RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 FAM83AQ86UY5 434 aa21.5■■□□□ 1.03
MRPL28-207ENST00000461550 ZGPATQ8N5A5 531 aaKnown RBP21.5■■□□□ 1.03
MRPL28-207ENST00000461550 COG6Q9Y2V7 657 aa21.5■■□□□ 1.03
MRPL28-207ENST00000461550 FPGT-TNNI3KV9GXZ4 949 aa21.5■■□□□ 1.03
MRPL28-207ENST00000461550 PDS5AQ29RF7 1337 aaKnown RBP21.49■■□□□ 1.03
MRPL28-207ENST00000461550 ZBTB22O15209 634 aa21.49■■□□□ 1.03
MRPL28-207ENST00000461550 SREBF2Q12772 1141 aa21.49■■□□□ 1.03
MRPL28-207ENST00000461550 FKBP1CQ5VVH2 108 aa21.49■■□□□ 1.03
MRPL28-207ENST00000461550 TBC1D9Q6ZT07 1266 aa21.49■■□□□ 1.03
MRPL28-207ENST00000461550 USP40Q9NVE5 1235 aa21.49■■□□□ 1.03
MRPL28-207ENST00000461550 LAMB1P07942 1786 aa21.48■■□□□ 1.03
MRPL28-207ENST00000461550 ARID4AP29374 1257 aaPredicted RBP21.48■■□□□ 1.03
MRPL28-207ENST00000461550 MCAMP43121 646 aa21.48■■□□□ 1.03
MRPL28-207ENST00000461550 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.48■■□□□ 1.03
MRPL28-207ENST00000461550 SPATA5Q8NB90 893 aa21.48■■□□□ 1.03
MRPL28-207ENST00000461550 CNKSR2Q8WXI2 1034 aa21.48■■□□□ 1.03
MRPL28-207ENST00000461550 ABHD8Q96I13 439 aa21.48■■□□□ 1.03
MRPL28-207ENST00000461550 DBNDD2Q9BQY9 259 aa21.48■■□□□ 1.03
MRPL28-207ENST00000461550 ZBTB48P10074 688 aaPredicted RBP21.47■■□□□ 1.03
MRPL28-207ENST00000461550 VGLL4Q14135 290 aa21.47■■□□□ 1.03
MRPL28-207ENST00000461550 NOP58Q9Y2X3 529 aaKnown RBP21.47■■□□□ 1.03
MRPL28-207ENST00000461550 RPAP1Q9BWH6 1393 aaPredicted RBP21.47■■□□□ 1.03
MRPL28-207ENST00000461550 UNCXA6NJT0 531 aa21.46■■□□□ 1.03
MRPL28-207ENST00000461550 MS4A1P11836 297 aa21.46■■□□□ 1.03
MRPL28-207ENST00000461550 MECOMQ03112 1051 aa21.46■■□□□ 1.03
MRPL28-207ENST00000461550 SPTY2D1Q68D10 685 aaPredicted RBP21.46■■□□□ 1.03
MRPL28-207ENST00000461550 ERICH6Q7L0X2 663 aa21.46■■□□□ 1.03
MRPL28-207ENST00000461550 MIGA2Q7L4E1 593 aa21.46■■□□□ 1.03
MRPL28-207ENST00000461550 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.46■■□□□ 1.034e-8■■□□□ 12.7
MRPL28-207ENST00000461550 ZNF384Q8TF68 577 aa21.46■■□□□ 1.03
MRPL28-207ENST00000461550 OPTNQ96CV9 577 aa21.46■■□□□ 1.03
MRPL28-207ENST00000461550 MCOLN1Q9GZU1 580 aa21.46■■□□□ 1.03
MRPL28-207ENST00000461550 GPR108Q9NPR9 543 aa21.46■■□□□ 1.03
MRPL28-207ENST00000461550 SNRKQ9NRH2 765 aa21.46■■□□□ 1.03
MRPL28-207ENST00000461550 FAM198AQ9UFP1 575 aa21.46■■□□□ 1.03
MRPL28-207ENST00000461550 EXOC6BQ9Y2D4 811 aa21.46■■□□□ 1.03
MRPL28-207ENST00000461550 GAKO14976 1311 aa21.46■■□□□ 1.03
MRPL28-207ENST00000461550 MANSC4A6NHS7 340 aaPredicted RBP21.45■■□□□ 1.03
MRPL28-207ENST00000461550 MAP3K9P80192 1104 aa21.45■■□□□ 1.03
MRPL28-207ENST00000461550 DGKZQ13574 1117 aa21.45■■□□□ 1.03
MRPL28-207ENST00000461550 TTC39AQ5SRH9 613 aa21.45■■□□□ 1.03
MRPL28-207ENST00000461550 ZFPM1Q8IX07 1006 aa21.45■■□□□ 1.03
MRPL28-207ENST00000461550 FAM151AQ8WW52 585 aa21.45■■□□□ 1.03
MRPL28-207ENST00000461550 TLR7Q9NYK1 1049 aaKnown RBP21.45■■□□□ 1.03
MRPL28-207ENST00000461550 WRNIP1Q96S55 665 aa21.45■■□□□ 1.02
MRPL28-207ENST00000461550 R3HDMLQ9H3Y0 253 aa21.45■■□□□ 1.02
MRPL28-207ENST00000461550 CSADQ9Y600 493 aa21.45■■□□□ 1.02
MRPL28-207ENST00000461550 MROH7-TTC4A0A0A0MT08 1334 aa21.44■■□□□ 1.02
MRPL28-207ENST00000461550 MYO5AQ9Y4I1 1855 aaKnown RBP21.44■■□□□ 1.02
MRPL28-207ENST00000461550 IGF2BP3O00425 579 aaKnown RBP eCLIP21.44■■□□□ 1.02
MRPL28-207ENST00000461550 UQCRFS1P1P0C7P4 283 aa21.44■■□□□ 1.02
MRPL28-207ENST00000461550 BTDP43251 543 aa21.44■■□□□ 1.02
MRPL28-207ENST00000461550 C20orf194Q5TEA3 1177 aa21.44■■□□□ 1.02
MRPL28-207ENST00000461550 ZKSCAN4Q969J2 545 aaPredicted RBP21.44■■□□□ 1.02
MRPL28-207ENST00000461550 CCDC8Q9H0W5 538 aaPredicted RBP21.44■■□□□ 1.02
MRPL28-207ENST00000461550 DBNLQ9UJU6 430 aaKnown RBP21.44■■□□□ 1.02
MRPL28-207ENST00000461550 DOCK2Q92608 1830 aa21.43■■□□□ 1.02
MRPL28-207ENST00000461550 RGS3P49796 1198 aa21.43■■□□□ 1.02
MRPL28-207ENST00000461550 IFNL1Q8IU54 200 aa21.43■■□□□ 1.02
MRPL28-207ENST00000461550 OTUD5Q96G74 571 aa21.43■■□□□ 1.02
MRPL28-207ENST00000461550 RAI14Q9P0K7 980 aa21.43■■□□□ 1.02
MRPL28-207ENST00000461550 DDX19BQ9UMR2 479 aa21.43■■□□□ 1.02
MRPL28-207ENST00000461550 CCDC158Q5M9N0 1113 aa21.42■■□□□ 1.02
MRPL28-207ENST00000461550 SLF2Q8IX21 1173 aa21.42■■□□□ 1.02
MRPL28-207ENST00000461550 ZNF296Q8WUU4 475 aaPredicted RBP21.42■■□□□ 1.02
MRPL28-207ENST00000461550 EAF2Q96CJ1 260 aaPredicted RBP21.42■■□□□ 1.02
MRPL28-207ENST00000461550 HOOK2Q96ED9 719 aa21.42■■□□□ 1.02
MRPL28-207ENST00000461550 ZBTB40Q9NUA8 1239 aa21.42■■□□□ 1.02
MRPL28-207ENST00000461550 SNCAIPQ9Y6H5 919 aa21.42■■□□□ 1.02
MRPL28-207ENST00000461550 RFX7Q2KHR2 1363 aa21.42■■□□□ 1.02
MRPL28-207ENST00000461550 DCAF15Q66K64 600 aa21.41■■□□□ 1.02
MRPL28-207ENST00000461550 NSUN4Q96CB9 384 aaKnown RBP21.41■■□□□ 1.02
MRPL28-207ENST00000461550 FAM163AQ96GL9 167 aaPredicted RBP21.41■■□□□ 1.02
MRPL28-207ENST00000461550 LRP2BPQ9P2M1 347 aa21.41■■□□□ 1.02
MRPL28-207ENST00000461550 MAST2Q6P0Q8 1798 aa21.4■■□□□ 1.02
MRPL28-207ENST00000461550 APBB1O00213 710 aa21.4■■□□□ 1.02
MRPL28-207ENST00000461550 INPP5BP32019 993 aa21.4■■□□□ 1.02
MRPL28-207ENST00000461550 INHBEP58166 350 aa21.4■■□□□ 1.02
MRPL28-207ENST00000461550 PICALMQ13492 652 aa21.4■■□□□ 1.02
MRPL28-207ENST00000461550 ZNF341Q9BYN7 854 aa21.4■■□□□ 1.02
MRPL28-207ENST00000461550 DDX4Q9NQI0 724 aaKnown RBP21.4■■□□□ 1.02
MRPL28-207ENST00000461550 GPR25O00155 361 aa21.39■■□□□ 1.02
MRPL28-207ENST00000461550 WDHD1O75717 1129 aaPredicted RBP21.39■■□□□ 1.02
MRPL28-207ENST00000461550 SIRT2Q8IXJ6 389 aa21.39■■□□□ 1.02
MRPL28-207ENST00000461550 MS4A4AQ96JQ5 239 aa21.39■■□□□ 1.02
MRPL28-207ENST00000461550 PTPN18Q99952 460 aa21.39■■□□□ 1.02
MRPL28-207ENST00000461550 IDI2Q9BXS1 227 aa21.39■■□□□ 1.02
MRPL28-207ENST00000461550 BCL11AQ9H165 835 aa21.39■■□□□ 1.02
MRPL28-207ENST00000461550 IL1RAPL2Q9NP60 686 aa21.39■■□□□ 1.02
MRPL28-207ENST00000461550 GPR75-ASB3A0A0A6YYF3 556 aa21.39■■□□□ 1.01
MRPL28-207ENST00000461550 SPDYE5A6NIY4 337 aa21.39■■□□□ 1.01
MRPL28-207ENST00000461550 CCDC85CA6NKD9 419 aa21.39■■□□□ 1.01
MRPL28-207ENST00000461550 SLURP2P0DP57 97 aa21.39■■□□□ 1.01
MRPL28-207ENST00000461550 ZAP70P43403 619 aa21.39■■□□□ 1.01
MRPL28-207ENST00000461550 RHBDL3P58872 404 aa21.39■■□□□ 1.01
MRPL28-207ENST00000461550 SH3BP5LQ7L8J4 393 aa21.39■■□□□ 1.01
MRPL28-207ENST00000461550 ZSCAN29Q8IWY8 852 aaPredicted RBP21.39■■□□□ 1.01
MRPL28-207ENST00000461550 ALDH1A1P00352 501 aa21.38■■□□□ 1.01
MRPL28-207ENST00000461550 CYP2E1P05181 493 aaPredicted RBP21.38■■□□□ 1.01
MRPL28-207ENST00000461550 GSTO1P78417 241 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms