RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 USP2O75604 605 aaPredicted RBP23.19■■□□□ 1.3
SLC6A1-204ENST00000462473 CDC42EP5Q6NZY7 148 aa23.19■■□□□ 1.3
SLC6A1-204ENST00000462473 FAM83AQ86UY5 434 aa23.19■■□□□ 1.3
SLC6A1-204ENST00000462473 REM2Q8IYK8 340 aaPredicted RBP23.19■■□□□ 1.3
SLC6A1-204ENST00000462473 EAF2Q96CJ1 260 aaPredicted RBP23.19■■□□□ 1.3
SLC6A1-204ENST00000462473 SLC10A4Q96EP9 437 aa23.19■■□□□ 1.3
SLC6A1-204ENST00000462473 CSRNP1Q96S65 589 aa23.19■■□□□ 1.3
SLC6A1-204ENST00000462473 CCDC8Q9H0W5 538 aaPredicted RBP23.19■■□□□ 1.3
SLC6A1-204ENST00000462473 TSKSQ9UJT2 592 aa23.19■■□□□ 1.3
SLC6A1-204ENST00000462473 PCNTO95613 3336 aa23.18■■□□□ 1.3
SLC6A1-204ENST00000462473 TBC1D9Q6ZT07 1266 aa23.18■■□□□ 1.3
SLC6A1-204ENST00000462473 CDAN1Q8IWY9 1227 aa23.18■■□□□ 1.3
SLC6A1-204ENST00000462473 USP40Q9NVE5 1235 aa23.18■■□□□ 1.3
SLC6A1-204ENST00000462473 UNCXA6NJT0 531 aa23.17■■□□□ 1.3
SLC6A1-204ENST00000462473 MKRN3Q13064 507 aaKnown RBP23.17■■□□□ 1.3
SLC6A1-204ENST00000462473 SIRT2Q8IXJ6 389 aa23.17■■□□□ 1.3
SLC6A1-204ENST00000462473 SNRKQ9NRH2 765 aa23.17■■□□□ 1.3
SLC6A1-204ENST00000462473 RAI14Q9P0K7 980 aa23.17■■□□□ 1.3
SLC6A1-204ENST00000462473 DBNLQ9UJU6 430 aaKnown RBP23.17■■□□□ 1.3
SLC6A1-204ENST00000462473 MECOMQ03112 1051 aa23.16■■□□□ 1.3
SLC6A1-204ENST00000462473 ANKRD13AQ8IZ07 590 aa23.16■■□□□ 1.3
SLC6A1-204ENST00000462473 RHPN1Q8TCX5 695 aa23.16■■□□□ 1.3
SLC6A1-204ENST00000462473 CLMNQ96JQ2 1002 aa23.16■■□□□ 1.3
SLC6A1-204ENST00000462473 TLR7Q9NYK1 1049 aaKnown RBP23.16■■□□□ 1.3
SLC6A1-204ENST00000462473 LRP2BPQ9P2M1 347 aa23.16■■□□□ 1.3
SLC6A1-204ENST00000462473 GAKO14976 1311 aa23.15■■□□□ 1.3
SLC6A1-204ENST00000462473 APBB1O00213 710 aa23.15■■□□□ 1.3
SLC6A1-204ENST00000462473 AACSQ86V21 672 aa23.15■■□□□ 1.3
SLC6A1-204ENST00000462473 TNS4Q8IZW8 715 aa23.15■■□□□ 1.3
SLC6A1-204ENST00000462473 FAM151AQ8WW52 585 aa23.15■■□□□ 1.3
SLC6A1-204ENST00000462473 HOOK2Q96ED9 719 aa23.15■■□□□ 1.3
SLC6A1-204ENST00000462473 FAM163AQ96GL9 167 aaPredicted RBP23.15■■□□□ 1.3
SLC6A1-204ENST00000462473 ZNF512BQ96KM6 892 aaPredicted RBP23.15■■□□□ 1.3
SLC6A1-204ENST00000462473 LDHCP07864 332 aa23.14■■□□□ 1.29
SLC6A1-204ENST00000462473 GSTO1P78417 241 aa23.14■■□□□ 1.29
SLC6A1-204ENST00000462473 TCP10Q12799 353 aa23.14■■□□□ 1.29
SLC6A1-204ENST00000462473 SPRYD7Q5W111 196 aa23.14■■□□□ 1.29
SLC6A1-204ENST00000462473 IL1RAPL2Q9NP60 686 aa23.14■■□□□ 1.29
SLC6A1-204ENST00000462473 RNF186Q9NXI6 227 aa23.14■■□□□ 1.29
SLC6A1-204ENST00000462473 MROH7-TTC4A0A0A0MT08 1334 aa23.13■■□□□ 1.29
SLC6A1-204ENST00000462473 TRPA1O75762 1119 aa23.13■■□□□ 1.29
SLC6A1-204ENST00000462473 BTDP43251 543 aa23.13■■□□□ 1.29
SLC6A1-204ENST00000462473 NFIAQ12857 509 aa23.13■■□□□ 1.29
SLC6A1-204ENST00000462473 NSUN4Q96CB9 384 aaKnown RBP23.13■■□□□ 1.29
SLC6A1-204ENST00000462473 KIF1BPQ96EK5 621 aa23.13■■□□□ 1.29
SLC6A1-204ENST00000462473 SAGE1Q9NXZ1 904 aa23.13■■□□□ 1.29
SLC6A1-204ENST00000462473 RAB11FIP3O75154 756 aa23.12■■□□□ 1.29
SLC6A1-204ENST00000462473 MAP3K9P80192 1104 aa23.12■■□□□ 1.29
SLC6A1-204ENST00000462473 CLASRPQ8N2M8 674 aaKnown RBP23.12■■□□□ 1.29
SLC6A1-204ENST00000462473 GPR75-ASB3A0A0A6YYF3 556 aa23.11■■□□□ 1.29
SLC6A1-204ENST00000462473 ZAP70P43403 619 aa23.11■■□□□ 1.29
SLC6A1-204ENST00000462473 SREBF2Q12772 1141 aa23.11■■□□□ 1.29
SLC6A1-204ENST00000462473 DCAF15Q66K64 600 aa23.11■■□□□ 1.29
SLC6A1-204ENST00000462473 ZNF384Q8TF68 577 aa23.11■■□□□ 1.29
SLC6A1-204ENST00000462473 WNK4Q96J92 1243 aa23.11■■□□□ 1.29
SLC6A1-204ENST00000462473 IDI2Q9BXS1 227 aa23.11■■□□□ 1.29
SLC6A1-204ENST00000462473 BCL11AQ9H165 835 aa23.11■■□□□ 1.29
SLC6A1-204ENST00000462473 FAM198AQ9UFP1 575 aa23.11■■□□□ 1.29
SLC6A1-204ENST00000462473 RPAP1Q9BWH6 1393 aaPredicted RBP23.11■■□□□ 1.29
SLC6A1-204ENST00000462473 CYP2E1P05181 493 aaPredicted RBP23.1■■□□□ 1.29
SLC6A1-204ENST00000462473 ZBTB48P10074 688 aaPredicted RBP23.1■■□□□ 1.29
SLC6A1-204ENST00000462473 TM4SF4P48230 202 aa23.1■■□□□ 1.29
SLC6A1-204ENST00000462473 RRP1P56182 461 aaKnown RBP23.1■■□□□ 1.29
SLC6A1-204ENST00000462473 IFFO2Q5TF58 517 aa23.1■■□□□ 1.29
SLC6A1-204ENST00000462473 ELP3Q9H9T3 547 aa23.1■■□□□ 1.29
SLC6A1-204ENST00000462473 CSADQ9Y600 493 aa23.1■■□□□ 1.29
SLC6A1-204ENST00000462473 MYH2Q9UKX2 1941 aa23.1■■□□□ 1.29
SLC6A1-204ENST00000462473 RGS3P49796 1198 aa23.09■■□□□ 1.29
SLC6A1-204ENST00000462473 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.09■■□□□ 1.29
SLC6A1-204ENST00000462473 MIGA2Q7L4E1 593 aa23.09■■□□□ 1.29
SLC6A1-204ENST00000462473 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.09■■□□□ 1.29
SLC6A1-204ENST00000462473 MANSC4A6NHS7 340 aaPredicted RBP23.08■■□□□ 1.29
SLC6A1-204ENST00000462473 ENTPD3O75355 529 aa23.08■■□□□ 1.29
SLC6A1-204ENST00000462473 IFIT2P09913 472 aaKnown RBP23.08■■□□□ 1.29
SLC6A1-204ENST00000462473 NAA16Q6N069 864 aaPredicted RBP23.08■■□□□ 1.29
SLC6A1-204ENST00000462473 WRNIP1Q96S55 665 aa23.08■■□□□ 1.29
SLC6A1-204ENST00000462473 NOL10Q9BSC4 688 aaKnown RBP23.08■■□□□ 1.29
SLC6A1-204ENST00000462473 ZNF341Q9BYN7 854 aa23.08■■□□□ 1.29
SLC6A1-204ENST00000462473 INHBEP58166 350 aa23.07■■□□□ 1.28
SLC6A1-204ENST00000462473 PICALMQ13492 652 aa23.07■■□□□ 1.28
SLC6A1-204ENST00000462473 VGLL4Q14135 290 aa23.07■■□□□ 1.28
SLC6A1-204ENST00000462473 ZSCAN29Q8IWY8 852 aaPredicted RBP23.07■■□□□ 1.28
SLC6A1-204ENST00000462473 ZFPM1Q8IX07 1006 aa23.07■■□□□ 1.28
SLC6A1-204ENST00000462473 OPTNQ96CV9 577 aa23.07■■□□□ 1.28
SLC6A1-204ENST00000462473 WDHD1O75717 1129 aaPredicted RBP23.06■■□□□ 1.28
SLC6A1-204ENST00000462473 RHBDL3P58872 404 aa23.06■■□□□ 1.28
SLC6A1-204ENST00000462473 PIH1D3Q9NQM4 214 aaKnown RBP23.06■■□□□ 1.28
SLC6A1-204ENST00000462473 IGSF3O75054 1194 aa23.05■■□□□ 1.28
SLC6A1-204ENST00000462473 MAP4K4O95819 1239 aaPredicted RBP23.05■■□□□ 1.28
SLC6A1-204ENST00000462473 GJA5P36382 358 aa23.05■■□□□ 1.28
SLC6A1-204ENST00000462473 DDX4Q9NQI0 724 aaKnown RBP23.05■■□□□ 1.28
SLC6A1-204ENST00000462473 NDUFB9Q9Y6M9 179 aa23.05■■□□□ 1.28
SLC6A1-204ENST00000462473 AKAP11Q9UKA4 1901 aa23.04■■□□□ 1.28
SLC6A1-204ENST00000462473 IDH1O75874 414 aaKnown RBP23.04■■□□□ 1.28
SLC6A1-204ENST00000462473 BAG3O95817 575 aa23.04■■□□□ 1.28
SLC6A1-204ENST00000462473 ZKSCAN4Q969J2 545 aaPredicted RBP23.04■■□□□ 1.28
SLC6A1-204ENST00000462473 TBC1D8O95759 1140 aa23.03■■□□□ 1.28
SLC6A1-204ENST00000462473 LRRCC1Q9C099 1032 aa23.03■■□□□ 1.28
SLC6A1-204ENST00000462473 AATFQ9NY61 560 aaKnown RBP eCLIP23.03■■□□□ 1.28
SLC6A1-204ENST00000462473 RFX7Q2KHR2 1363 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms