RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 CTCFP49711 727 aaPredicted RBP21.7■■□□□ 1.06
COPS7A-202ENST00000455113 CACNB3P54284 484 aa21.7■■□□□ 1.06
COPS7A-202ENST00000455113 B4GALNT3Q6L9W6 998 aa21.7■■□□□ 1.06
COPS7A-202ENST00000455113 FAM83AQ86UY5 434 aa21.7■■□□□ 1.06
COPS7A-202ENST00000455113 AACSQ86V21 672 aa21.7■■□□□ 1.06
COPS7A-202ENST00000455113 HOOK2Q96ED9 719 aa21.7■■□□□ 1.06
COPS7A-202ENST00000455113 RAI14Q9P0K7 980 aa21.7■■□□□ 1.06
COPS7A-202ENST00000455113 LRP2BPQ9P2M1 347 aa21.7■■□□□ 1.06
COPS7A-202ENST00000455113 MYH2Q9UKX2 1941 aa21.7■■□□□ 1.06
COPS7A-202ENST00000455113 GSTO1P78417 241 aa21.69■■□□□ 1.06
COPS7A-202ENST00000455113 EAF2Q96CJ1 260 aaPredicted RBP21.69■■□□□ 1.06
COPS7A-202ENST00000455113 TMEM39BQ9GZU3 492 aa21.69■■□□□ 1.06
COPS7A-202ENST00000455113 FAM155AB1AL88 458 aaPredicted RBP21.69■■□□□ 1.06
COPS7A-202ENST00000455113 FOXN1O15353 648 aa21.69■■□□□ 1.06
COPS7A-202ENST00000455113 CA12O43570 354 aa21.69■■□□□ 1.06
COPS7A-202ENST00000455113 LDHCP07864 332 aa21.69■■□□□ 1.06
COPS7A-202ENST00000455113 PI16Q6UXB8 463 aa21.69■■□□□ 1.06
COPS7A-202ENST00000455113 REM2Q8IYK8 340 aaPredicted RBP21.69■■□□□ 1.06
COPS7A-202ENST00000455113 ZNF512BQ96KM6 892 aaPredicted RBP21.69■■□□□ 1.06
COPS7A-202ENST00000455113 USP40Q9NVE5 1235 aa21.69■■□□□ 1.06
COPS7A-202ENST00000455113 DBNLQ9UJU6 430 aaKnown RBP21.69■■□□□ 1.06
COPS7A-202ENST00000455113 UNCXA6NJT0 531 aa21.68■■□□□ 1.06
COPS7A-202ENST00000455113 MAP3K11Q16584 847 aa21.68■■□□□ 1.06
COPS7A-202ENST00000455113 RASAL3Q86YV0 1011 aa21.68■■□□□ 1.06
COPS7A-202ENST00000455113 SIRT2Q8IXJ6 389 aa21.68■■□□□ 1.06
COPS7A-202ENST00000455113 IL1RAPL2Q9NP60 686 aa21.68■■□□□ 1.06
COPS7A-202ENST00000455113 KIF23Q02241 960 aaPredicted RBP21.67■■□□□ 1.06
COPS7A-202ENST00000455113 MECOMQ03112 1051 aa21.67■■□□□ 1.06
COPS7A-202ENST00000455113 CDC42EP5Q6NZY7 148 aa21.67■■□□□ 1.06
COPS7A-202ENST00000455113 TBC1D9Q6ZT07 1266 aa21.67■■□□□ 1.06
COPS7A-202ENST00000455113 SLC10A4Q96EP9 437 aa21.67■■□□□ 1.06
COPS7A-202ENST00000455113 BCL11AQ9H165 835 aa21.67■■□□□ 1.06
COPS7A-202ENST00000455113 IFIT2P09913 472 aaKnown RBP21.66■■□□□ 1.06
COPS7A-202ENST00000455113 FAM163AQ96GL9 167 aaPredicted RBP21.66■■□□□ 1.06
COPS7A-202ENST00000455113 SNRKQ9NRH2 765 aa21.66■■□□□ 1.06
COPS7A-202ENST00000455113 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.66■■□□□ 1.06
COPS7A-202ENST00000455113 FZD1Q9UP38 647 aa21.66■■□□□ 1.06
COPS7A-202ENST00000455113 GAKO14976 1311 aa21.66■■□□□ 1.06
COPS7A-202ENST00000455113 LDLRAD1Q5T700 205 aa21.66■■□□□ 1.06
COPS7A-202ENST00000455113 ANKRD13AQ8IZ07 590 aa21.66■■□□□ 1.06
COPS7A-202ENST00000455113 NOL10Q9BSC4 688 aaKnown RBP21.66■■□□□ 1.06
COPS7A-202ENST00000455113 TLR7Q9NYK1 1049 aaKnown RBP21.66■■□□□ 1.06
COPS7A-202ENST00000455113 AK9Q5TCS8 1911 aa21.65■■□□□ 1.06
COPS7A-202ENST00000455113 MROH7-TTC4A0A0A0MT08 1334 aa21.65■■□□□ 1.06
COPS7A-202ENST00000455113 FAM151AQ8WW52 585 aa21.65■■□□□ 1.06
COPS7A-202ENST00000455113 TEPSINQ96N21 525 aa21.65■■□□□ 1.06
COPS7A-202ENST00000455113 SSC5DA1L4H1 1573 aa21.64■■□□□ 1.06
COPS7A-202ENST00000455113 IGSF3O75054 1194 aa21.64■■□□□ 1.06
COPS7A-202ENST00000455113 USP2O75604 605 aaPredicted RBP21.64■■□□□ 1.06
COPS7A-202ENST00000455113 IGHDP01880 384 aa21.64■■□□□ 1.06
COPS7A-202ENST00000455113 BTDP43251 543 aa21.64■■□□□ 1.06
COPS7A-202ENST00000455113 TCP10Q12799 353 aa21.64■■□□□ 1.06
COPS7A-202ENST00000455113 DCAF15Q66K64 600 aa21.64■■□□□ 1.06
COPS7A-202ENST00000455113 NSUN4Q96CB9 384 aaKnown RBP21.64■■□□□ 1.06
COPS7A-202ENST00000455113 ZIC5Q96T25 663 aa21.64■■□□□ 1.06
COPS7A-202ENST00000455113 RWDD1Q9H446 243 aaPredicted RBP21.64■■□□□ 1.06
COPS7A-202ENST00000455113 HDAC1Q13547 482 aaPredicted RBP21.63■■□□□ 1.05
COPS7A-202ENST00000455113 RPAP1Q9BWH6 1393 aaPredicted RBP21.63■■□□□ 1.05
COPS7A-202ENST00000455113 ZAP70P43403 619 aa21.63■■□□□ 1.05
COPS7A-202ENST00000455113 LBX1P52954 281 aa21.63■■□□□ 1.05
COPS7A-202ENST00000455113 MKRN3Q13064 507 aaKnown RBP21.62■■□□□ 1.05
COPS7A-202ENST00000455113 NAA16Q6N069 864 aaPredicted RBP21.62■■□□□ 1.05
COPS7A-202ENST00000455113 LRRCC1Q9C099 1032 aa21.62■■□□□ 1.05
COPS7A-202ENST00000455113 PRDM10Q9NQV6 1147 aa21.62■■□□□ 1.05
COPS7A-202ENST00000455113 CSADQ9Y600 493 aa21.62■■□□□ 1.05
COPS7A-202ENST00000455113 AKAP11Q9UKA4 1901 aa21.62■■□□□ 1.05
COPS7A-202ENST00000455113 GPR75-ASB3A0A0A6YYF3 556 aa21.61■■□□□ 1.05
COPS7A-202ENST00000455113 BAG3O95817 575 aa21.61■■□□□ 1.05
COPS7A-202ENST00000455113 CYP2E1P05181 493 aaPredicted RBP21.61■■□□□ 1.05
COPS7A-202ENST00000455113 SREBF2Q12772 1141 aa21.61■■□□□ 1.05
COPS7A-202ENST00000455113 CSRNP1Q96S65 589 aa21.61■■□□□ 1.05
COPS7A-202ENST00000455113 IDI2Q9BXS1 227 aa21.61■■□□□ 1.05
COPS7A-202ENST00000455113 MAP4K4O95819 1239 aaPredicted RBP21.6■■□□□ 1.05
COPS7A-202ENST00000455113 NFIAQ12857 509 aa21.6■■□□□ 1.05
COPS7A-202ENST00000455113 ZSCAN29Q8IWY8 852 aaPredicted RBP21.6■■□□□ 1.05
COPS7A-202ENST00000455113 CDAN1Q8IWY9 1227 aa21.6■■□□□ 1.05
COPS7A-202ENST00000455113 ENTPD3O75355 529 aa21.6■■□□□ 1.05
COPS7A-202ENST00000455113 ZBTB48P10074 688 aaPredicted RBP21.6■■□□□ 1.05
COPS7A-202ENST00000455113 HSPA8P11142 646 aaKnown RBP21.6■■□□□ 1.05
COPS7A-202ENST00000455113 MAP3K9P80192 1104 aa21.6■■□□□ 1.05
COPS7A-202ENST00000455113 COL13A1Q5TAT6 717 aaPredicted RBP21.6■■□□□ 1.05
COPS7A-202ENST00000455113 IDH1O75874 414 aaKnown RBP21.59■■□□□ 1.05
COPS7A-202ENST00000455113 RGS3P49796 1198 aa21.59■■□□□ 1.05
COPS7A-202ENST00000455113 PICALMQ13492 652 aa21.59■■□□□ 1.05
COPS7A-202ENST00000455113 TTF1Q15361 905 aaPredicted RBP21.59■■□□□ 1.05
COPS7A-202ENST00000455113 SPRYD7Q5W111 196 aa21.59■■□□□ 1.05
COPS7A-202ENST00000455113 CLMNQ96JQ2 1002 aa21.59■■□□□ 1.05
COPS7A-202ENST00000455113 SAGE1Q9NXZ1 904 aa21.59■■□□□ 1.05
COPS7A-202ENST00000455113 PLCG2P16885 1265 aa21.58■■□□□ 1.05
COPS7A-202ENST00000455113 WRNIP1Q96S55 665 aa21.58■■□□□ 1.05
COPS7A-202ENST00000455113 ZNF341Q9BYN7 854 aa21.58■■□□□ 1.05
COPS7A-202ENST00000455113 FAM198AQ9UFP1 575 aa21.58■■□□□ 1.05
COPS7A-202ENST00000455113 INHBEP58166 350 aa21.58■■□□□ 1.04
COPS7A-202ENST00000455113 MAP3K12Q12852 859 aa21.58■■□□□ 1.04
COPS7A-202ENST00000455113 CENPQQ7L2Z9 268 aaPredicted RBP21.58■■□□□ 1.04
COPS7A-202ENST00000455113 MIGA2Q7L4E1 593 aa21.58■■□□□ 1.04
COPS7A-202ENST00000455113 TSKSQ9UJT2 592 aa21.58■■□□□ 1.04
COPS7A-202ENST00000455113 MANSC4A6NHS7 340 aaPredicted RBP21.57■■□□□ 1.04
COPS7A-202ENST00000455113 TRPA1O75762 1119 aa21.57■■□□□ 1.04
COPS7A-202ENST00000455113 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.57■■□□□ 1.043e-6■■■□□ 14.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms