RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 MAP3K9P80192 1104 aa14.79□□□□□ -0.04
PDGFB-204ENST00000455790 NOM1Q5C9Z4 860 aaKnown RBP14.79□□□□□ -0.04
PDGFB-204ENST00000455790 ZBED9Q6R2W3 1325 aa14.79□□□□□ -0.04
PDGFB-204ENST00000455790 PI16Q6UXB8 463 aa14.79□□□□□ -0.04
PDGFB-204ENST00000455790 SNCAIPQ9Y6H5 919 aa14.79□□□□□ -0.04
PDGFB-204ENST00000455790 RFX7Q2KHR2 1363 aa14.78□□□□□ -0.04
PDGFB-204ENST00000455790 ZBTB22O15209 634 aa14.78□□□□□ -0.04
PDGFB-204ENST00000455790 TCP10Q12799 353 aa14.78□□□□□ -0.04
PDGFB-204ENST00000455790 OTUD5Q96G74 571 aa14.78□□□□□ -0.04
PDGFB-204ENST00000455790 MS4A4AQ96JQ5 239 aa14.78□□□□□ -0.04
PDGFB-204ENST00000455790 WRNIP1Q96S55 665 aa14.78□□□□□ -0.04
PDGFB-204ENST00000455790 FAM198AQ9UFP1 575 aa14.78□□□□□ -0.04
PDGFB-204ENST00000455790 GAKO14976 1311 aa14.77□□□□□ -0.04
PDGFB-204ENST00000455790 PDS5AQ29RF7 1337 aaKnown RBP14.77□□□□□ -0.04
PDGFB-204ENST00000455790 TESPA1A2RU30 521 aaPredicted RBP14.77□□□□□ -0.05
PDGFB-204ENST00000455790 FKTNO75072 461 aa14.77□□□□□ -0.05
PDGFB-204ENST00000455790 ALDH1A1P00352 501 aa14.77□□□□□ -0.05
PDGFB-204ENST00000455790 INHBEP58166 350 aa14.77□□□□□ -0.05
PDGFB-204ENST00000455790 CRHR2Q13324 411 aa14.77□□□□□ -0.05
PDGFB-204ENST00000455790 POLA2Q14181 598 aa14.77□□□□□ -0.05
PDGFB-204ENST00000455790 MVPQ14764 893 aaKnown RBP14.77□□□□□ -0.05
PDGFB-204ENST00000455790 MIGA2Q7L4E1 593 aa14.77□□□□□ -0.05
PDGFB-204ENST00000455790 ZFPM1Q8IX07 1006 aa14.77□□□□□ -0.05
PDGFB-204ENST00000455790 BRI3BPQ8WY22 251 aa14.77□□□□□ -0.05
PDGFB-204ENST00000455790 ZKSCAN4Q969J2 545 aaPredicted RBP14.77□□□□□ -0.05
PDGFB-204ENST00000455790 NEUROD6Q96NK8 337 aa14.77□□□□□ -0.05
PDGFB-204ENST00000455790 ABCF2Q9UG63 623 aa14.77□□□□□ -0.05
PDGFB-204ENST00000455790 AKAP2Q9Y2D5 859 aa14.77□□□□□ -0.05
PDGFB-204ENST00000455790 CSADQ9Y600 493 aa14.77□□□□□ -0.05
PDGFB-204ENST00000455790 SPDYE5A6NIY4 337 aa14.76□□□□□ -0.05
PDGFB-204ENST00000455790 TNRC18O15417 2968 aaPredicted RBP14.76□□□□□ -0.05
PDGFB-204ENST00000455790 INPP5BP32019 993 aa14.76□□□□□ -0.05
PDGFB-204ENST00000455790 RGS19P49795 217 aa14.76□□□□□ -0.05
PDGFB-204ENST00000455790 SOX10P56693 466 aa14.76□□□□□ -0.05
PDGFB-204ENST00000455790 DZIP1Q86YF9 867 aaKnown RBP14.76□□□□□ -0.05
PDGFB-204ENST00000455790 ITPRIPQ8IWB1 547 aa14.76□□□□□ -0.05
PDGFB-204ENST00000455790 FTSJ3Q8IY81 847 aaKnown RBP14.76□□□□□ -0.05
PDGFB-204ENST00000455790 ZNF384Q8TF68 577 aa14.76□□□□□ -0.05
PDGFB-204ENST00000455790 FAM151AQ8WW52 585 aa14.76□□□□□ -0.05
PDGFB-204ENST00000455790 USP40Q9NVE5 1235 aa14.76□□□□□ -0.05
PDGFB-204ENST00000455790 HMG20BQ9P0W2 317 aa14.76□□□□□ -0.05
PDGFB-204ENST00000455790 HPS5Q9UPZ3 1129 aa14.76□□□□□ -0.05
PDGFB-204ENST00000455790 ATRNL1Q5VV63 1379 aa14.75□□□□□ -0.05
PDGFB-204ENST00000455790 CCL15-CCL14A0A0B4J2E2 113 aa14.75□□□□□ -0.05
PDGFB-204ENST00000455790 CAP1Q01518 475 aa14.75□□□□□ -0.05
PDGFB-204ENST00000455790 G3BP1Q13283 466 aaKnown RBP eCLIP14.75□□□□□ -0.05
PDGFB-204ENST00000455790 CCL15Q16663 113 aa14.75□□□□□ -0.05
PDGFB-204ENST00000455790 ZGPATQ8N5A5 531 aaKnown RBP14.75□□□□□ -0.05
PDGFB-204ENST00000455790 SSH3Q8TE77 659 aa14.75□□□□□ -0.05
PDGFB-204ENST00000455790 MYH2Q9UKX2 1941 aa14.74□□□□□ -0.05
PDGFB-204ENST00000455790 CENPFP49454 3210 aa14.74□□□□□ -0.05
PDGFB-204ENST00000455790 SLURP2P0DP57 97 aa14.74□□□□□ -0.05
PDGFB-204ENST00000455790 ARID4AP29374 1257 aaPredicted RBP14.74□□□□□ -0.05
PDGFB-204ENST00000455790 RGS3P49796 1198 aa14.74□□□□□ -0.05
PDGFB-204ENST00000455790 MECOMQ03112 1051 aa14.74□□□□□ -0.05
PDGFB-204ENST00000455790 DCAF15Q66K64 600 aa14.74□□□□□ -0.05
PDGFB-204ENST00000455790 TBC1D9Q6ZT07 1266 aa14.74□□□□□ -0.05
PDGFB-204ENST00000455790 FAM43AQ8N2R8 423 aa14.74□□□□□ -0.05
PDGFB-204ENST00000455790 PANK1Q8TE04 598 aa14.74□□□□□ -0.05
PDGFB-204ENST00000455790 ZNF341Q9BYN7 854 aa14.74□□□□□ -0.05
PDGFB-204ENST00000455790 DDX4Q9NQI0 724 aaKnown RBP14.74□□□□□ -0.05
PDGFB-204ENST00000455790 MROH7-TTC4A0A0A0MT08 1334 aa14.73□□□□□ -0.05
PDGFB-204ENST00000455790 IRF6O14896 467 aa14.73□□□□□ -0.05
PDGFB-204ENST00000455790 ZBTB7BO15156 539 aaPredicted RBP14.73□□□□□ -0.05
PDGFB-204ENST00000455790 WDHD1O75717 1129 aaPredicted RBP14.73□□□□□ -0.05
PDGFB-204ENST00000455790 MCAMP43121 646 aa14.73□□□□□ -0.05
PDGFB-204ENST00000455790 BTDP43251 543 aa14.73□□□□□ -0.05
PDGFB-204ENST00000455790 GTF2A2P52657 109 aa14.73□□□□□ -0.05
PDGFB-204ENST00000455790 ATP8B2P98198 1209 aa14.73□□□□□ -0.05
PDGFB-204ENST00000455790 GORABQ5T7V8 394 aa14.73□□□□□ -0.05
PDGFB-204ENST00000455790 SH3BP5LQ7L8J4 393 aa14.73□□□□□ -0.05
PDGFB-204ENST00000455790 ERO1BQ86YB8 467 aa14.73□□□□□ -0.05
PDGFB-204ENST00000455790 SPATA5Q8NB90 893 aa14.73□□□□□ -0.05
PDGFB-204ENST00000455790 HOOK2Q96ED9 719 aa14.73□□□□□ -0.05
PDGFB-204ENST00000455790 DOCK2Q92608 1830 aa14.72□□□□□ -0.05
PDGFB-204ENST00000455790 MLLT1Q03111 559 aaPredicted RBP14.72□□□□□ -0.05
PDGFB-204ENST00000455790 PPIL2Q13356 520 aa14.72□□□□□ -0.05
PDGFB-204ENST00000455790 PKN2Q16513 984 aaKnown RBP14.72□□□□□ -0.05
PDGFB-204ENST00000455790 TNNI3KQ59H18 835 aa14.72□□□□□ -0.05
PDGFB-204ENST00000455790 OTUD7BQ6GQQ9 843 aa14.72□□□□□ -0.05
PDGFB-204ENST00000455790 FBXO46Q6PJ61 603 aaPredicted RBP14.72□□□□□ -0.05
PDGFB-204ENST00000455790 OTOP1Q7RTM1 612 aa14.72□□□□□ -0.05
PDGFB-204ENST00000455790 CD99L2Q8TCZ2 262 aa14.72□□□□□ -0.05
PDGFB-204ENST00000455790 FAM163AQ96GL9 167 aaPredicted RBP14.72□□□□□ -0.05
PDGFB-204ENST00000455790 DBNDD2Q9BQY9 259 aa14.72□□□□□ -0.05
PDGFB-204ENST00000455790 IDI2Q9BXS1 227 aa14.72□□□□□ -0.05
PDGFB-204ENST00000455790 ZNF112Q9UJU3 913 aa14.72□□□□□ -0.05
PDGFB-204ENST00000455790 FPGT-TNNI3KV9GXZ4 949 aa14.72□□□□□ -0.05
PDGFB-204ENST00000455790 SURF6O75683 361 aaKnown RBP14.71□□□□□ -0.05
PDGFB-204ENST00000455790 RHBDL3P58872 404 aa14.71□□□□□ -0.05
PDGFB-204ENST00000455790 OS9Q13438 667 aaPredicted RBP14.71□□□□□ -0.05
PDGFB-204ENST00000455790 PICALMQ13492 652 aa14.71□□□□□ -0.05
PDGFB-204ENST00000455790 TAF1CQ15572 869 aaPredicted RBP14.71□□□□□ -0.05
PDGFB-204ENST00000455790 SPTY2D1Q68D10 685 aaPredicted RBP14.71□□□□□ -0.05
PDGFB-204ENST00000455790 ERICH6Q7L0X2 663 aa14.71□□□□□ -0.05
PDGFB-204ENST00000455790 SNRKQ9NRH2 765 aa14.71□□□□□ -0.05
PDGFB-204ENST00000455790 TLR7Q9NYK1 1049 aaKnown RBP14.71□□□□□ -0.05
PDGFB-204ENST00000455790 TRIM17Q9Y577 477 aa14.71□□□□□ -0.05
PDGFB-204ENST00000455790 GPR75-ASB3A0A0A6YYF3 556 aa14.7□□□□□ -0.06
PDGFB-204ENST00000455790 DDTLA6NHG4 134 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms