RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 OPTNQ96CV9 577 aa17.44■□□□□ 0.38
RFTN1-207ENST00000453536 DBNDD2Q9BQY9 259 aa17.44■□□□□ 0.38
RFTN1-207ENST00000453536 SNRKQ9NRH2 765 aa17.44■□□□□ 0.38
RFTN1-207ENST00000453536 HMG20BQ9P0W2 317 aa17.44■□□□□ 0.38
RFTN1-207ENST00000453536 ABCF2Q9UG63 623 aa17.44■□□□□ 0.38
RFTN1-207ENST00000453536 SIPA1L1O43166 1804 aa17.44■□□□□ 0.38
RFTN1-207ENST00000453536 MCAMP43121 646 aa17.43■□□□□ 0.38
RFTN1-207ENST00000453536 ATP8B2P98198 1209 aa17.43■□□□□ 0.38
RFTN1-207ENST00000453536 TNFAIP1Q13829 316 aa17.43■□□□□ 0.38
RFTN1-207ENST00000453536 C20orf194Q5TEA3 1177 aa17.43■□□□□ 0.38
RFTN1-207ENST00000453536 DDX4Q9NQI0 724 aaKnown RBP17.43■□□□□ 0.38
RFTN1-207ENST00000453536 DENND2AQ9ULE3 1009 aa17.43■□□□□ 0.38
RFTN1-207ENST00000453536 SNCAIPQ9Y6H5 919 aa17.43■□□□□ 0.38
RFTN1-207ENST00000453536 NDUFB9Q9Y6M9 179 aa17.43■□□□□ 0.38
RFTN1-207ENST00000453536 SALL1Q9NSC2 1324 aa17.43■□□□□ 0.38
RFTN1-207ENST00000453536 RFX7Q2KHR2 1363 aa17.42■□□□□ 0.38
RFTN1-207ENST00000453536 INPP5BP32019 993 aa17.42■□□□□ 0.38
RFTN1-207ENST00000453536 IREB2P48200 963 aaKnown RBP17.42■□□□□ 0.38
RFTN1-207ENST00000453536 SH3BP5LQ7L8J4 393 aa17.42■□□□□ 0.38
RFTN1-207ENST00000453536 ANKRD13AQ8IZ07 590 aa17.42■□□□□ 0.38
RFTN1-207ENST00000453536 SSH3Q8TE77 659 aa17.42■□□□□ 0.38
RFTN1-207ENST00000453536 USP40Q9NVE5 1235 aa17.42■□□□□ 0.38
RFTN1-207ENST00000453536 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.42■□□□□ 0.38
RFTN1-207ENST00000453536 MAST3O60307 1309 aa17.42■□□□□ 0.38
RFTN1-207ENST00000453536 SURF6O75683 361 aaKnown RBP17.41■□□□□ 0.38
RFTN1-207ENST00000453536 G3BP1Q13283 466 aaKnown RBP eCLIP17.41■□□□□ 0.38
RFTN1-207ENST00000453536 CEP85Q6P2H3 762 aa17.41■□□□□ 0.38
RFTN1-207ENST00000453536 IFNL1Q8IU54 200 aa17.41■□□□□ 0.38
RFTN1-207ENST00000453536 OTUD5Q96G74 571 aa17.41■□□□□ 0.38
RFTN1-207ENST00000453536 GNL3LQ9NVN8 582 aaKnown RBP17.41■□□□□ 0.38
RFTN1-207ENST00000453536 SUGT1Q9Y2Z0 365 aa17.41■□□□□ 0.38
RFTN1-207ENST00000453536 PHIPQ8WWQ0 1821 aa17.41■□□□□ 0.38
RFTN1-207ENST00000453536 TNRC18O15417 2968 aaPredicted RBP17.4■□□□□ 0.38
RFTN1-207ENST00000453536 GPR25O00155 361 aa17.4■□□□□ 0.38
RFTN1-207ENST00000453536 TNNI2P48788 182 aa17.4■□□□□ 0.38
RFTN1-207ENST00000453536 MECOMQ03112 1051 aa17.4■□□□□ 0.38
RFTN1-207ENST00000453536 TNNI3KQ59H18 835 aa17.4■□□□□ 0.38
RFTN1-207ENST00000453536 BRI3BPQ8WY22 251 aa17.4■□□□□ 0.38
RFTN1-207ENST00000453536 MS4A4AQ96JQ5 239 aa17.4■□□□□ 0.38
RFTN1-207ENST00000453536 WRNIP1Q96S55 665 aa17.4■□□□□ 0.38
RFTN1-207ENST00000453536 HDAC5Q9UQL6 1122 aa17.4■□□□□ 0.38
RFTN1-207ENST00000453536 EXOC6BQ9Y2D4 811 aa17.4■□□□□ 0.38
RFTN1-207ENST00000453536 COG6Q9Y2V7 657 aa17.4■□□□□ 0.38
RFTN1-207ENST00000453536 FPGT-TNNI3KV9GXZ4 949 aa17.4■□□□□ 0.38
RFTN1-207ENST00000453536 PTPRFP10586 1907 aa17.4■□□□□ 0.38
RFTN1-207ENST00000453536 GAKO14976 1311 aa17.4■□□□□ 0.38
RFTN1-207ENST00000453536 ATAD5Q96QE3 1844 aa17.4■□□□□ 0.38
RFTN1-207ENST00000453536 ATRNL1Q5VV63 1379 aa17.4■□□□□ 0.38
RFTN1-207ENST00000453536 BRCA2P51587 3418 aa17.39■□□□□ 0.37
RFTN1-207ENST00000453536 FAM196BA6NMK8 535 aa17.39■□□□□ 0.37
RFTN1-207ENST00000453536 ARID4AP29374 1257 aaPredicted RBP17.39■□□□□ 0.37
RFTN1-207ENST00000453536 BTDP43251 543 aa17.39■□□□□ 0.37
RFTN1-207ENST00000453536 RGS3P49796 1198 aa17.39■□□□□ 0.37
RFTN1-207ENST00000453536 MAP3K9P80192 1104 aa17.39■□□□□ 0.37
RFTN1-207ENST00000453536 OS9Q13438 667 aaPredicted RBP17.39■□□□□ 0.37
RFTN1-207ENST00000453536 PICALMQ13492 652 aa17.39■□□□□ 0.37
RFTN1-207ENST00000453536 DZIP1Q86YF9 867 aaKnown RBP17.39■□□□□ 0.37
RFTN1-207ENST00000453536 MRIQ9BWK5 157 aa17.39■□□□□ 0.37
RFTN1-207ENST00000453536 CCDC8Q9H0W5 538 aaPredicted RBP17.39■□□□□ 0.37
RFTN1-207ENST00000453536 BCL11AQ9H165 835 aa17.39■□□□□ 0.37
RFTN1-207ENST00000453536 TMOD2Q9NZR1 351 aa17.39■□□□□ 0.37
RFTN1-207ENST00000453536 DBNLQ9UJU6 430 aaKnown RBP17.39■□□□□ 0.37
RFTN1-207ENST00000453536 FOCADQ5VW36 1801 aa17.39■□□□□ 0.37
RFTN1-207ENST00000453536 DOCK1Q14185 1865 aa17.39■□□□□ 0.37
RFTN1-207ENST00000453536 RPAP1Q9BWH6 1393 aaPredicted RBP17.39■□□□□ 0.37
RFTN1-207ENST00000453536 DDTLA6NHG4 134 aaPredicted RBP17.38■□□□□ 0.37
RFTN1-207ENST00000453536 SEMA3EO15041 775 aa17.38■□□□□ 0.37
RFTN1-207ENST00000453536 WDHD1O75717 1129 aaPredicted RBP17.38■□□□□ 0.37
RFTN1-207ENST00000453536 ECM2O94769 699 aaPredicted RBP17.38■□□□□ 0.37
RFTN1-207ENST00000453536 ZBTB48P10074 688 aaPredicted RBP17.38■□□□□ 0.37
RFTN1-207ENST00000453536 SREBF2Q12772 1141 aa17.38■□□□□ 0.37
RFTN1-207ENST00000453536 CRHR2Q13324 411 aa17.38■□□□□ 0.37
RFTN1-207ENST00000453536 MVPQ14764 893 aaKnown RBP17.38■□□□□ 0.37
RFTN1-207ENST00000453536 ADGRA1Q86SQ6 560 aa17.38■□□□□ 0.37
RFTN1-207ENST00000453536 CCDC84Q86UT8 332 aaPredicted RBP17.38■□□□□ 0.37
RFTN1-207ENST00000453536 FAM83AQ86UY5 434 aa17.38■□□□□ 0.37
RFTN1-207ENST00000453536 FAM43AQ8N2R8 423 aa17.38■□□□□ 0.37
RFTN1-207ENST00000453536 SPATA5Q8NB90 893 aa17.38■□□□□ 0.37
RFTN1-207ENST00000453536 EAF2Q96CJ1 260 aaPredicted RBP17.38■□□□□ 0.37
RFTN1-207ENST00000453536 AKAP2Q9Y2D5 859 aa17.38■□□□□ 0.37
RFTN1-207ENST00000453536 MANSC4A6NHS7 340 aaPredicted RBP17.37■□□□□ 0.37
RFTN1-207ENST00000453536 SOX10P56693 466 aa17.37■□□□□ 0.37
RFTN1-207ENST00000453536 RHBDL3P58872 404 aa17.37■□□□□ 0.37
RFTN1-207ENST00000453536 GORABQ5T7V8 394 aa17.37■□□□□ 0.37
RFTN1-207ENST00000453536 SIRT2Q8IXJ6 389 aa17.37■□□□□ 0.37
RFTN1-207ENST00000453536 FAM151AQ8WW52 585 aa17.37■□□□□ 0.37
RFTN1-207ENST00000453536 MROH7-TTC4A0A0A0MT08 1334 aa17.37■□□□□ 0.37
RFTN1-207ENST00000453536 APBB1O00213 710 aa17.36■□□□□ 0.37
RFTN1-207ENST00000453536 CTU1Q7Z7A3 348 aaKnown RBP17.36■□□□□ 0.37
RFTN1-207ENST00000453536 NSUN4Q96CB9 384 aaKnown RBP17.36■□□□□ 0.37
RFTN1-207ENST00000453536 PIH1D3Q9NQM4 214 aaKnown RBP17.36■□□□□ 0.37
RFTN1-207ENST00000453536 CCL15-CCL14A0A0B4J2E2 113 aa17.35■□□□□ 0.37
RFTN1-207ENST00000453536 SPDYE5A6NIY4 337 aa17.35■□□□□ 0.37
RFTN1-207ENST00000453536 IRF6O14896 467 aa17.35■□□□□ 0.37
RFTN1-207ENST00000453536 ZAP70P43403 619 aa17.35■□□□□ 0.37
RFTN1-207ENST00000453536 CCL15Q16663 113 aa17.35■□□□□ 0.37
RFTN1-207ENST00000453536 FKBP1CQ5VVH2 108 aa17.35■□□□□ 0.37
RFTN1-207ENST00000453536 ERICH6Q7L0X2 663 aa17.35■□□□□ 0.37
RFTN1-207ENST00000453536 IL1RAPL2Q9NP60 686 aa17.35■□□□□ 0.37
RFTN1-207ENST00000453536 RAI14Q9P0K7 980 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms