RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 TACC3Q9Y6A5 838 aa14.09□□□□□ -0.15
COL27A1-202ENST00000451716 A0A087WWV3 80 aa14.09□□□□□ -0.15
COL27A1-202ENST00000451716 MMP14P50281 582 aa14.09□□□□□ -0.15
COL27A1-202ENST00000451716 MICU3Q86XE3 530 aa14.09□□□□□ -0.15
COL27A1-202ENST00000451716 CCAR1Q8IX12 1150 aaKnown RBP14.09□□□□□ -0.15
COL27A1-202ENST00000451716 TTC12Q9H892 705 aaPredicted RBP14.09□□□□□ -0.15
COL27A1-202ENST00000451716 RCOR1Q9UKL0 485 aa14.09□□□□□ -0.15
COL27A1-202ENST00000451716 NRAPQ86VF7 1730 aa14.09□□□□□ -0.15
COL27A1-202ENST00000451716 GYG1P46976 350 aa14.08□□□□□ -0.15
COL27A1-202ENST00000451716 ME1P48163 572 aa14.08□□□□□ -0.15
COL27A1-202ENST00000451716 IFNL3Q8IZI9 196 aa14.08□□□□□ -0.15
COL27A1-202ENST00000451716 LCORLQ8N3X6 602 aa14.08□□□□□ -0.15
COL27A1-202ENST00000451716 NAPBQ9H115 298 aa14.08□□□□□ -0.15
COL27A1-202ENST00000451716 ANGEL1Q9UNK9 670 aaKnown RBP14.08□□□□□ -0.15
COL27A1-202ENST00000451716 BARGINQ6ZT62 677 aa14.08□□□□□ -0.16
COL27A1-202ENST00000451716 ERCC4Q92889 916 aaPredicted RBP14.08□□□□□ -0.16
COL27A1-202ENST00000451716 PHKBQ93100 1093 aa14.08□□□□□ -0.16
COL27A1-202ENST00000451716 ABCF2Q9UG63 623 aa14.08□□□□□ -0.16
COL27A1-202ENST00000451716 ATRNO75882 1429 aa14.08□□□□□ -0.16
COL27A1-202ENST00000451716 UBE2Q2LH0YL09 131 aa14.08□□□□□ -0.16
COL27A1-202ENST00000451716 RRP12Q5JTH9 1297 aaKnown RBP14.08□□□□□ -0.16
COL27A1-202ENST00000451716 SPC24Q8NBT2 197 aa14.08□□□□□ -0.16
COL27A1-202ENST00000451716 LRP2BPQ9P2M1 347 aa14.08□□□□□ -0.16
COL27A1-202ENST00000451716 SH2B2O14492 632 aaPredicted RBP14.07□□□□□ -0.16
COL27A1-202ENST00000451716 DHX16O60231 1041 aaKnown RBP14.07□□□□□ -0.16
COL27A1-202ENST00000451716 CDC27P30260 824 aa14.07□□□□□ -0.16
COL27A1-202ENST00000451716 FAM200AQ8TCP9 573 aa14.07□□□□□ -0.16
COL27A1-202ENST00000451716 NGLY1Q96IV0 654 aa14.07□□□□□ -0.16
COL27A1-202ENST00000451716 GTPBP4Q9BZE4 634 aaKnown RBP14.07□□□□□ -0.16
COL27A1-202ENST00000451716 DNAJC25Q9H1X3 360 aa14.07□□□□□ -0.16
COL27A1-202ENST00000451716 TOMM22Q9NS69 142 aa14.07□□□□□ -0.16
COL27A1-202ENST00000451716 CLIC4Q9Y696 253 aa14.07□□□□□ -0.16
COL27A1-202ENST00000451716 LRP5O75197 1615 aa14.07□□□□□ -0.16
COL27A1-202ENST00000451716 TAF1P21675 1872 aa14.07□□□□□ -0.16
COL27A1-202ENST00000451716 GSG1L2A8MUP6 293 aa14.07□□□□□ -0.16
COL27A1-202ENST00000451716 KIF28PB7ZC32 967 aa14.07□□□□□ -0.16
COL27A1-202ENST00000451716 METAP2P50579 478 aaKnown RBP eCLIP14.07□□□□□ -0.16
COL27A1-202ENST00000451716 NFXL1Q6ZNB6 911 aa14.07□□□□□ -0.16
COL27A1-202ENST00000451716 FBXO18Q8NFZ0 1043 aa14.07□□□□□ -0.16
COL27A1-202ENST00000451716 ZNF396Q96N95 335 aaPredicted RBP14.07□□□□□ -0.16
COL27A1-202ENST00000451716 ZKSCAN3Q9BRR0 538 aa14.07□□□□□ -0.16
COL27A1-202ENST00000451716 CBX8Q9HC52 389 aa14.07□□□□□ -0.16
COL27A1-202ENST00000451716 ZSWIM5Q9P217 1185 aa14.07□□□□□ -0.16
COL27A1-202ENST00000451716 CGNQ9P2M7 1197 aaKnown RBP14.07□□□□□ -0.16
COL27A1-202ENST00000451716 SMIM22K7EJ46 135 aa14.06□□□□□ -0.16
COL27A1-202ENST00000451716 APOA5Q6Q788 366 aa14.06□□□□□ -0.16
COL27A1-202ENST00000451716 ADGRA1Q86SQ6 560 aa14.06□□□□□ -0.16
COL27A1-202ENST00000451716 SMARCC1Q92922 1105 aaPredicted RBP14.06□□□□□ -0.16
COL27A1-202ENST00000451716 ZNF652Q9Y2D9 606 aa14.06□□□□□ -0.16
COL27A1-202ENST00000451716 SLC4A4Q9Y6R1 1079 aa14.06□□□□□ -0.16
COL27A1-202ENST00000451716 LTBP4Q8N2S1 1624 aa14.06□□□□□ -0.16
COL27A1-202ENST00000451716 DDX60Q8IY21 1712 aaKnown RBP14.06□□□□□ -0.16
COL27A1-202ENST00000451716 ZNF500O60304 480 aaPredicted RBP14.06□□□□□ -0.16
COL27A1-202ENST00000451716 TAF3Q5VWG9 929 aa14.06□□□□□ -0.16
COL27A1-202ENST00000451716 SASS6Q6UVJ0 657 aa14.06□□□□□ -0.16
COL27A1-202ENST00000451716 MTERF4Q7Z6M4 381 aaKnown RBP14.06□□□□□ -0.16
COL27A1-202ENST00000451716 C17orf53Q8N3J3 647 aaPredicted RBP14.06□□□□□ -0.16
COL27A1-202ENST00000451716 IGDCC4Q8TDY8 1250 aa14.06□□□□□ -0.16
COL27A1-202ENST00000451716 SRP68Q9UHB9 627 aaKnown RBP14.06□□□□□ -0.16
COL27A1-202ENST00000451716 TDO2P48775 406 aa14.05□□□□□ -0.16
COL27A1-202ENST00000451716 SNW1Q13573 536 aaKnown RBP14.05□□□□□ -0.16
COL27A1-202ENST00000451716 TMEM67Q5HYA8 995 aa14.05□□□□□ -0.16
COL27A1-202ENST00000451716 TBC1D9BQ66K14 1250 aa14.05□□□□□ -0.16
COL27A1-202ENST00000451716 FBXW7Q969H0 707 aa14.05□□□□□ -0.16
COL27A1-202ENST00000451716 PCDHA7Q9UN72 937 aa14.05□□□□□ -0.16
COL27A1-202ENST00000451716 OFD1O75665 1012 aa14.05□□□□□ -0.16
COL27A1-202ENST00000451716 PSEN1P49768 467 aa14.05□□□□□ -0.16
COL27A1-202ENST00000451716 RBM43Q6ZSC3 357 aaKnown RBP14.05□□□□□ -0.16
COL27A1-202ENST00000451716 ANKRD18AQ8IVF6 992 aa14.05□□□□□ -0.16
COL27A1-202ENST00000451716 FSIP1Q8NA03 581 aa14.05□□□□□ -0.16
COL27A1-202ENST00000451716 SDR42E1Q8WUS8 393 aa14.05□□□□□ -0.16
COL27A1-202ENST00000451716 CELF1Q92879 486 aaKnown RBP14.05□□□□□ -0.16
COL27A1-202ENST00000451716 CHMP4CQ96CF2 233 aa14.05□□□□□ -0.16
COL27A1-202ENST00000451716 EP400Q96L91 3159 aa14.05□□□□□ -0.16
COL27A1-202ENST00000451716 A0A1B0GVL5 298 aa14.05□□□□□ -0.16
COL27A1-202ENST00000451716 CDC5LQ99459 802 aaKnown RBP14.05□□□□□ -0.16
COL27A1-202ENST00000451716 LY9Q9HBG7 655 aa14.05□□□□□ -0.16
COL27A1-202ENST00000451716 ZMYM6O95789 1325 aa14.04□□□□□ -0.16
COL27A1-202ENST00000451716 IFIT3O14879 490 aaKnown RBP14.04□□□□□ -0.16
COL27A1-202ENST00000451716 CYP7A1P22680 504 aa14.04□□□□□ -0.16
COL27A1-202ENST00000451716 CCDC73Q6ZRK6 1079 aa14.04□□□□□ -0.16
COL27A1-202ENST00000451716 FAM43BQ6ZT52 329 aaPredicted RBP14.04□□□□□ -0.16
COL27A1-202ENST00000451716 ZBTB43O43298 467 aa14.04□□□□□ -0.16
COL27A1-202ENST00000451716 ZNF165P49910 485 aa14.04□□□□□ -0.16
COL27A1-202ENST00000451716 STK38Q15208 465 aa14.04□□□□□ -0.16
COL27A1-202ENST00000451716 SF3A1Q15459 793 aaKnown RBP14.04□□□□□ -0.16
COL27A1-202ENST00000451716 CCDC82Q8N4S0 544 aa14.04□□□□□ -0.16
COL27A1-202ENST00000451716 ALG1Q9BT22 464 aa14.04□□□□□ -0.16
COL27A1-202ENST00000451716 RAI14Q9P0K7 980 aa14.04□□□□□ -0.16
COL27A1-202ENST00000451716 WDR19Q8NEZ3 1342 aa14.04□□□□□ -0.16
COL27A1-202ENST00000451716 KLRK1P26718 216 aa14.03□□□□□ -0.16
COL27A1-202ENST00000451716 ALX1Q15699 326 aa14.03□□□□□ -0.16
COL27A1-202ENST00000451716 AMIGO3Q86WK7 504 aa14.03□□□□□ -0.16
COL27A1-202ENST00000451716 LINC00301Q8NCQ3 95 aa14.03□□□□□ -0.16
COL27A1-202ENST00000451716 BCL2L12Q9HB09 334 aa14.03□□□□□ -0.16
COL27A1-202ENST00000451716 R3HCC1Q9Y3T6 440 aaKnown RBP14.03□□□□□ -0.16
COL27A1-202ENST00000451716 MINDY4BA8MYZ0 360 aa14.03□□□□□ -0.16
COL27A1-202ENST00000451716 KIF23Q02241 960 aaPredicted RBP14.03□□□□□ -0.16
COL27A1-202ENST00000451716 AKNAD1Q5T1N1 836 aa14.03□□□□□ -0.16
COL27A1-202ENST00000451716 MYSM1Q5VVJ2 828 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms