RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 TRPC3Q13507 836 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 SV2BQ7L1I2 683 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 CDC37L1Q7L3B6 337 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 OTUD6AQ7L8S5 288 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 EEF2P13639 858 aaKnown RBP13.18□□□□□ -0.3
FN1-212ENST00000446046 AFMP43652 599 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 MRPS27Q92552 414 aaKnown RBP13.18□□□□□ -0.3
FN1-212ENST00000446046 TEKT1Q969V4 418 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 MEIS3Q99687 375 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 WDR70Q9NW82 654 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 PAXBP1Q9Y5B6 917 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 HMGB1P1B2RPK0 211 aaPredicted RBP13.18□□□□□ -0.3
FN1-212ENST00000446046 TACC1O75410 805 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 SLC52A2Q9HAB3 445 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 MPNDQ8N594 471 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 CNKSR1Q969H4 720 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 DCPSQ96C86 337 aaKnown RBP13.18□□□□□ -0.3
FN1-212ENST00000446046 POLKQ9UBT6 870 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 UGGT1Q9NYU2 1555 aa13.18□□□□□ -0.3
FN1-212ENST00000446046 SDSP20132 328 aa13.17□□□□□ -0.3
FN1-212ENST00000446046 CTAGE9A4FU28 777 aa13.17□□□□□ -0.3
FN1-212ENST00000446046 LPIN2Q92539 896 aa13.17□□□□□ -0.3
FN1-212ENST00000446046 DNA2P51530 1060 aa13.17□□□□□ -0.3
FN1-212ENST00000446046 NSMCE1Q8WV22 266 aa13.17□□□□□ -0.3
FN1-212ENST00000446046 BRF1Q92994 677 aa13.17□□□□□ -0.3
FN1-212ENST00000446046 IWS1Q96ST2 819 aa13.17□□□□□ -0.3
FN1-212ENST00000446046 CGNQ9P2M7 1197 aaKnown RBP13.17□□□□□ -0.3
FN1-212ENST00000446046 MTUS1Q9ULD2 1270 aa13.17□□□□□ -0.3
FN1-212ENST00000446046 RTL1A6NKG5 1358 aa13.17□□□□□ -0.3
FN1-212ENST00000446046 MYO10Q9HD67 2058 aa13.17□□□□□ -0.3
FN1-212ENST00000446046 PPIP5K2O43314 1243 aa13.17□□□□□ -0.3
FN1-212ENST00000446046 ZSCAN30Q86W11 494 aa13.17□□□□□ -0.3
FN1-212ENST00000446046 UQCRHLA0A096LP55 91 aa13.17□□□□□ -0.3
FN1-212ENST00000446046 UQCRHP07919 91 aa13.17□□□□□ -0.3
FN1-212ENST00000446046 SNW1Q13573 536 aaKnown RBP13.17□□□□□ -0.3
FN1-212ENST00000446046 SULF1Q8IWU6 871 aa13.17□□□□□ -0.3
FN1-212ENST00000446046 TBC1D31Q96DN5 1066 aa13.17□□□□□ -0.3
FN1-212ENST00000446046 MCM7P33993 719 aa13.17□□□□□ -0.3
FN1-212ENST00000446046 SLC1A4P43007 532 aa13.17□□□□□ -0.3
FN1-212ENST00000446046 TTC14Q96N46 770 aa13.17□□□□□ -0.3
FN1-212ENST00000446046 GOLGA4Q13439 2230 aaKnown RBP13.16□□□□□ -0.3
FN1-212ENST00000446046 ANXA1P04083 346 aa13.16□□□□□ -0.3
FN1-212ENST00000446046 CLUL1Q15846 466 aa13.16□□□□□ -0.3
FN1-212ENST00000446046 SPOUT1Q5T280 376 aaKnown RBP13.16□□□□□ -0.3
FN1-212ENST00000446046 DPH6Q7L8W6 267 aa13.16□□□□□ -0.3
FN1-212ENST00000446046 BIN1O00499 593 aa13.16□□□□□ -0.3
FN1-212ENST00000446046 GNPTABQ3T906 1256 aa13.16□□□□□ -0.3
FN1-212ENST00000446046 MRPL50Q8N5N7 158 aaKnown RBP13.16□□□□□ -0.3
FN1-212ENST00000446046 CPLX3Q8WVH0 158 aa13.16□□□□□ -0.3
FN1-212ENST00000446046 LLPHQ9BRT6 129 aaKnown RBP13.16□□□□□ -0.3
FN1-212ENST00000446046 EAPPQ56P03 285 aaPredicted RBP13.16□□□□□ -0.3
FN1-212ENST00000446046 TFIP11Q9UBB9 837 aaKnown RBP13.16□□□□□ -0.3
FN1-212ENST00000446046 BIRC2Q13490 618 aa13.16□□□□□ -0.3
FN1-212ENST00000446046 MTHFSDQ2M296 383 aaKnown RBP13.16□□□□□ -0.3
FN1-212ENST00000446046 TMC4Q7Z404 712 aa13.16□□□□□ -0.3
FN1-212ENST00000446046 CHURC1Q8WUH1 139 aa13.16□□□□□ -0.3
FN1-212ENST00000446046 SPTLC2O15270 562 aa13.16□□□□□ -0.3
FN1-212ENST00000446046 VIMP08670 466 aaKnown RBP13.16□□□□□ -0.3
FN1-212ENST00000446046 YWHAEP62258 255 aaKnown RBP13.16□□□□□ -0.3
FN1-212ENST00000446046 CCDC50Q8IVM0 306 aa13.16□□□□□ -0.3
FN1-212ENST00000446046 MIGA1Q8NAN2 632 aa13.16□□□□□ -0.3
FN1-212ENST00000446046 CCNT1O60563 726 aaKnown RBP13.15□□□□□ -0.3
FN1-212ENST00000446046 DEXIO95424 95 aa13.15□□□□□ -0.3
FN1-212ENST00000446046 MAP7D1Q3KQU3 841 aa13.15□□□□□ -0.3
FN1-212ENST00000446046 JARID2Q92833 1246 aaPredicted RBP13.15□□□□□ -0.3
FN1-212ENST00000446046 NBPF3Q9H094 633 aa13.15□□□□□ -0.3
FN1-212ENST00000446046 PTPDC1A2A3K4 754 aa13.15□□□□□ -0.3
FN1-212ENST00000446046 PRPF31Q8WWY3 499 aaKnown RBP13.15□□□□□ -0.3
FN1-212ENST00000446046 ZBTB21Q9ULJ3 1066 aa13.15□□□□□ -0.3
FN1-212ENST00000446046 ATP6V0A2Q9Y487 856 aa13.15□□□□□ -0.3
FN1-212ENST00000446046 AOX1Q06278 1338 aa13.15□□□□□ -0.3
FN1-212ENST00000446046 ARHGEF35A5YM69 484 aa13.15□□□□□ -0.3
FN1-212ENST00000446046 KIF11P52732 1056 aa13.15□□□□□ -0.3
FN1-212ENST00000446046 FAM196AQ6ZSG2 479 aa13.15□□□□□ -0.3
FN1-212ENST00000446046 ANKS4BQ8N8V4 417 aa13.15□□□□□ -0.3
FN1-212ENST00000446046 CEP152O94986 1710 aa13.15□□□□□ -0.3
FN1-212ENST00000446046 CLASP1Q7Z460 1538 aa13.15□□□□□ -0.3
FN1-212ENST00000446046 BLMP54132 1417 aaPredicted RBP13.15□□□□□ -0.3
FN1-212ENST00000446046 AGTPBP1Q9UPW5 1226 aa13.15□□□□□ -0.3
FN1-212ENST00000446046 KIFC2Q96AC6 838 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 LAMC1P11047 1609 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 ALDH3A1P30838 453 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 APPBP2Q92624 585 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 QRICH2Q9H0J4 1663 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 CARD10Q9BWT7 1032 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 MLH3Q9UHC1 1453 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 GOLGA6CA6NDK9 693 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 GOLGA6BA6NDN3 693 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 GOLGA6DP0CG33 693 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 CFAP57Q96MR6 1250 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 EYA1Q99502 592 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 GOLGA6AQ9NYA3 693 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 MAP3K19Q56UN5 1328 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 GMNNO75496 209 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 TFCP2Q12800 502 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 FAM169AQ9Y6X4 670 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 ADCY10Q96PN6 1610 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 RILPL1Q5EBL4 403 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 LIN9Q5TKA1 542 aa13.14□□□□□ -0.31
FN1-212ENST00000446046 RUFY3Q7L099 469 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms