RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 R3HDMLQ9H3Y0 253 aa15.44■□□□□ 0.06
CPSF4-208ENST00000452047 ELP3Q9H9T3 547 aa15.44■□□□□ 0.06
CPSF4-208ENST00000452047 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.44■□□□□ 0.06
CPSF4-208ENST00000452047 GPR25O00155 361 aa15.43■□□□□ 0.06
CPSF4-208ENST00000452047 ALDH1A1P00352 501 aa15.43■□□□□ 0.06
CPSF4-208ENST00000452047 CTU1Q7Z7A3 348 aaKnown RBP15.43■□□□□ 0.06
CPSF4-208ENST00000452047 ZGPATQ8N5A5 531 aaKnown RBP15.43■□□□□ 0.06
CPSF4-208ENST00000452047 SSH3Q8TE77 659 aa15.43■□□□□ 0.06
CPSF4-208ENST00000452047 OPTNQ96CV9 577 aa15.43■□□□□ 0.06
CPSF4-208ENST00000452047 RFX7Q2KHR2 1363 aa15.43■□□□□ 0.06
CPSF4-208ENST00000452047 DOCK2Q92608 1830 aa15.43■□□□□ 0.06
CPSF4-208ENST00000452047 GAKO14976 1311 aa15.43■□□□□ 0.06
CPSF4-208ENST00000452047 TESPA1A2RU30 521 aaPredicted RBP15.42■□□□□ 0.06
CPSF4-208ENST00000452047 CCDC85CA6NKD9 419 aa15.42■□□□□ 0.06
CPSF4-208ENST00000452047 ZBTB7BO15156 539 aaPredicted RBP15.42■□□□□ 0.06
CPSF4-208ENST00000452047 MAP3K9P80192 1104 aa15.42■□□□□ 0.06
CPSF4-208ENST00000452047 NFIAQ12857 509 aa15.42■□□□□ 0.06
CPSF4-208ENST00000452047 ITPRIPQ8IWB1 547 aa15.42■□□□□ 0.06
CPSF4-208ENST00000452047 FAM151AQ8WW52 585 aa15.42■□□□□ 0.06
CPSF4-208ENST00000452047 CNKSR2Q8WXI2 1034 aa15.42■□□□□ 0.06
CPSF4-208ENST00000452047 C1orf115Q9H7X2 142 aa15.42■□□□□ 0.06
CPSF4-208ENST00000452047 TNRC18O15417 2968 aaPredicted RBP15.42■□□□□ 0.06
CPSF4-208ENST00000452047 AK9Q5TCS8 1911 aa15.41■□□□□ 0.06
CPSF4-208ENST00000452047 ATP8B2P98198 1209 aa15.41■□□□□ 0.06
CPSF4-208ENST00000452047 G3BP1Q13283 466 aaKnown RBP eCLIP15.41■□□□□ 0.06
CPSF4-208ENST00000452047 HOOK2Q96ED9 719 aa15.41■□□□□ 0.06
CPSF4-208ENST00000452047 MS4A4AQ96JQ5 239 aa15.41■□□□□ 0.06
CPSF4-208ENST00000452047 NEUROD6Q96NK8 337 aa15.41■□□□□ 0.06
CPSF4-208ENST00000452047 PTPN18Q99952 460 aa15.41■□□□□ 0.06
CPSF4-208ENST00000452047 FAM198AQ9UFP1 575 aa15.41■□□□□ 0.06
CPSF4-208ENST00000452047 CSADQ9Y600 493 aa15.41■□□□□ 0.06
CPSF4-208ENST00000452047 SPDYE5A6NIY4 337 aa15.4■□□□□ 0.06
CPSF4-208ENST00000452047 ARID4AP29374 1257 aaPredicted RBP15.4■□□□□ 0.06
CPSF4-208ENST00000452047 PI16Q6UXB8 463 aa15.4■□□□□ 0.06
CPSF4-208ENST00000452047 DZIP1Q86YF9 867 aaKnown RBP15.4■□□□□ 0.06
CPSF4-208ENST00000452047 ZNF384Q8TF68 577 aa15.4■□□□□ 0.06
CPSF4-208ENST00000452047 FAM163AQ96GL9 167 aaPredicted RBP15.4■□□□□ 0.06
CPSF4-208ENST00000452047 WRNIP1Q96S55 665 aa15.4■□□□□ 0.06
CPSF4-208ENST00000452047 HMG20BQ9P0W2 317 aa15.4■□□□□ 0.06
CPSF4-208ENST00000452047 ABCF2Q9UG63 623 aa15.4■□□□□ 0.06
CPSF4-208ENST00000452047 SNCAIPQ9Y6H5 919 aa15.4■□□□□ 0.06
CPSF4-208ENST00000452047 MAST2Q6P0Q8 1798 aa15.39■□□□□ 0.05
CPSF4-208ENST00000452047 ATRNL1Q5VV63 1379 aa15.39■□□□□ 0.05
CPSF4-208ENST00000452047 TCP10Q12799 353 aa15.39■□□□□ 0.05
CPSF4-208ENST00000452047 DCAF15Q66K64 600 aa15.39■□□□□ 0.05
CPSF4-208ENST00000452047 SPATA5Q8NB90 893 aa15.39■□□□□ 0.05
CPSF4-208ENST00000452047 OTUD5Q96G74 571 aa15.39■□□□□ 0.05
CPSF4-208ENST00000452047 GPR108Q9NPR9 543 aa15.39■□□□□ 0.05
CPSF4-208ENST00000452047 USP40Q9NVE5 1235 aa15.39■□□□□ 0.05
CPSF4-208ENST00000452047 BRCA2P51587 3418 aa15.39■□□□□ 0.05
CPSF4-208ENST00000452047 FKTNO75072 461 aa15.38■□□□□ 0.05
CPSF4-208ENST00000452047 MCAMP43121 646 aa15.38■□□□□ 0.05
CPSF4-208ENST00000452047 MECOMQ03112 1051 aa15.38■□□□□ 0.05
CPSF4-208ENST00000452047 TNNI3KQ59H18 835 aa15.38■□□□□ 0.05
CPSF4-208ENST00000452047 SPTY2D1Q68D10 685 aaPredicted RBP15.38■□□□□ 0.05
CPSF4-208ENST00000452047 MIGA2Q7L4E1 593 aa15.38■□□□□ 0.05
CPSF4-208ENST00000452047 ZFPM1Q8IX07 1006 aa15.38■□□□□ 0.05
CPSF4-208ENST00000452047 PANK1Q8TE04 598 aa15.38■□□□□ 0.05
CPSF4-208ENST00000452047 BRI3BPQ8WY22 251 aa15.38■□□□□ 0.05
CPSF4-208ENST00000452047 ZKSCAN4Q969J2 545 aaPredicted RBP15.38■□□□□ 0.05
CPSF4-208ENST00000452047 IDI2Q9BXS1 227 aa15.38■□□□□ 0.05
CPSF4-208ENST00000452047 ZNF341Q9BYN7 854 aa15.38■□□□□ 0.05
CPSF4-208ENST00000452047 NOP58Q9Y2X3 529 aaKnown RBP15.38■□□□□ 0.05
CPSF4-208ENST00000452047 FPGT-TNNI3KV9GXZ4 949 aa15.38■□□□□ 0.05
CPSF4-208ENST00000452047 MROH7-TTC4A0A0A0MT08 1334 aa15.38■□□□□ 0.05
CPSF4-208ENST00000452047 RGS19P49795 217 aa15.37■□□□□ 0.05
CPSF4-208ENST00000452047 GTF2A2P52657 109 aa15.37■□□□□ 0.05
CPSF4-208ENST00000452047 CRHR2Q13324 411 aa15.37■□□□□ 0.05
CPSF4-208ENST00000452047 PKN2Q16513 984 aaKnown RBP15.37■□□□□ 0.05
CPSF4-208ENST00000452047 GORABQ5T7V8 394 aa15.37■□□□□ 0.05
CPSF4-208ENST00000452047 OTUD7BQ6GQQ9 843 aa15.37■□□□□ 0.05
CPSF4-208ENST00000452047 ERICH6Q7L0X2 663 aa15.37■□□□□ 0.05
CPSF4-208ENST00000452047 ERO1BQ86YB8 467 aa15.37■□□□□ 0.05
CPSF4-208ENST00000452047 SLF2Q8IX21 1173 aa15.37■□□□□ 0.05
CPSF4-208ENST00000452047 ZNF112Q9UJU3 913 aa15.37■□□□□ 0.05
CPSF4-208ENST00000452047 MYO5AQ9Y4I1 1855 aaKnown RBP15.37■□□□□ 0.05
CPSF4-208ENST00000452047 ENTPD3O75355 529 aa15.36■□□□□ 0.05
CPSF4-208ENST00000452047 SURF6O75683 361 aaKnown RBP15.36■□□□□ 0.05
CPSF4-208ENST00000452047 WDHD1O75717 1129 aaPredicted RBP15.36■□□□□ 0.05
CPSF4-208ENST00000452047 UQCRFS1P1P0C7P4 283 aa15.36■□□□□ 0.05
CPSF4-208ENST00000452047 INPP5BP32019 993 aa15.36■□□□□ 0.05
CPSF4-208ENST00000452047 BTDP43251 543 aa15.36■□□□□ 0.05
CPSF4-208ENST00000452047 RGS3P49796 1198 aa15.36■□□□□ 0.05
CPSF4-208ENST00000452047 CEP85Q6P2H3 762 aa15.36■□□□□ 0.05
CPSF4-208ENST00000452047 TBC1D9Q6ZT07 1266 aa15.36■□□□□ 0.05
CPSF4-208ENST00000452047 NSUN4Q96CB9 384 aaKnown RBP15.36■□□□□ 0.05
CPSF4-208ENST00000452047 DBNDD2Q9BQY9 259 aa15.36■□□□□ 0.05
CPSF4-208ENST00000452047 GPR75-ASB3A0A0A6YYF3 556 aa15.35■□□□□ 0.05
CPSF4-208ENST00000452047 CCL15-CCL14A0A0B4J2E2 113 aa15.35■□□□□ 0.05
CPSF4-208ENST00000452047 IRF6O14896 467 aa15.35■□□□□ 0.05
CPSF4-208ENST00000452047 RHBDL3P58872 404 aa15.35■□□□□ 0.05
CPSF4-208ENST00000452047 PPIL2Q13356 520 aa15.35■□□□□ 0.05
CPSF4-208ENST00000452047 OS9Q13438 667 aaPredicted RBP15.35■□□□□ 0.05
CPSF4-208ENST00000452047 CCL15Q16663 113 aa15.35■□□□□ 0.05
CPSF4-208ENST00000452047 SH3BP5LQ7L8J4 393 aa15.35■□□□□ 0.05
CPSF4-208ENST00000452047 DDX4Q9NQI0 724 aaKnown RBP15.35■□□□□ 0.05
CPSF4-208ENST00000452047 HPS5Q9UPZ3 1129 aa15.35■□□□□ 0.05
CPSF4-208ENST00000452047 CDK5RAP2Q96SN8 1893 aa15.34■□□□□ 0.05
CPSF4-208ENST00000452047 NOL9Q5SY16 702 aaKnown RBP15.34■□□□□ 0.05
CPSF4-208ENST00000452047 FBXO46Q6PJ61 603 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms