RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 ERICH6Q7L0X2 663 aa29.29■■■□□ 2.28
C9orf3-207ENST00000445181 EXOC6Q8TAG9 804 aa29.29■■■□□ 2.28
C9orf3-207ENST00000445181 ZNF512BQ96KM6 892 aaPredicted RBP29.29■■■□□ 2.28
C9orf3-207ENST00000445181 ZDHHC15Q96MV8 337 aa29.29■■■□□ 2.28
C9orf3-207ENST00000445181 ECM29Q5VYK3 1845 aa29.29■■■□□ 2.28
C9orf3-207ENST00000445181 DIXDC1Q155Q3 683 aa29.28■■■□□ 2.28
C9orf3-207ENST00000445181 TBC1D9Q6ZT07 1266 aa29.28■■■□□ 2.28
C9orf3-207ENST00000445181 ZNF70Q9UC06 446 aaPredicted RBP29.28■■■□□ 2.28
C9orf3-207ENST00000445181 ANGEL1Q9UNK9 670 aaKnown RBP29.28■■■□□ 2.28
C9orf3-207ENST00000445181 SPDYE2Q495Y8 402 aa29.27■■■□□ 2.28
C9orf3-207ENST00000445181 REM2Q8IYK8 340 aaPredicted RBP29.27■■■□□ 2.28
C9orf3-207ENST00000445181 FZD1Q9UP38 647 aa29.27■■■□□ 2.28
C9orf3-207ENST00000445181 SMARCA5O60264 1052 aaPredicted RBP29.26■■■□□ 2.27
C9orf3-207ENST00000445181 RASA3Q14644 834 aa29.26■■■□□ 2.27
C9orf3-207ENST00000445181 SUPT20HL1Q3ZLR7 823 aa29.26■■■□□ 2.27
C9orf3-207ENST00000445181 LDLRAD1Q5T700 205 aa29.26■■■□□ 2.27
C9orf3-207ENST00000445181 SLF2Q8IX21 1173 aa29.26■■■□□ 2.27
C9orf3-207ENST00000445181 RNF186Q9NXI6 227 aa29.26■■■□□ 2.27
C9orf3-207ENST00000445181 RAI14Q9P0K7 980 aa29.26■■■□□ 2.27
C9orf3-207ENST00000445181 LRP2BPQ9P2M1 347 aa29.26■■■□□ 2.27
C9orf3-207ENST00000445181 TNFAIP1Q13829 316 aa29.25■■■□□ 2.27
C9orf3-207ENST00000445181 SAGE1Q9NXZ1 904 aa29.25■■■□□ 2.27
C9orf3-207ENST00000445181 TMOD2Q9NZR1 351 aa29.25■■■□□ 2.27
C9orf3-207ENST00000445181 TRPA1O75762 1119 aa29.24■■■□□ 2.27
C9orf3-207ENST00000445181 ZAP70P43403 619 aa29.24■■■□□ 2.27
C9orf3-207ENST00000445181 IRX6P78412 446 aaPredicted RBP29.24■■■□□ 2.27
C9orf3-207ENST00000445181 NBPF12Q5TAG4 269 aaPredicted RBP29.24■■■□□ 2.27
C9orf3-207ENST00000445181 APOBEC3HQ6NTF7 200 aaKnown RBP29.24■■■□□ 2.27
C9orf3-207ENST00000445181 DAGLAQ9Y4D2 1042 aa29.24■■■□□ 2.27
C9orf3-207ENST00000445181 PPP1R12BO60237 982 aaPredicted RBP29.23■■■□□ 2.27
C9orf3-207ENST00000445181 MECOMQ03112 1051 aa29.23■■■□□ 2.27
C9orf3-207ENST00000445181 TCP10L2B9ZVM9 353 aa29.22■■■□□ 2.27
C9orf3-207ENST00000445181 CYP2E1P05181 493 aaPredicted RBP29.22■■■□□ 2.27
C9orf3-207ENST00000445181 TNNI2P48788 182 aa29.22■■■□□ 2.27
C9orf3-207ENST00000445181 SSC5DA1L4H1 1573 aa29.22■■■□□ 2.27
C9orf3-207ENST00000445181 AKAP11Q9UKA4 1901 aa29.22■■■□□ 2.27
C9orf3-207ENST00000445181 GSTO1P78417 241 aa29.21■■■□□ 2.27
C9orf3-207ENST00000445181 MKRN3Q13064 507 aaKnown RBP29.21■■■□□ 2.27
C9orf3-207ENST00000445181 MAP3K11Q16584 847 aa29.21■■■□□ 2.27
C9orf3-207ENST00000445181 CACNB3P54284 484 aa29.2■■■□□ 2.26
C9orf3-207ENST00000445181 HDAC1Q13547 482 aaPredicted RBP29.2■■■□□ 2.26
C9orf3-207ENST00000445181 SLC10A4Q96EP9 437 aa29.2■■■□□ 2.26
C9orf3-207ENST00000445181 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.2■■■□□ 2.26
C9orf3-207ENST00000445181 ZBTB47Q9UFB7 747 aaPredicted RBP29.2■■■□□ 2.26
C9orf3-207ENST00000445181 MYH2Q9UKX2 1941 aa29.2■■■□□ 2.26
C9orf3-207ENST00000445181 NSUN4Q96CB9 384 aaKnown RBP29.19■■■□□ 2.26
C9orf3-207ENST00000445181 NDUFB9Q9Y6M9 179 aa29.19■■■□□ 2.26
C9orf3-207ENST00000445181 LDHCP07864 332 aa29.18■■■□□ 2.26
C9orf3-207ENST00000445181 CDC42EP5Q6NZY7 148 aa29.18■■■□□ 2.26
C9orf3-207ENST00000445181 USP40Q9NVE5 1235 aa29.18■■■□□ 2.26
C9orf3-207ENST00000445181 MROH7-TTC4A0A0A0MT08 1334 aa29.18■■■□□ 2.26
C9orf3-207ENST00000445181 GAKO14976 1311 aa29.18■■■□□ 2.26
C9orf3-207ENST00000445181 CASP8AP2Q9UKL3 1982 aa29.17■■■□□ 2.26
C9orf3-207ENST00000445181 USP2O75604 605 aaPredicted RBP29.17■■■□□ 2.26
C9orf3-207ENST00000445181 SPRYD7Q5W111 196 aa29.17■■■□□ 2.26
C9orf3-207ENST00000445181 ABHD8Q96I13 439 aa29.17■■■□□ 2.26
C9orf3-207ENST00000445181 DNAJC2Q99543 621 aaKnown RBP29.17■■■□□ 2.26
C9orf3-207ENST00000445181 RWDD1Q9H446 243 aaPredicted RBP29.17■■■□□ 2.26
C9orf3-207ENST00000445181 PIH1D3Q9NQM4 214 aaKnown RBP29.17■■■□□ 2.26
C9orf3-207ENST00000445181 BTDP43251 543 aa29.16■■■□□ 2.26
C9orf3-207ENST00000445181 IREB2P48200 963 aaKnown RBP29.16■■■□□ 2.26
C9orf3-207ENST00000445181 TM4SF4P48230 202 aa29.16■■■□□ 2.26
C9orf3-207ENST00000445181 NAA16Q6N069 864 aaPredicted RBP29.16■■■□□ 2.26
C9orf3-207ENST00000445181 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.16■■■□□ 2.26
C9orf3-207ENST00000445181 GCC1Q96CN9 775 aa29.16■■■□□ 2.26
C9orf3-207ENST00000445181 FAM163AQ96GL9 167 aaPredicted RBP29.16■■■□□ 2.26
C9orf3-207ENST00000445181 CLMNQ96JQ2 1002 aa29.16■■■□□ 2.26
C9orf3-207ENST00000445181 TEPSINQ96N21 525 aa29.16■■■□□ 2.26
C9orf3-207ENST00000445181 TMEM39BQ9GZU3 492 aa29.16■■■□□ 2.26
C9orf3-207ENST00000445181 UNCXA6NJT0 531 aa29.15■■■□□ 2.26
C9orf3-207ENST00000445181 IDH1O75874 414 aaKnown RBP29.15■■■□□ 2.26
C9orf3-207ENST00000445181 ZNF384Q8TF68 577 aa29.15■■■□□ 2.26
C9orf3-207ENST00000445181 GPATCH3Q96I76 525 aa29.15■■■□□ 2.26
C9orf3-207ENST00000445181 SREBF2Q12772 1141 aa29.14■■■□□ 2.26
C9orf3-207ENST00000445181 TTF1Q15361 905 aaPredicted RBP29.14■■■□□ 2.26
C9orf3-207ENST00000445181 FKBP1CQ5VVH2 108 aa29.14■■■□□ 2.26
C9orf3-207ENST00000445181 CDAN1Q8IWY9 1227 aa29.14■■■□□ 2.26
C9orf3-207ENST00000445181 NOL10Q9BSC4 688 aaKnown RBP29.14■■■□□ 2.26
C9orf3-207ENST00000445181 ATP5JP18859 108 aa29.13■■■□□ 2.25
C9orf3-207ENST00000445181 ANKRD45Q5TZF3 282 aa29.13■■■□□ 2.25
C9orf3-207ENST00000445181 BOLA2Q9H3K6 86 aa29.13■■■□□ 2.25
C9orf3-207ENST00000445181 ANTXR1Q9H6X2 564 aa29.13■■■□□ 2.25
C9orf3-207ENST00000445181 IGSF3O75054 1194 aa29.12■■■□□ 2.25
C9orf3-207ENST00000445181 MAP3K12Q12852 859 aa29.12■■■□□ 2.25
C9orf3-207ENST00000445181 FAM83AQ86UY5 434 aa29.12■■■□□ 2.25
C9orf3-207ENST00000445181 ANKRD13AQ8IZ07 590 aa29.12■■■□□ 2.25
C9orf3-207ENST00000445181 ECHDC1Q9NTX5 307 aa29.12■■■□□ 2.25
C9orf3-207ENST00000445181 GPR75-ASB3A0A0A6YYF3 556 aa29.11■■■□□ 2.25
C9orf3-207ENST00000445181 GOLIM4O00461 696 aa29.11■■■□□ 2.25
C9orf3-207ENST00000445181 DGKZQ13574 1117 aa29.11■■■□□ 2.25
C9orf3-207ENST00000445181 WNK4Q96J92 1243 aa29.11■■■□□ 2.25
C9orf3-207ENST00000445181 MCOLN1Q9GZU1 580 aa29.11■■■□□ 2.25
C9orf3-207ENST00000445181 MAST2Q6P0Q8 1798 aa29.11■■■□□ 2.25
C9orf3-207ENST00000445181 TCP10Q12799 353 aa29.1■■■□□ 2.25
C9orf3-207ENST00000445181 MYO5AQ9Y4I1 1855 aaKnown RBP29.1■■■□□ 2.25
C9orf3-207ENST00000445181 TBC1D8O95759 1140 aa29.09■■■□□ 2.25
C9orf3-207ENST00000445181 ZBTB48P10074 688 aaPredicted RBP29.09■■■□□ 2.25
C9orf3-207ENST00000445181 NFIAQ12857 509 aa29.09■■■□□ 2.25
C9orf3-207ENST00000445181 PAG1Q9NWQ8 432 aa29.09■■■□□ 2.25
C9orf3-207ENST00000445181 MANSC4A6NHS7 340 aaPredicted RBP29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms