RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 IREB2P48200 963 aaKnown RBP22.12■■□□□ 1.13
PDLIM2-215ENST00000456545 TMEM39BQ9GZU3 492 aa22.12■■□□□ 1.13
PDLIM2-215ENST00000456545 MECOMQ03112 1051 aa22.11■■□□□ 1.13
PDLIM2-215ENST00000456545 FKBP1CQ5VVH2 108 aa22.11■■□□□ 1.13
PDLIM2-215ENST00000456545 CDC42EP5Q6NZY7 148 aa22.11■■□□□ 1.13
PDLIM2-215ENST00000456545 SLC10A4Q96EP9 437 aa22.11■■□□□ 1.13
PDLIM2-215ENST00000456545 ZNF512BQ96KM6 892 aaPredicted RBP22.11■■□□□ 1.13
PDLIM2-215ENST00000456545 TLR7Q9NYK1 1049 aaKnown RBP22.11■■□□□ 1.13
PDLIM2-215ENST00000456545 FZD1Q9UP38 647 aa22.11■■□□□ 1.13
PDLIM2-215ENST00000456545 FAM155AB1AL88 458 aaPredicted RBP22.1■■□□□ 1.13
PDLIM2-215ENST00000456545 SLC10A3P09131 477 aa22.1■■□□□ 1.13
PDLIM2-215ENST00000456545 KIF23Q02241 960 aaPredicted RBP22.1■■□□□ 1.13
PDLIM2-215ENST00000456545 FAM83AQ86UY5 434 aa22.1■■□□□ 1.13
PDLIM2-215ENST00000456545 HOOK2Q96ED9 719 aa22.1■■□□□ 1.13
PDLIM2-215ENST00000456545 NOL10Q9BSC4 688 aaKnown RBP22.1■■□□□ 1.13
PDLIM2-215ENST00000456545 MYH2Q9UKX2 1941 aa22.1■■□□□ 1.13
PDLIM2-215ENST00000456545 FOXN1O15353 648 aa22.09■■□□□ 1.13
PDLIM2-215ENST00000456545 CTCFP49711 727 aaPredicted RBP22.09■■□□□ 1.13
PDLIM2-215ENST00000456545 TCP10Q12799 353 aa22.09■■□□□ 1.13
PDLIM2-215ENST00000456545 RASAL3Q86YV0 1011 aa22.09■■□□□ 1.13
PDLIM2-215ENST00000456545 USP2O75604 605 aaPredicted RBP22.08■■□□□ 1.13
PDLIM2-215ENST00000456545 BTDP43251 543 aa22.08■■□□□ 1.13
PDLIM2-215ENST00000456545 ZAP70P43403 619 aa22.08■■□□□ 1.13
PDLIM2-215ENST00000456545 FAM163AQ96GL9 167 aaPredicted RBP22.08■■□□□ 1.13
PDLIM2-215ENST00000456545 MROH7-TTC4A0A0A0MT08 1334 aa22.07■■□□□ 1.12
PDLIM2-215ENST00000456545 LDLRAD1Q5T700 205 aa22.07■■□□□ 1.12
PDLIM2-215ENST00000456545 NAA16Q6N069 864 aaPredicted RBP22.07■■□□□ 1.12
PDLIM2-215ENST00000456545 FAM151AQ8WW52 585 aa22.07■■□□□ 1.12
PDLIM2-215ENST00000456545 NSUN4Q96CB9 384 aaKnown RBP22.07■■□□□ 1.12
PDLIM2-215ENST00000456545 TEPSINQ96N21 525 aa22.07■■□□□ 1.12
PDLIM2-215ENST00000456545 CRBNQ96SW2 442 aa22.07■■□□□ 1.12
PDLIM2-215ENST00000456545 ZIC5Q96T25 663 aa22.07■■□□□ 1.12
PDLIM2-215ENST00000456545 LRRCC1Q9C099 1032 aa22.07■■□□□ 1.12
PDLIM2-215ENST00000456545 GAKO14976 1311 aa22.06■■□□□ 1.12
PDLIM2-215ENST00000456545 AK9Q5TCS8 1911 aa22.06■■□□□ 1.12
PDLIM2-215ENST00000456545 CYP2E1P05181 493 aaPredicted RBP22.06■■□□□ 1.12
PDLIM2-215ENST00000456545 MKRN3Q13064 507 aaKnown RBP22.06■■□□□ 1.12
PDLIM2-215ENST00000456545 MAP3K11Q16584 847 aa22.06■■□□□ 1.12
PDLIM2-215ENST00000456545 REM2Q8IYK8 340 aaPredicted RBP22.06■■□□□ 1.12
PDLIM2-215ENST00000456545 ANKRD13AQ8IZ07 590 aa22.06■■□□□ 1.12
PDLIM2-215ENST00000456545 UNCXA6NJT0 531 aa22.05■■□□□ 1.12
PDLIM2-215ENST00000456545 DCAF15Q66K64 600 aa22.05■■□□□ 1.12
PDLIM2-215ENST00000456545 ZSCAN29Q8IWY8 852 aaPredicted RBP22.05■■□□□ 1.12
PDLIM2-215ENST00000456545 GPR75-ASB3A0A0A6YYF3 556 aa22.04■■□□□ 1.12
PDLIM2-215ENST00000456545 CA12O43570 354 aa22.04■■□□□ 1.12
PDLIM2-215ENST00000456545 IDH1O75874 414 aaKnown RBP22.04■■□□□ 1.12
PDLIM2-215ENST00000456545 BAG3O95817 575 aa22.04■■□□□ 1.12
PDLIM2-215ENST00000456545 CDAN1Q8IWY9 1227 aa22.04■■□□□ 1.12
PDLIM2-215ENST00000456545 RGS3P49796 1198 aa22.03■■□□□ 1.12
PDLIM2-215ENST00000456545 LBX1P52954 281 aa22.03■■□□□ 1.12
PDLIM2-215ENST00000456545 MAP3K9P80192 1104 aa22.03■■□□□ 1.12
PDLIM2-215ENST00000456545 NFIAQ12857 509 aa22.03■■□□□ 1.12
PDLIM2-215ENST00000456545 PICALMQ13492 652 aa22.03■■□□□ 1.12
PDLIM2-215ENST00000456545 CSRNP1Q96S65 589 aa22.03■■□□□ 1.12
PDLIM2-215ENST00000456545 CSADQ9Y600 493 aa22.03■■□□□ 1.12
PDLIM2-215ENST00000456545 SSC5DA1L4H1 1573 aa22.03■■□□□ 1.12
PDLIM2-215ENST00000456545 IGSF3O75054 1194 aa22.02■■□□□ 1.12
PDLIM2-215ENST00000456545 ENTPD3O75355 529 aa22.02■■□□□ 1.12
PDLIM2-215ENST00000456545 MAP4K4O95819 1239 aaPredicted RBP22.02■■□□□ 1.12
PDLIM2-215ENST00000456545 TTF1Q15361 905 aaPredicted RBP22.02■■□□□ 1.12
PDLIM2-215ENST00000456545 MIGA2Q7L4E1 593 aa22.02■■□□□ 1.12
PDLIM2-215ENST00000456545 CLMNQ96JQ2 1002 aa22.02■■□□□ 1.12
PDLIM2-215ENST00000456545 IDI2Q9BXS1 227 aa22.02■■□□□ 1.12
PDLIM2-215ENST00000456545 DCTPP1Q9H773 170 aa22.02■■□□□ 1.12
PDLIM2-215ENST00000456545 PIH1D3Q9NQM4 214 aaKnown RBP22.02■■□□□ 1.12
PDLIM2-215ENST00000456545 ZBTB47Q9UFB7 747 aaPredicted RBP22.02■■□□□ 1.12
PDLIM2-215ENST00000456545 FAM198AQ9UFP1 575 aa22.02■■□□□ 1.12
PDLIM2-215ENST00000456545 NDUFB9Q9Y6M9 179 aa22.02■■□□□ 1.12
PDLIM2-215ENST00000456545 THSD7BQ9C0I4 1608 aa22.02■■□□□ 1.11
PDLIM2-215ENST00000456545 SMARCA5O60264 1052 aaPredicted RBP22.01■■□□□ 1.11
PDLIM2-215ENST00000456545 MAP3K12Q12852 859 aa22.01■■□□□ 1.11
PDLIM2-215ENST00000456545 SPRYD7Q5W111 196 aa22.01■■□□□ 1.11
PDLIM2-215ENST00000456545 ZNF384Q8TF68 577 aa22.01■■□□□ 1.11
PDLIM2-215ENST00000456545 DNAJC2Q99543 621 aaKnown RBP22.01■■□□□ 1.11
PDLIM2-215ENST00000456545 ZNF341Q9BYN7 854 aa22.01■■□□□ 1.11
PDLIM2-215ENST00000456545 TSKSQ9UJT2 592 aa22.01■■□□□ 1.11
PDLIM2-215ENST00000456545 PCDHB15Q9Y5E8 787 aa22.01■■□□□ 1.11
PDLIM2-215ENST00000456545 AKAP11Q9UKA4 1901 aa22.01■■□□□ 1.11
PDLIM2-215ENST00000456545 HSPA8P11142 646 aaKnown RBP22■■□□□ 1.11
PDLIM2-215ENST00000456545 PLCG2P16885 1265 aa22■■□□□ 1.11
PDLIM2-215ENST00000456545 CYP7A1P22680 504 aa22■■□□□ 1.11
PDLIM2-215ENST00000456545 SREBF2Q12772 1141 aa22■■□□□ 1.11
PDLIM2-215ENST00000456545 ELP3Q9H9T3 547 aa22■■□□□ 1.11
PDLIM2-215ENST00000456545 AATFQ9NY61 560 aaKnown RBP eCLIP22■■□□□ 1.11
PDLIM2-215ENST00000456545 TRPA1O75762 1119 aa21.99■■□□□ 1.11
PDLIM2-215ENST00000456545 COL13A1Q5TAT6 717 aaPredicted RBP21.99■■□□□ 1.11
PDLIM2-215ENST00000456545 ZFPM1Q8IX07 1006 aa21.99■■□□□ 1.11
PDLIM2-215ENST00000456545 TEX11Q8IYF3 940 aa21.99■■□□□ 1.11
PDLIM2-215ENST00000456545 WNK4Q96J92 1243 aa21.99■■□□□ 1.11
PDLIM2-215ENST00000456545 WRNIP1Q96S55 665 aa21.99■■□□□ 1.11
PDLIM2-215ENST00000456545 PRDM10Q9NQV6 1147 aa21.99■■□□□ 1.11
PDLIM2-215ENST00000456545 SUPT16HQ9Y5B9 1047 aaKnown RBP21.99■■□□□ 1.11
PDLIM2-215ENST00000456545 RPAP1Q9BWH6 1393 aaPredicted RBP21.99■■□□□ 1.11
PDLIM2-215ENST00000456545 WDHD1O75717 1129 aaPredicted RBP21.98■■□□□ 1.11
PDLIM2-215ENST00000456545 ZBTB48P10074 688 aaPredicted RBP21.98■■□□□ 1.11
PDLIM2-215ENST00000456545 MAGEB6Q8N7X4 407 aa21.98■■□□□ 1.11
PDLIM2-215ENST00000456545 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.98■■□□□ 1.11
PDLIM2-215ENST00000456545 GPATCH3Q96I76 525 aa21.98■■□□□ 1.11
PDLIM2-215ENST00000456545 BOLA2Q9H3K6 86 aa21.98■■□□□ 1.11
PDLIM2-215ENST00000456545 ANTXR1Q9H6X2 564 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms