted RBP12.91□□□□□ -0.34
GPNMB-206ENST00000465673 UNC93B1Q9H1C4 597 aa12.91□□□□□ -0.34
GPNMB-206ENST00000465673 ZHX2Q9Y6X8 837 aa12.91□□□□□ -0.34
GPNMB-206ENST00000465673 ZNF521Q96K83 1311 aa12.9□□□□□ -0.34
GPNMB-206ENST00000465673 KIF16BQ96L93 1317 aa12.9□□□□□ -0.34
GPNMB-206ENST00000465673 AK9Q5TCS8 1911 aa12.9□□□□□ -0.34
GPNMB-206ENST00000465673 PHF20L1A8MW92 1017 aa12.9□□□□□ -0.34
GPNMB-206ENST00000465673 LDHBP07195 334 aaKnown RBP12.9□□□□□ -0.34
GPNMB-206ENST00000465673 ELNP15502 786 aa12.9□□□□□ -0.34
GPNMB-206ENST00000465673 HOXD10P28358 340 aa12.9□□□□□ -0.34
GPNMB-206ENST00000465673 PHKA1P46020 1223 aa12.9□□□□□ -0.34
GPNMB-206ENST00000465673 NOL9Q5SY16 702 aaKnown RBP12.9□□□□□ -0.34
GPNMB-206ENST00000465673 CXCL11O14625 94 aa12.89□□□□□ -0.35
GPNMB-206ENST00000465673 ADORA1P30542 326 aa12.89□□□□□ -0.35
GPNMB-206ENST00000465673 RGS3P49796 1198 aa12.89□□□□□ -0.35
GPNMB-206ENST00000465673 FCGRTP55899 365 aa12.89□□□□□ -0.35
GPNMB-206ENST00000465673 ATP2B3Q16720 1220 aa12.89□□□□□ -0.35
GPNMB-206ENST00000465673 GADL1Q6ZQY3 521 aa12.89□□□□□ -0.35
GPNMB-206ENST00000465673 U2AF1L4Q8WU68 220 aaKnown RBP12.89□□□□□ -0.35
GPNMB-206ENST00000465673 PARK7Q99497 189 aaKnown RBP12.89□□□□□ -0.35
GPNMB-206ENST00000465673 PA2G4Q9UQ80 394 aaKnown RBP12.89□□□□□ -0.35
GPNMB-206ENST00000465673 ATRNL1Q5VV63 1379 aa12.89□□□□□ -0.35
GPNMB-206ENST00000465673 PTPRCP08575 1304 aa12.88□□□□□ -0.35
GPNMB-206ENST00000465673 DDTLA6NHG4 134 aaPredicted RBP12.88□□□□□ -0.35
GPNMB-206ENST00000465673 FLT3LGP49771 235 aa12.88□□□□□ -0.35
GPNMB-206ENST00000465673 ZSCAN29Q8IWY8 852 aaPredicted RBP12.88□□□□□ -0.35
GPNMB-206ENST00000465673 SCYL3Q8IZE3 742 aa12.88□□□□□ -0.35
GPNMB-206ENST00000465673 PRO3102Q9H379 93 aa12.88□□□□□ -0.35
GPNMB-206ENST00000465673 A0A0G2JLL6 359 aaPredicted RBP12.87□□□□□ -0.35
GPNMB-206ENST00000465673 ADCY3O60266 1144 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms