RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 HOOK2Q96ED9 719 aa23.43■■□□□ 1.34
VARS-220ENST00000461874 MYH13Q9UKX3 1938 aa23.42■■□□□ 1.34
VARS-220ENST00000461874 IGF2BP3O00425 579 aaKnown RBP eCLIP23.42■■□□□ 1.34
VARS-220ENST00000461874 RLBP1P12271 317 aa23.42■■□□□ 1.34
VARS-220ENST00000461874 VGLL4Q14135 290 aa23.42■■□□□ 1.34
VARS-220ENST00000461874 POLA2Q14181 598 aa23.42■■□□□ 1.34
VARS-220ENST00000461874 NEUROD6Q96NK8 337 aa23.42■■□□□ 1.34
VARS-220ENST00000461874 CSADQ9Y600 493 aa23.42■■□□□ 1.34
VARS-220ENST00000461874 RPAP1Q9BWH6 1393 aaPredicted RBP23.41■■□□□ 1.34
VARS-220ENST00000461874 TESPA1A2RU30 521 aaPredicted RBP23.41■■□□□ 1.34
VARS-220ENST00000461874 ATP8B2P98198 1209 aa23.41■■□□□ 1.34
VARS-220ENST00000461874 FAM151AQ8WW52 585 aa23.41■■□□□ 1.34
VARS-220ENST00000461874 ZBTB7BO15156 539 aaPredicted RBP23.4■■□□□ 1.34
VARS-220ENST00000461874 ITPRIPQ8IWB1 547 aa23.4■■□□□ 1.34
VARS-220ENST00000461874 SSH3Q8TE77 659 aa23.4■■□□□ 1.34
VARS-220ENST00000461874 CNKSR2Q8WXI2 1034 aa23.4■■□□□ 1.34
VARS-220ENST00000461874 USP40Q9NVE5 1235 aa23.4■■□□□ 1.34
VARS-220ENST00000461874 ABCF2Q9UG63 623 aa23.4■■□□□ 1.34
VARS-220ENST00000461874 NFIAQ12857 509 aa23.39■■□□□ 1.33
VARS-220ENST00000461874 DCAF15Q66K64 600 aa23.39■■□□□ 1.33
VARS-220ENST00000461874 SPTY2D1Q68D10 685 aaPredicted RBP23.39■■□□□ 1.33
VARS-220ENST00000461874 OTUD7BQ6GQQ9 843 aa23.39■■□□□ 1.33
VARS-220ENST00000461874 MS4A4AQ96JQ5 239 aa23.39■■□□□ 1.33
VARS-220ENST00000461874 PTPN18Q99952 460 aa23.39■■□□□ 1.33
VARS-220ENST00000461874 GAKO14976 1311 aa23.38■■□□□ 1.33
VARS-220ENST00000461874 FKTNO75072 461 aa23.38■■□□□ 1.33
VARS-220ENST00000461874 TCP10Q12799 353 aa23.38■■□□□ 1.33
VARS-220ENST00000461874 GORABQ5T7V8 394 aa23.38■■□□□ 1.33
VARS-220ENST00000461874 DZIP1Q86YF9 867 aaKnown RBP23.38■■□□□ 1.33
VARS-220ENST00000461874 FAM163AQ96GL9 167 aaPredicted RBP23.38■■□□□ 1.33
VARS-220ENST00000461874 WRNIP1Q96S55 665 aa23.38■■□□□ 1.33
VARS-220ENST00000461874 C1orf115Q9H7X2 142 aa23.38■■□□□ 1.33
VARS-220ENST00000461874 HMG20BQ9P0W2 317 aa23.38■■□□□ 1.33
VARS-220ENST00000461874 FAM198AQ9UFP1 575 aa23.38■■□□□ 1.33
VARS-220ENST00000461874 PKN2Q16513 984 aaKnown RBP23.37■■□□□ 1.33
VARS-220ENST00000461874 MIGA2Q7L4E1 593 aa23.37■■□□□ 1.33
VARS-220ENST00000461874 SLF2Q8IX21 1173 aa23.37■■□□□ 1.33
VARS-220ENST00000461874 ZNF341Q9BYN7 854 aa23.37■■□□□ 1.33
VARS-220ENST00000461874 SNCAIPQ9Y6H5 919 aa23.37■■□□□ 1.33
VARS-220ENST00000461874 OTOFQ9HC10 1997 aa23.37■■□□□ 1.33
VARS-220ENST00000461874 SPDYE5A6NIY4 337 aa23.36■■□□□ 1.33
VARS-220ENST00000461874 ARID4AP29374 1257 aaPredicted RBP23.36■■□□□ 1.33
VARS-220ENST00000461874 RGS19P49795 217 aa23.36■■□□□ 1.33
VARS-220ENST00000461874 GTF2A2P52657 109 aa23.36■■□□□ 1.33
VARS-220ENST00000461874 SPATA5Q8NB90 893 aa23.36■■□□□ 1.33
VARS-220ENST00000461874 ZKSCAN4Q969J2 545 aaPredicted RBP23.36■■□□□ 1.33
VARS-220ENST00000461874 OTUD5Q96G74 571 aa23.36■■□□□ 1.33
VARS-220ENST00000461874 GPR108Q9NPR9 543 aa23.36■■□□□ 1.33
VARS-220ENST00000461874 ERICH6Q7L0X2 663 aa23.35■■□□□ 1.33
VARS-220ENST00000461874 ERO1BQ86YB8 467 aa23.35■■□□□ 1.33
VARS-220ENST00000461874 BRI3BPQ8WY22 251 aa23.35■■□□□ 1.33
VARS-220ENST00000461874 IDI2Q9BXS1 227 aa23.35■■□□□ 1.33
VARS-220ENST00000461874 LAMB1P07942 1786 aa23.35■■□□□ 1.33
VARS-220ENST00000461874 SURF6O75683 361 aaKnown RBP23.34■■□□□ 1.33
VARS-220ENST00000461874 CRHR2Q13324 411 aa23.34■■□□□ 1.33
VARS-220ENST00000461874 OS9Q13438 667 aaPredicted RBP23.34■■□□□ 1.33
VARS-220ENST00000461874 PI16Q6UXB8 463 aa23.34■■□□□ 1.33
VARS-220ENST00000461874 ZFPM1Q8IX07 1006 aa23.34■■□□□ 1.33
VARS-220ENST00000461874 NOP58Q9Y2X3 529 aaKnown RBP23.34■■□□□ 1.33
VARS-220ENST00000461874 CCL15-CCL14A0A0B4J2E2 113 aa23.33■■□□□ 1.33
VARS-220ENST00000461874 UQCRFS1P1P0C7P4 283 aa23.33■■□□□ 1.33
VARS-220ENST00000461874 MECOMQ03112 1051 aa23.33■■□□□ 1.33
VARS-220ENST00000461874 CCL15Q16663 113 aa23.33■■□□□ 1.33
VARS-220ENST00000461874 TNNI3KQ59H18 835 aa23.33■■□□□ 1.33
VARS-220ENST00000461874 PANK1Q8TE04 598 aa23.33■■□□□ 1.33
VARS-220ENST00000461874 ZNF384Q8TF68 577 aa23.33■■□□□ 1.33
VARS-220ENST00000461874 ZNF112Q9UJU3 913 aa23.33■■□□□ 1.33
VARS-220ENST00000461874 FPGT-TNNI3KV9GXZ4 949 aa23.33■■□□□ 1.33
VARS-220ENST00000461874 MROH7-TTC4A0A0A0MT08 1334 aa23.33■■□□□ 1.32
VARS-220ENST00000461874 ENTPD3O75355 529 aa23.32■■□□□ 1.32
VARS-220ENST00000461874 INPP5BP32019 993 aa23.32■■□□□ 1.32
VARS-220ENST00000461874 MCAMP43121 646 aa23.32■■□□□ 1.32
VARS-220ENST00000461874 BTDP43251 543 aa23.32■■□□□ 1.32
VARS-220ENST00000461874 RGS3P49796 1198 aa23.32■■□□□ 1.32
VARS-220ENST00000461874 TBC1D9Q6ZT07 1266 aa23.32■■□□□ 1.32
VARS-220ENST00000461874 HPS5Q9UPZ3 1129 aa23.32■■□□□ 1.32
VARS-220ENST00000461874 GPR75-ASB3A0A0A6YYF3 556 aa23.31■■□□□ 1.32
VARS-220ENST00000461874 PPIL2Q13356 520 aa23.31■■□□□ 1.32
VARS-220ENST00000461874 RFX7Q2KHR2 1363 aa23.3■■□□□ 1.32
VARS-220ENST00000461874 IRF6O14896 467 aa23.3■■□□□ 1.32
VARS-220ENST00000461874 WDHD1O75717 1129 aaPredicted RBP23.3■■□□□ 1.32
VARS-220ENST00000461874 PPATQ06203 517 aa23.3■■□□□ 1.32
VARS-220ENST00000461874 CEP85Q6P2H3 762 aa23.3■■□□□ 1.32
VARS-220ENST00000461874 NSUN4Q96CB9 384 aaKnown RBP23.3■■□□□ 1.32
VARS-220ENST00000461874 DBNDD2Q9BQY9 259 aa23.3■■□□□ 1.32
VARS-220ENST00000461874 MYH2Q9UKX2 1941 aa23.29■■□□□ 1.32
VARS-220ENST00000461874 LDHCP07864 332 aa23.29■■□□□ 1.32
VARS-220ENST00000461874 CETPP11597 493 aa23.29■■□□□ 1.32
VARS-220ENST00000461874 MS4A1P11836 297 aa23.29■■□□□ 1.32
VARS-220ENST00000461874 RHBDL3P58872 404 aa23.29■■□□□ 1.32
VARS-220ENST00000461874 GSTO1P78417 241 aa23.29■■□□□ 1.32
VARS-220ENST00000461874 SNAPC2Q13487 334 aa23.29■■□□□ 1.32
VARS-220ENST00000461874 FBXO46Q6PJ61 603 aaPredicted RBP23.29■■□□□ 1.32
VARS-220ENST00000461874 FAM43AQ8N2R8 423 aa23.29■■□□□ 1.32
VARS-220ENST00000461874 DDX4Q9NQI0 724 aaKnown RBP23.29■■□□□ 1.32
VARS-220ENST00000461874 RAI14Q9P0K7 980 aa23.29■■□□□ 1.32
VARS-220ENST00000461874 ATRNL1Q5VV63 1379 aa23.28■■□□□ 1.32
VARS-220ENST00000461874 MLLT1Q03111 559 aaPredicted RBP23.28■■□□□ 1.32
VARS-220ENST00000461874 CCDC158Q5M9N0 1113 aa23.28■■□□□ 1.32
VARS-220ENST00000461874 TTC39AQ5SRH9 613 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms