RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 FZD6O60353 706 aa7.14□□□□□ -1.27
VPS41-209ENST00000457055 TIAF1O95411 115 aa7.14□□□□□ -1.27
VPS41-209ENST00000457055 WNT11O96014 354 aa7.14□□□□□ -1.27
VPS41-209ENST00000457055 ESRRAP11474 423 aaPredicted RBP7.14□□□□□ -1.27
VPS41-209ENST00000457055 TAL1P17542 331 aaPredicted RBP7.14□□□□□ -1.27
VPS41-209ENST00000457055 GORABQ5T7V8 394 aa7.14□□□□□ -1.27
VPS41-209ENST00000457055 PEAR1Q5VY43 1037 aaPredicted RBP7.14□□□□□ -1.27
VPS41-209ENST00000457055 KRTAP19-1Q8IUB9 90 aa7.14□□□□□ -1.27
VPS41-209ENST00000457055 FBXL6Q8N531 539 aa7.14□□□□□ -1.27
VPS41-209ENST00000457055 GIMAP7Q8NHV1 300 aa7.14□□□□□ -1.27
VPS41-209ENST00000457055 KIF13AQ9H1H9 1805 aa7.14□□□□□ -1.27
VPS41-209ENST00000457055 SUGCTQ9HAC7 445 aa7.14□□□□□ -1.27
VPS41-209ENST00000457055 LMTK3Q96Q04 1460 aa7.13□□□□□ -1.27
VPS41-209ENST00000457055 HMGB1P1B2RPK0 211 aaPredicted RBP7.13□□□□□ -1.27
VPS41-209ENST00000457055 MARCH6O60337 910 aa7.13□□□□□ -1.27
VPS41-209ENST00000457055 PPP1R15AO75807 674 aaPredicted RBP7.13□□□□□ -1.27
VPS41-209ENST00000457055 BRD1O95696 1058 aa7.13□□□□□ -1.27
VPS41-209ENST00000457055 DLGAP3O95886 979 aa7.13□□□□□ -1.27
VPS41-209ENST00000457055 ABL1P00519 1130 aa7.13□□□□□ -1.27
VPS41-209ENST00000457055 FAM193AP78312 1265 aa7.13□□□□□ -1.27
VPS41-209ENST00000457055 GSTM4Q03013 218 aa7.13□□□□□ -1.27
VPS41-209ENST00000457055 SF3B2Q13435 895 aaKnown RBP7.13□□□□□ -1.27
VPS41-209ENST00000457055 GJD3Q8N144 294 aa7.13□□□□□ -1.27
VPS41-209ENST00000457055 RETREG2Q8NC44 543 aa7.13□□□□□ -1.27
VPS41-209ENST00000457055 ATG3Q9NT62 314 aa7.13□□□□□ -1.27
VPS41-209ENST00000457055 PIM2Q9P1W9 311 aa7.13□□□□□ -1.27
VPS41-209ENST00000457055 FAM95CA0A1B0GW59 222 aa7.12□□□□□ -1.27
VPS41-209ENST00000457055 METTL12A8MUP2 240 aa7.12□□□□□ -1.27
VPS41-209ENST00000457055 HOXA10P31260 410 aaPredicted RBP7.12□□□□□ -1.27
VPS41-209ENST00000457055 TXKP42681 527 aa7.12□□□□□ -1.27
VPS41-209ENST00000457055 FKBP4Q02790 459 aaKnown RBP eCLIP7.12□□□□□ -1.27
VPS41-209ENST00000457055 ZNF211Q13398 564 aaPredicted RBP7.12□□□□□ -1.27
VPS41-209ENST00000457055 FBXO41Q8TF61 875 aa7.12□□□□□ -1.27
VPS41-209ENST00000457055 ANO2Q9NQ90 1003 aa7.12□□□□□ -1.27
VPS41-209ENST00000457055 CCDC87Q9NVE4 849 aa7.12□□□□□ -1.27
VPS41-209ENST00000457055 LEMD3Q9Y2U8 911 aa7.12□□□□□ -1.27
VPS41-209ENST00000457055 RSF1Q96T23 1441 aaPredicted RBP7.11□□□□□ -1.27
VPS41-209ENST00000457055 PATL2C9JE40 543 aaKnown RBP7.11□□□□□ -1.27
VPS41-209ENST00000457055 TPD52L2O43399 206 aaKnown RBP7.11□□□□□ -1.27
VPS41-209ENST00000457055 F13BP05160 661 aa7.11□□□□□ -1.27
VPS41-209ENST00000457055 POLR3DP05423 398 aaPredicted RBP7.11□□□□□ -1.27
VPS41-209ENST00000457055 DRD2P14416 443 aa7.11□□□□□ -1.27
VPS41-209ENST00000457055 USP11P51784 963 aa7.11□□□□□ -1.27
VPS41-209ENST00000457055 NFKBIBQ15653 356 aa7.11□□□□□ -1.27
VPS41-209ENST00000457055 EXOSC6Q5RKV6 272 aaKnown RBP7.11□□□□□ -1.27
VPS41-209ENST00000457055 PAOXQ6QHF9 649 aa7.11□□□□□ -1.27
VPS41-209ENST00000457055 OSBPL1AQ9BXW6 950 aa7.11□□□□□ -1.27
VPS41-209ENST00000457055 ZFYVE28Q9HCC9 887 aa7.11□□□□□ -1.27
VPS41-209ENST00000457055 PEG3Q9GZU2 1588 aa7.11□□□□□ -1.27
VPS41-209ENST00000457055 AQRO60306 1485 aaKnown RBP eCLIP7.11□□□□□ -1.27
VPS41-209ENST00000457055 CPSF6Q16630 551 aaKnown RBP eCLIP7.1□□□□□ -1.27
VPS41-209ENST00000457055 PHLDB3Q6NSJ2 640 aa7.1□□□□□ -1.27
VPS41-209ENST00000457055 CDPF1Q6NVV7 123 aa7.1□□□□□ -1.27
VPS41-209ENST00000457055 FBLIM1Q8WUP2 373 aa7.1□□□□□ -1.27
VPS41-209ENST00000457055 FMNL2Q96PY5 1086 aa7.1□□□□□ -1.27
VPS41-209ENST00000457055 EIF4G3O43432 1585 aaKnown RBP7.1□□□□□ -1.27
VPS41-209ENST00000457055 MROH2BQ7Z745 1585 aa7.09□□□□□ -1.27
VPS41-209ENST00000457055 CARNS1A5YM72 827 aa7.09□□□□□ -1.27
VPS41-209ENST00000457055 ANKRD62A6NC57 917 aa7.09□□□□□ -1.27
VPS41-209ENST00000457055 CLGNO14967 610 aa7.09□□□□□ -1.27
VPS41-209ENST00000457055 EIF4EBP3O60516 100 aaPredicted RBP7.09□□□□□ -1.27
VPS41-209ENST00000457055 FOSL1P15407 271 aa7.09□□□□□ -1.27
VPS41-209ENST00000457055 FAM9BQ8IZU0 186 aa7.09□□□□□ -1.27
VPS41-209ENST00000457055 C2CD4AQ8NCU7 369 aaPredicted RBP7.09□□□□□ -1.27
VPS41-209ENST00000457055 YIPF2Q9BWQ6 316 aa7.09□□□□□ -1.27
VPS41-209ENST00000457055 ANGEL1Q9UNK9 670 aaKnown RBP7.09□□□□□ -1.27
VPS41-209ENST00000457055 HECW2Q9P2P5 1572 aa7.08□□□□□ -1.28
VPS41-209ENST00000457055 A0A096LPE4 126 aa7.08□□□□□ -1.28
VPS41-209ENST00000457055 A0A1W2PPZ6 126 aa7.08□□□□□ -1.28
VPS41-209ENST00000457055 SOX4Q06945 474 aaPredicted RBP7.08□□□□□ -1.28
VPS41-209ENST00000457055 PCDH1Q08174 1060 aa7.08□□□□□ -1.28
VPS41-209ENST00000457055 METTL22Q9BUU2 404 aaPredicted RBP7.08□□□□□ -1.28
VPS41-209ENST00000457055 NRSN2Q9GZP1 204 aa7.08□□□□□ -1.28
VPS41-209ENST00000457055 CLEC4MQ9H2X3 399 aaPredicted RBP7.08□□□□□ -1.28
VPS41-209ENST00000457055 RNF114Q9Y508 228 aa7.08□□□□□ -1.28
VPS41-209ENST00000457055 A0A1W2PP55 124 aa7.07□□□□□ -1.28
VPS41-209ENST00000457055 BTBD11A6QL63 1104 aa7.07□□□□□ -1.28
VPS41-209ENST00000457055 ADH5P11766 374 aa7.07□□□□□ -1.28
VPS41-209ENST00000457055 MSMPQ1L6U9 139 aa7.07□□□□□ -1.28
VPS41-209ENST00000457055 CCNJLQ8IV13 435 aa7.07□□□□□ -1.28
VPS41-209ENST00000457055 SHISA5Q8N114 240 aa7.07□□□□□ -1.28
VPS41-209ENST00000457055 ZNF622Q969S3 477 aaKnown RBP eCLIP7.07□□□□□ -1.285e-7■■□□□ 14.4
VPS41-209ENST00000457055 TBC1D32Q96NH3 1257 aa7.07□□□□□ -1.28
VPS41-209ENST00000457055 LIN7BQ9HAP6 207 aa7.07□□□□□ -1.28
VPS41-209ENST00000457055 TERF2IPQ9NYB0 399 aa7.07□□□□□ -1.28
VPS41-209ENST00000457055 KCNG1Q9UIX4 513 aa7.07□□□□□ -1.28
VPS41-209ENST00000457055 ERCC3P19447 782 aa7.06□□□□□ -1.28
VPS41-209ENST00000457055 MAOBP27338 520 aa7.06□□□□□ -1.28
VPS41-209ENST00000457055 GRIA4P48058 902 aa7.06□□□□□ -1.28
VPS41-209ENST00000457055 ZNF423Q2M1K9 1284 aa7.06□□□□□ -1.28
VPS41-209ENST00000457055 HP1BP3Q5SSJ5 553 aaPredicted RBP7.06□□□□□ -1.28
VPS41-209ENST00000457055 ZAR1Q86SH2 424 aa7.06□□□□□ -1.28
VPS41-209ENST00000457055 GALNT12Q8IXK2 581 aa7.06□□□□□ -1.28
VPS41-209ENST00000457055 ABI1Q8IZP0 508 aa7.06□□□□□ -1.28
VPS41-209ENST00000457055 PRKAG2Q9UGJ0 569 aa7.06□□□□□ -1.28
VPS41-209ENST00000457055 ADGRE2Q9UHX3 823 aa7.06□□□□□ -1.28
VPS41-209ENST00000457055 IFT140Q96RY7 1462 aa7.05□□□□□ -1.28
VPS41-209ENST00000457055 TSPOAP1O95153 1857 aa7.05□□□□□ -1.28
VPS41-209ENST00000457055 ERCC6L2Q5T890 1561 aa7.05□□□□□ -1.28
VPS41-209ENST00000457055 CYP11A1P05108 521 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms