RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 CLIP2Q9UDT6 1046 aa11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 ATP6V0A2Q9Y487 856 aa11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 CCDC88AQ3V6T2 1871 aa11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 IRS4O14654 1257 aaPredicted RBP11.69□□□□□ -0.54
CHCHD4P3-201ENST00000455954 MAP4K4O95819 1239 aaPredicted RBP11.69□□□□□ -0.54
CHCHD4P3-201ENST00000455954 IARSP41252 1262 aaKnown RBP11.69□□□□□ -0.54
CHCHD4P3-201ENST00000455954 NEXNQ0ZGT2 675 aa11.69□□□□□ -0.54
CHCHD4P3-201ENST00000455954 IQCB1Q15051 598 aa11.69□□□□□ -0.54
CHCHD4P3-201ENST00000455954 SP8Q8IXZ3 490 aa11.69□□□□□ -0.54
CHCHD4P3-201ENST00000455954 KIF18AQ8NI77 898 aa11.69□□□□□ -0.54
CHCHD4P3-201ENST00000455954 JARID2Q92833 1246 aaPredicted RBP11.69□□□□□ -0.54
CHCHD4P3-201ENST00000455954 ARID3AQ99856 593 aa11.69□□□□□ -0.54
CHCHD4P3-201ENST00000455954 SPEF2Q9C093 1822 aa11.69□□□□□ -0.54
CHCHD4P3-201ENST00000455954 TIAM2Q8IVF5 1701 aa11.69□□□□□ -0.54
CHCHD4P3-201ENST00000455954 SNED1Q8TER0 1413 aa11.69□□□□□ -0.54
CHCHD4P3-201ENST00000455954 PCCAP05165 728 aaPredicted RBP11.68□□□□□ -0.54
CHCHD4P3-201ENST00000455954 VEGFAP15692 232 aaPredicted RBP11.68□□□□□ -0.54
CHCHD4P3-201ENST00000455954 KCNJ4P48050 445 aa11.68□□□□□ -0.54
CHCHD4P3-201ENST00000455954 GRAPQ13588 217 aa11.68□□□□□ -0.54
CHCHD4P3-201ENST00000455954 PTPN14Q15678 1187 aa11.68□□□□□ -0.54
CHCHD4P3-201ENST00000455954 NAA16Q6N069 864 aaPredicted RBP11.68□□□□□ -0.54
CHCHD4P3-201ENST00000455954 TMC4Q7Z404 712 aa11.68□□□□□ -0.54
CHCHD4P3-201ENST00000455954 LRRC8AQ8IWT6 810 aa11.68□□□□□ -0.54
CHCHD4P3-201ENST00000455954 RGS22Q8NE09 1264 aa11.68□□□□□ -0.54
CHCHD4P3-201ENST00000455954 GRAPLQ8TC17 118 aaPredicted RBP11.68□□□□□ -0.54
CHCHD4P3-201ENST00000455954 CACTINQ8WUQ7 758 aaKnown RBP11.68□□□□□ -0.54
CHCHD4P3-201ENST00000455954 GTF3C6Q969F1 213 aa11.68□□□□□ -0.54
CHCHD4P3-201ENST00000455954 C16orf45Q96MC5 204 aaPredicted RBP11.68□□□□□ -0.54
CHCHD4P3-201ENST00000455954 ANO10Q9NW15 660 aa11.68□□□□□ -0.54
CHCHD4P3-201ENST00000455954 DICER1Q9UPY3 1922 aaKnown RBP11.68□□□□□ -0.54
CHCHD4P3-201ENST00000455954 LAMB2P55268 1798 aa11.67□□□□□ -0.54
CHCHD4P3-201ENST00000455954 DDX60Q8IY21 1712 aaKnown RBP11.67□□□□□ -0.54
CHCHD4P3-201ENST00000455954 CCP110O43303 1012 aa11.67□□□□□ -0.54
CHCHD4P3-201ENST00000455954 IGKV5-2P06315 115 aa11.67□□□□□ -0.54
CHCHD4P3-201ENST00000455954 NBPF7P0C2Y1 421 aaPredicted RBP11.67□□□□□ -0.54
CHCHD4P3-201ENST00000455954 CPA1P15085 419 aa11.67□□□□□ -0.54
CHCHD4P3-201ENST00000455954 NMIQ13287 307 aaPredicted RBP11.67□□□□□ -0.54
CHCHD4P3-201ENST00000455954 TOB2Q14106 344 aaPredicted RBP11.67□□□□□ -0.54
CHCHD4P3-201ENST00000455954 NECAB1Q8N987 351 aa11.67□□□□□ -0.54
CHCHD4P3-201ENST00000455954 SMARCC2Q8TAQ2 1214 aa11.67□□□□□ -0.54
CHCHD4P3-201ENST00000455954 RBM46Q8TBY0 533 aaKnown RBP11.67□□□□□ -0.54
CHCHD4P3-201ENST00000455954 BICD2Q8TD16 824 aa11.67□□□□□ -0.54
CHCHD4P3-201ENST00000455954 JDP2Q8WYK2 163 aa11.67□□□□□ -0.54
CHCHD4P3-201ENST00000455954 BPIFA3Q9BQP9 254 aa11.67□□□□□ -0.54
CHCHD4P3-201ENST00000455954 OSBPL5Q9H0X9 879 aaPredicted RBP11.67□□□□□ -0.54
CHCHD4P3-201ENST00000455954 RCOR1Q9UKL0 485 aa11.67□□□□□ -0.54
CHCHD4P3-201ENST00000455954 SPDYE4A6NLX3 237 aa11.66□□□□□ -0.54
CHCHD4P3-201ENST00000455954 NRDCO43847 1150 aa11.66□□□□□ -0.54
CHCHD4P3-201ENST00000455954 PDE8AO60658 829 aa11.66□□□□□ -0.54
CHCHD4P3-201ENST00000455954 SLU7O95391 586 aaKnown RBP11.66□□□□□ -0.54
CHCHD4P3-201ENST00000455954 HMGB1P09429 215 aaKnown RBP11.66□□□□□ -0.54
CHCHD4P3-201ENST00000455954 LRMPQ12912 555 aa11.66□□□□□ -0.54
CHCHD4P3-201ENST00000455954 ZNF771Q7L3S4 317 aaPredicted RBP11.66□□□□□ -0.54
CHCHD4P3-201ENST00000455954 CCDC150Q8NCX0 1101 aa11.66□□□□□ -0.54
CHCHD4P3-201ENST00000455954 SUPT20HQ8NEM7 779 aa11.66□□□□□ -0.54
CHCHD4P3-201ENST00000455954 PGBD1Q96JS3 809 aa11.66□□□□□ -0.54
CHCHD4P3-201ENST00000455954 ZNF396Q96N95 335 aaPredicted RBP11.66□□□□□ -0.54
CHCHD4P3-201ENST00000455954 NAT10Q9H0A0 1025 aaKnown RBP11.66□□□□□ -0.54
CHCHD4P3-201ENST00000455954 VPS33BQ9H267 617 aa11.66□□□□□ -0.54
CHCHD4P3-201ENST00000455954 U3KPZ7 1027 aaPredicted RBP11.66□□□□□ -0.54
CHCHD4P3-201ENST00000455954 CDHR2Q9BYE9 1310 aa11.65□□□□□ -0.54
CHCHD4P3-201ENST00000455954 NEURL1BA8MQ27 555 aa11.65□□□□□ -0.54
CHCHD4P3-201ENST00000455954 FZD9O00144 591 aa11.65□□□□□ -0.54
CHCHD4P3-201ENST00000455954 DDNO94850 711 aaPredicted RBP11.65□□□□□ -0.54
CHCHD4P3-201ENST00000455954 SLFN14P0C7P3 912 aa11.65□□□□□ -0.54
CHCHD4P3-201ENST00000455954 CWF19L2Q2TBE0 894 aaKnown RBP11.65□□□□□ -0.54
CHCHD4P3-201ENST00000455954 CCDC152Q4G0S7 254 aa11.65□□□□□ -0.54
CHCHD4P3-201ENST00000455954 DPP8Q6V1X1 898 aaPredicted RBP11.65□□□□□ -0.54
CHCHD4P3-201ENST00000455954 CCDC73Q6ZRK6 1079 aa11.65□□□□□ -0.54
CHCHD4P3-201ENST00000455954 SLC51AQ86UW1 340 aa11.65□□□□□ -0.54
CHCHD4P3-201ENST00000455954 AACSQ86V21 672 aa11.65□□□□□ -0.54
CHCHD4P3-201ENST00000455954 CKAP2LQ8IYA6 745 aa11.65□□□□□ -0.54
CHCHD4P3-201ENST00000455954 LARGE2Q8N3Y3 721 aa11.65□□□□□ -0.54
CHCHD4P3-201ENST00000455954 CELF1Q92879 486 aaKnown RBP11.65□□□□□ -0.54
CHCHD4P3-201ENST00000455954 RTFDC1Q9BY42 306 aaPredicted RBP11.65□□□□□ -0.54
CHCHD4P3-201ENST00000455954 DNAJC25Q9H1X3 360 aa11.65□□□□□ -0.54
CHCHD4P3-201ENST00000455954 L2HGDHQ9H9P8 463 aa11.65□□□□□ -0.54
CHCHD4P3-201ENST00000455954 PODXL2Q9NZ53 605 aa11.65□□□□□ -0.54
CHCHD4P3-201ENST00000455954 WDR90Q96KV7 1748 aa11.64□□□□□ -0.55
CHCHD4P3-201ENST00000455954 POTECB2RU33 542 aa11.64□□□□□ -0.55
CHCHD4P3-201ENST00000455954 H7C1W4 665 aa11.64□□□□□ -0.55
CHCHD4P3-201ENST00000455954 NR1I2O75469 434 aa11.64□□□□□ -0.55
CHCHD4P3-201ENST00000455954 HSPA6P17066 643 aa11.64□□□□□ -0.55
CHCHD4P3-201ENST00000455954 RPS8P62241 208 aaKnown RBP11.64□□□□□ -0.55
CHCHD4P3-201ENST00000455954 CCZ1BP86790 482 aa11.64□□□□□ -0.55
CHCHD4P3-201ENST00000455954 CCZ1P86791 482 aaPredicted RBP11.64□□□□□ -0.55
CHCHD4P3-201ENST00000455954 FSTL1Q12841 308 aa11.64□□□□□ -0.55
CHCHD4P3-201ENST00000455954 G3BP1Q13283 466 aaKnown RBP eCLIP11.64□□□□□ -0.55
CHCHD4P3-201ENST00000455954 TERF2Q15554 542 aa11.64□□□□□ -0.55
CHCHD4P3-201ENST00000455954 CAMK4Q16566 473 aa11.64□□□□□ -0.55
CHCHD4P3-201ENST00000455954 CCDC144BQ3MJ40 725 aa11.64□□□□□ -0.55
CHCHD4P3-201ENST00000455954 CCDC144CPQ8IYA2 1237 aa11.64□□□□□ -0.55
CHCHD4P3-201ENST00000455954 CEP57L1Q8IYX8 460 aa11.64□□□□□ -0.55
CHCHD4P3-201ENST00000455954 CCAR2Q8N163 923 aaKnown RBP11.64□□□□□ -0.55
CHCHD4P3-201ENST00000455954 LINS1Q8NG48 757 aa11.64□□□□□ -0.55
CHCHD4P3-201ENST00000455954 ZNF541Q9H0D2 1346 aa11.63□□□□□ -0.55
CHCHD4P3-201ENST00000455954 IQCA1LA6NCM1 817 aa11.63□□□□□ -0.55
CHCHD4P3-201ENST00000455954 CCDC69A6NI79 296 aa11.63□□□□□ -0.55
CHCHD4P3-201ENST00000455954 H3BQV1 296 aa11.63□□□□□ -0.55
CHCHD4P3-201ENST00000455954 PPIP5K2O43314 1243 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms