RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 MYPNQ86TC9 1320 aa11.57□□□□□ -0.56
LINC00642-203ENST00000444942 MYO3BQ8WXR4 1341 aa11.57□□□□□ -0.56
LINC00642-203ENST00000444942 IPO8O15397 1037 aaKnown RBP11.57□□□□□ -0.56
LINC00642-203ENST00000444942 TRIM27P14373 513 aa11.57□□□□□ -0.56
LINC00642-203ENST00000444942 ITGA6P23229 1130 aa11.57□□□□□ -0.56
LINC00642-203ENST00000444942 PSMC4P43686 418 aa11.57□□□□□ -0.56
LINC00642-203ENST00000444942 GTF2A2P52657 109 aa11.57□□□□□ -0.56
LINC00642-203ENST00000444942 LMBR1LQ6UX01 489 aa11.57□□□□□ -0.56
LINC00642-203ENST00000444942 HELBQ8NG08 1087 aaPredicted RBP11.57□□□□□ -0.56
LINC00642-203ENST00000444942 CNKSR2Q8WXI2 1034 aa11.57□□□□□ -0.56
LINC00642-203ENST00000444942 GGA1Q9UJY5 639 aa11.57□□□□□ -0.56
LINC00642-203ENST00000444942 PPP2R3BQ9Y5P8 575 aa11.57□□□□□ -0.56
LINC00642-203ENST00000444942 CCT4P50991 539 aaKnown RBP11.56□□□□□ -0.56
LINC00642-203ENST00000444942 SUPT20HL1Q3ZLR7 823 aa11.56□□□□□ -0.56
LINC00642-203ENST00000444942 DACT2Q5SW24 774 aa11.56□□□□□ -0.56
LINC00642-203ENST00000444942 ZKSCAN2Q63HK3 967 aa11.56□□□□□ -0.56
LINC00642-203ENST00000444942 ATF7IPQ6VMQ6 1270 aa11.56□□□□□ -0.56
LINC00642-203ENST00000444942 ZNF594Q96JF6 807 aaPredicted RBP11.56□□□□□ -0.56
LINC00642-203ENST00000444942 CDC5LQ99459 802 aaKnown RBP11.56□□□□□ -0.56
LINC00642-203ENST00000444942 MXD3Q9BW11 206 aa11.56□□□□□ -0.56
LINC00642-203ENST00000444942 PLA2G12BQ9BX93 195 aa11.56□□□□□ -0.56
LINC00642-203ENST00000444942 CRISPLD2Q9H0B8 497 aa11.56□□□□□ -0.56
LINC00642-203ENST00000444942 USP44Q9H0E7 712 aa11.56□□□□□ -0.56
LINC00642-203ENST00000444942 BICC1Q9H694 974 aaKnown RBP11.56□□□□□ -0.56
LINC00642-203ENST00000444942 ELP3Q9H9T3 547 aa11.56□□□□□ -0.56
LINC00642-203ENST00000444942 ZCCHC17Q9NP64 241 aaKnown RBP11.56□□□□□ -0.56
LINC00642-203ENST00000444942 A0A1B0GUL6 1792 aa11.56□□□□□ -0.56
LINC00642-203ENST00000444942 DDX60LQ5H9U9 1706 aaKnown RBP11.56□□□□□ -0.56
LINC00642-203ENST00000444942 ANKRD18BA2A2Z9 1011 aa11.55□□□□□ -0.56
LINC00642-203ENST00000444942 PLIN1O60240 522 aa11.55□□□□□ -0.56
LINC00642-203ENST00000444942 IGHMBP2P38935 993 aaKnown RBP11.55□□□□□ -0.56
LINC00642-203ENST00000444942 IFIT5Q13325 482 aaKnown RBP11.55□□□□□ -0.56
LINC00642-203ENST00000444942 TAF7LQ5H9L4 462 aa11.55□□□□□ -0.56
LINC00642-203ENST00000444942 B4GALNT3Q6L9W6 998 aa11.55□□□□□ -0.56
LINC00642-203ENST00000444942 TMEM57Q8N5G2 664 aa11.55□□□□□ -0.56
LINC00642-203ENST00000444942 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.55□□□□□ -0.56
LINC00642-203ENST00000444942 SLAIN1Q8ND83 568 aa11.55□□□□□ -0.56
LINC00642-203ENST00000444942 DIS3LQ8TF46 1054 aaKnown RBP11.55□□□□□ -0.56
LINC00642-203ENST00000444942 DEFB118Q96PH6 123 aa11.55□□□□□ -0.56
LINC00642-203ENST00000444942 MPHOSPH8Q99549 860 aa11.55□□□□□ -0.56
LINC00642-203ENST00000444942 ANKIB1Q9P2G1 1089 aa11.55□□□□□ -0.56
LINC00642-203ENST00000444942 CSF1RP07333 972 aa11.54□□□□□ -0.56
LINC00642-203ENST00000444942 CCDC57Q2TAC2 916 aa11.54□□□□□ -0.56
LINC00642-203ENST00000444942 NBPF12Q5TAG4 269 aaPredicted RBP11.54□□□□□ -0.56
LINC00642-203ENST00000444942 C17orf99Q6UX52 265 aa11.54□□□□□ -0.56
LINC00642-203ENST00000444942 FTSJ3Q8IY81 847 aaKnown RBP11.54□□□□□ -0.56
LINC00642-203ENST00000444942 MYLIPQ8WY64 445 aa11.54□□□□□ -0.56
LINC00642-203ENST00000444942 ARHGAP45Q92619 1136 aa11.54□□□□□ -0.56
LINC00642-203ENST00000444942 KAZALD1Q96I82 304 aa11.54□□□□□ -0.56
LINC00642-203ENST00000444942 CCDC136Q96JN2 1154 aa11.54□□□□□ -0.56
LINC00642-203ENST00000444942 MEIS3Q99687 375 aa11.54□□□□□ -0.56
LINC00642-203ENST00000444942 PAK6Q9NQU5 681 aaPredicted RBP11.54□□□□□ -0.56
LINC00642-203ENST00000444942 ZNF804BA4D1E1 1349 aa11.54□□□□□ -0.56
LINC00642-203ENST00000444942 ADGRA2Q96PE1 1338 aa11.54□□□□□ -0.56
LINC00642-203ENST00000444942 FMNL1O95466 1100 aaPredicted RBP11.54□□□□□ -0.56
LINC00642-203ENST00000444942 UBTFL1P0CB47 393 aaPredicted RBP11.54□□□□□ -0.56
LINC00642-203ENST00000444942 PANK1Q8TE04 598 aa11.54□□□□□ -0.56
LINC00642-203ENST00000444942 SEMA6BQ9H3T3 888 aa11.54□□□□□ -0.56
LINC00642-203ENST00000444942 UTYO14607 1347 aa11.53□□□□□ -0.56
LINC00642-203ENST00000444942 PRKCZQ05513 592 aa11.53□□□□□ -0.56
LINC00642-203ENST00000444942 STRIP1Q5VSL9 837 aa11.53□□□□□ -0.56
LINC00642-203ENST00000444942 ITPRIPQ8IWB1 547 aa11.53□□□□□ -0.56
LINC00642-203ENST00000444942 DZIP1LQ8IYY4 767 aaKnown RBP11.53□□□□□ -0.56
LINC00642-203ENST00000444942 ANKRD44Q8N8A2 993 aa11.53□□□□□ -0.56
LINC00642-203ENST00000444942 ANKLE1Q8NAG6 615 aa11.53□□□□□ -0.56
LINC00642-203ENST00000444942 KLHDC4Q8TBB5 520 aa11.53□□□□□ -0.56
LINC00642-203ENST00000444942 CNNM1Q9NRU3 951 aa11.53□□□□□ -0.56
LINC00642-203ENST00000444942 MINPP1Q9UNW1 487 aa11.53□□□□□ -0.56
LINC00642-203ENST00000444942 HCN4Q9Y3Q4 1203 aa11.53□□□□□ -0.56
LINC00642-203ENST00000444942 LRRFIP2Q9Y608 721 aaKnown RBP11.53□□□□□ -0.56
LINC00642-203ENST00000444942 BTBD19C9JJ37 291 aa11.52□□□□□ -0.57
LINC00642-203ENST00000444942 TAF5LO75529 589 aa11.52□□□□□ -0.57
LINC00642-203ENST00000444942 RLBP1P12271 317 aa11.52□□□□□ -0.57
LINC00642-203ENST00000444942 FOSL2P15408 326 aa11.52□□□□□ -0.57
LINC00642-203ENST00000444942 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.52□□□□□ -0.57
LINC00642-203ENST00000444942 C1QTNF1Q9BXJ1 281 aa11.52□□□□□ -0.57
LINC00642-203ENST00000444942 TSHZ2Q9NRE2 1034 aa11.52□□□□□ -0.57
LINC00642-203ENST00000444942 BSDC1Q9NW68 430 aaPredicted RBP11.52□□□□□ -0.57
LINC00642-203ENST00000444942 CPA4Q9UI42 421 aa11.52□□□□□ -0.57
LINC00642-203ENST00000444942 SNAP23O00161 211 aa11.51□□□□□ -0.57
LINC00642-203ENST00000444942 ADCY3O60266 1144 aa11.51□□□□□ -0.57
LINC00642-203ENST00000444942 INHAP05111 366 aa11.51□□□□□ -0.57
LINC00642-203ENST00000444942 CHRNDQ07001 517 aa11.51□□□□□ -0.57
LINC00642-203ENST00000444942 LDHAL6AQ6ZMR3 332 aa11.51□□□□□ -0.57
LINC00642-203ENST00000444942 ALYREFQ86V81 257 aaKnown RBP11.51□□□□□ -0.57
LINC00642-203ENST00000444942 KIAA0825Q8IV33 1275 aa11.51□□□□□ -0.57
LINC00642-203ENST00000444942 DOCK3Q8IZD9 2030 aa11.51□□□□□ -0.57
LINC00642-203ENST00000444942 EXOC6Q8TAG9 804 aa11.51□□□□□ -0.57
LINC00642-203ENST00000444942 PUS3Q9BZE2 481 aaKnown RBP11.51□□□□□ -0.57
LINC00642-203ENST00000444942 XDHP47989 1333 aa11.5□□□□□ -0.57
LINC00642-203ENST00000444942 CETPP11597 493 aa11.5□□□□□ -0.57
LINC00642-203ENST00000444942 KCNJ4P48050 445 aa11.5□□□□□ -0.57
LINC00642-203ENST00000444942 LRRC24Q50LG9 513 aa11.5□□□□□ -0.57
LINC00642-203ENST00000444942 FBXW7Q969H0 707 aa11.5□□□□□ -0.57
LINC00642-203ENST00000444942 NBPF3Q9H094 633 aa11.5□□□□□ -0.57
LINC00642-203ENST00000444942 C1orf115Q9H7X2 142 aa11.5□□□□□ -0.57
LINC00642-203ENST00000444942 MED23Q9ULK4 1368 aa11.5□□□□□ -0.57
LINC00642-203ENST00000444942 GNAI3P08754 354 aa11.49□□□□□ -0.57
LINC00642-203ENST00000444942 ELNP15502 786 aa11.49□□□□□ -0.57
LINC00642-203ENST00000444942 ATP2B4P23634 1241 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms