RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 HSPA1AP0DMV8 641 aaKnown RBP18.16■□□□□ 0.5
HDAC4-204ENST00000446876 HSPA1BP0DMV9 641 aaKnown RBP18.16■□□□□ 0.5
HDAC4-204ENST00000446876 ZNF157P51786 506 aaPredicted RBP18.16■□□□□ 0.5
HDAC4-204ENST00000446876 FKBP1BP68106 108 aa18.16■□□□□ 0.5
HDAC4-204ENST00000446876 ZNF512BQ96KM6 892 aaPredicted RBP18.16■□□□□ 0.5
HDAC4-204ENST00000446876 TEPSINQ96N21 525 aa18.16■□□□□ 0.5
HDAC4-204ENST00000446876 ZIC5Q96T25 663 aa18.16■□□□□ 0.5
HDAC4-204ENST00000446876 PIH1D3Q9NQM4 214 aaKnown RBP18.16■□□□□ 0.5
HDAC4-204ENST00000446876 ANGEL1Q9UNK9 670 aaKnown RBP18.16■□□□□ 0.5
HDAC4-204ENST00000446876 SUPT16HQ9Y5B9 1047 aaKnown RBP18.16■□□□□ 0.5
HDAC4-204ENST00000446876 DOCK2Q92608 1830 aa18.16■□□□□ 0.5
HDAC4-204ENST00000446876 FAM155AB1AL88 458 aaPredicted RBP18.15■□□□□ 0.5
HDAC4-204ENST00000446876 IFIT2P09913 472 aaKnown RBP18.15■□□□□ 0.5
HDAC4-204ENST00000446876 TNNI2P48788 182 aa18.15■□□□□ 0.5
HDAC4-204ENST00000446876 NFIAQ12857 509 aa18.15■□□□□ 0.5
HDAC4-204ENST00000446876 NSUN4Q96CB9 384 aaKnown RBP18.15■□□□□ 0.5
HDAC4-204ENST00000446876 USP40Q9NVE5 1235 aa18.15■□□□□ 0.5
HDAC4-204ENST00000446876 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.15■□□□□ 0.5
HDAC4-204ENST00000446876 LRP2BPQ9P2M1 347 aa18.15■□□□□ 0.5
HDAC4-204ENST00000446876 MROH7-TTC4A0A0A0MT08 1334 aa18.15■□□□□ 0.5
HDAC4-204ENST00000446876 BTDP43251 543 aa18.14■□□□□ 0.49
HDAC4-204ENST00000446876 RASAL3Q86YV0 1011 aa18.14■□□□□ 0.49
HDAC4-204ENST00000446876 LRRCC1Q9C099 1032 aa18.14■□□□□ 0.49
HDAC4-204ENST00000446876 DCTPP1Q9H773 170 aa18.14■□□□□ 0.49
HDAC4-204ENST00000446876 TCP10Q12799 353 aa18.13■□□□□ 0.49
HDAC4-204ENST00000446876 SUPT20HL1Q3ZLR7 823 aa18.13■□□□□ 0.49
HDAC4-204ENST00000446876 ARMC9Q7Z3E5 817 aa18.13■□□□□ 0.49
HDAC4-204ENST00000446876 ANTXR1Q9H6X2 564 aa18.13■□□□□ 0.49
HDAC4-204ENST00000446876 CDK5RAP2Q96SN8 1893 aa18.12■□□□□ 0.49
HDAC4-204ENST00000446876 SLC10A3P09131 477 aa18.12■□□□□ 0.49
HDAC4-204ENST00000446876 SLF2Q8IX21 1173 aa18.12■□□□□ 0.49
HDAC4-204ENST00000446876 EXOC6Q8TAG9 804 aa18.12■□□□□ 0.49
HDAC4-204ENST00000446876 FAM163AQ96GL9 167 aaPredicted RBP18.12■□□□□ 0.49
HDAC4-204ENST00000446876 FAM198AQ9UFP1 575 aa18.12■□□□□ 0.49
HDAC4-204ENST00000446876 RFX7Q2KHR2 1363 aa18.12■□□□□ 0.49
HDAC4-204ENST00000446876 USP2O75604 605 aaPredicted RBP18.11■□□□□ 0.49
HDAC4-204ENST00000446876 GSTO1P78417 241 aa18.11■□□□□ 0.49
HDAC4-204ENST00000446876 FKBP1CQ5VVH2 108 aa18.11■□□□□ 0.49
HDAC4-204ENST00000446876 NAA16Q6N069 864 aaPredicted RBP18.11■□□□□ 0.49
HDAC4-204ENST00000446876 ADGRA1Q86SQ6 560 aa18.11■□□□□ 0.49
HDAC4-204ENST00000446876 FAM83AQ86UY5 434 aa18.11■□□□□ 0.49
HDAC4-204ENST00000446876 ZFPM1Q8IX07 1006 aa18.11■□□□□ 0.49
HDAC4-204ENST00000446876 CLMNQ96JQ2 1002 aa18.11■□□□□ 0.49
HDAC4-204ENST00000446876 RPAP1Q9BWH6 1393 aaPredicted RBP18.1■□□□□ 0.49
HDAC4-204ENST00000446876 GPR75-ASB3A0A0A6YYF3 556 aa18.1■□□□□ 0.49
HDAC4-204ENST00000446876 PPP1R12BO60237 982 aaPredicted RBP18.1■□□□□ 0.49
HDAC4-204ENST00000446876 IDH1O75874 414 aaKnown RBP18.1■□□□□ 0.49
HDAC4-204ENST00000446876 MAP2K2P36507 400 aa18.1■□□□□ 0.49
HDAC4-204ENST00000446876 RGS3P49796 1198 aa18.1■□□□□ 0.49
HDAC4-204ENST00000446876 IRX6P78412 446 aaPredicted RBP18.1■□□□□ 0.49
HDAC4-204ENST00000446876 MKRN3Q13064 507 aaKnown RBP18.1■□□□□ 0.49
HDAC4-204ENST00000446876 NOGQ13253 232 aa18.1■□□□□ 0.49
HDAC4-204ENST00000446876 LDLRAD1Q5T700 205 aa18.1■□□□□ 0.49
HDAC4-204ENST00000446876 CCDC102AQ96A19 550 aa18.1■□□□□ 0.49
HDAC4-204ENST00000446876 DNAJC2Q99543 621 aaKnown RBP18.1■□□□□ 0.49
HDAC4-204ENST00000446876 DDX4Q9NQI0 724 aaKnown RBP18.1■□□□□ 0.49
HDAC4-204ENST00000446876 WBP1LQ9NX94 342 aa18.1■□□□□ 0.49
HDAC4-204ENST00000446876 FOXN1O15353 648 aa18.09■□□□□ 0.49
HDAC4-204ENST00000446876 WDHD1O75717 1129 aaPredicted RBP18.09■□□□□ 0.49
HDAC4-204ENST00000446876 LDHCP07864 332 aa18.09■□□□□ 0.49
HDAC4-204ENST00000446876 RHBDL3P58872 404 aa18.09■□□□□ 0.49
HDAC4-204ENST00000446876 KIF23Q02241 960 aaPredicted RBP18.09■□□□□ 0.49
HDAC4-204ENST00000446876 PICALMQ13492 652 aa18.09■□□□□ 0.49
HDAC4-204ENST00000446876 MAP3K11Q16584 847 aa18.09■□□□□ 0.49
HDAC4-204ENST00000446876 FAM151AQ8WW52 585 aa18.09■□□□□ 0.49
HDAC4-204ENST00000446876 EDC3Q96F86 508 aaKnown RBP18.09■□□□□ 0.49
HDAC4-204ENST00000446876 FOCADQ5VW36 1801 aa18.08■□□□□ 0.48
HDAC4-204ENST00000446876 IREB2P48200 963 aaKnown RBP18.08■□□□□ 0.48
HDAC4-204ENST00000446876 MAP2K1Q02750 393 aaPredicted RBP18.08■□□□□ 0.48
HDAC4-204ENST00000446876 BOLA2Q9H3K6 86 aa18.08■□□□□ 0.48
HDAC4-204ENST00000446876 AATFQ9NY61 560 aaKnown RBP eCLIP18.08■□□□□ 0.48
HDAC4-204ENST00000446876 GOLIM4O00461 696 aa18.07■□□□□ 0.48
HDAC4-204ENST00000446876 TSHZ3Q63HK5 1081 aa18.07■□□□□ 0.48
HDAC4-204ENST00000446876 MIGA2Q7L4E1 593 aa18.07■□□□□ 0.48
HDAC4-204ENST00000446876 MAGEB6Q8N7X4 407 aa18.07■□□□□ 0.48
HDAC4-204ENST00000446876 SH3RF3Q8TEJ3 882 aaPredicted RBP18.07■□□□□ 0.48
HDAC4-204ENST00000446876 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.07■□□□□ 0.48
HDAC4-204ENST00000446876 AIDAQ96BJ3 306 aa18.07■□□□□ 0.48
HDAC4-204ENST00000446876 IDI2Q9BXS1 227 aa18.07■□□□□ 0.48
HDAC4-204ENST00000446876 TSKSQ9UJT2 592 aa18.07■□□□□ 0.48
HDAC4-204ENST00000446876 MYH7P12883 1935 aa18.07■□□□□ 0.48
HDAC4-204ENST00000446876 ATP5JP18859 108 aa18.06■□□□□ 0.48
HDAC4-204ENST00000446876 CYP7A1P22680 504 aa18.06■□□□□ 0.48
HDAC4-204ENST00000446876 SH3BP5LQ7L8J4 393 aa18.06■□□□□ 0.48
HDAC4-204ENST00000446876 ENTPD3O75355 529 aa18.05■□□□□ 0.48
HDAC4-204ENST00000446876 SLURP2P0DP57 97 aa18.05■□□□□ 0.48
HDAC4-204ENST00000446876 DYNLL1P63167 89 aaKnown RBP18.05■□□□□ 0.48
HDAC4-204ENST00000446876 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.05■□□□□ 0.48
HDAC4-204ENST00000446876 TEX11Q8IYF3 940 aa18.05■□□□□ 0.48
HDAC4-204ENST00000446876 ANKRD13AQ8IZ07 590 aa18.05■□□□□ 0.48
HDAC4-204ENST00000446876 MIGA1Q8NAN2 632 aa18.05■□□□□ 0.48
HDAC4-204ENST00000446876 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.05■□□□□ 0.48
HDAC4-204ENST00000446876 OTUD7AQ8TE49 926 aaPredicted RBP18.05■□□□□ 0.48
HDAC4-204ENST00000446876 SLC10A4Q96EP9 437 aa18.05■□□□□ 0.48
HDAC4-204ENST00000446876 NOL10Q9BSC4 688 aaKnown RBP18.05■□□□□ 0.48
HDAC4-204ENST00000446876 ELP3Q9H9T3 547 aa18.05■□□□□ 0.48
HDAC4-204ENST00000446876 DDTLA6NHG4 134 aaPredicted RBP18.04■□□□□ 0.48
HDAC4-204ENST00000446876 MAP3K12Q12852 859 aa18.04■□□□□ 0.48
HDAC4-204ENST00000446876 HDAC1Q13547 482 aaPredicted RBP18.04■□□□□ 0.48
HDAC4-204ENST00000446876 VGLL4Q14135 290 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms