RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 GPR37L1O60883 481 aa13.29□□□□□ -0.28
HDAC8-215ENST00000444609 RIC3Q7Z5B4 369 aa13.29□□□□□ -0.28
HDAC8-215ENST00000444609 DZIP1LQ8IYY4 767 aaKnown RBP13.29□□□□□ -0.28
HDAC8-215ENST00000444609 JARID2Q92833 1246 aaPredicted RBP13.29□□□□□ -0.28
HDAC8-215ENST00000444609 CHPF2Q9P2E5 772 aa13.29□□□□□ -0.28
HDAC8-215ENST00000444609 SERPINA10Q9UK55 444 aa13.29□□□□□ -0.28
HDAC8-215ENST00000444609 ECM29Q5VYK3 1845 aa13.28□□□□□ -0.28
HDAC8-215ENST00000444609 CXCL11O14625 94 aa13.28□□□□□ -0.28
HDAC8-215ENST00000444609 IL1R1P14778 569 aa13.28□□□□□ -0.28
HDAC8-215ENST00000444609 INPP5BP32019 993 aa13.28□□□□□ -0.28
HDAC8-215ENST00000444609 MAP3K21Q5TCX8 1036 aa13.28□□□□□ -0.28
HDAC8-215ENST00000444609 HOOK2Q96ED9 719 aa13.28□□□□□ -0.28
HDAC8-215ENST00000444609 ANKRD2Q9GZV1 360 aa13.28□□□□□ -0.28
HDAC8-215ENST00000444609 C11orf16Q9NQ32 467 aa13.28□□□□□ -0.28
HDAC8-215ENST00000444609 GJD2Q9UKL4 321 aa13.28□□□□□ -0.28
HDAC8-215ENST00000444609 HSPA5P11021 654 aaKnown RBP13.27□□□□□ -0.29
HDAC8-215ENST00000444609 LHX8Q68G74 356 aa13.27□□□□□ -0.29
HDAC8-215ENST00000444609 ZNF576Q9H609 170 aa13.27□□□□□ -0.29
HDAC8-215ENST00000444609 MGAMO43451 1857 aa13.26□□□□□ -0.29
HDAC8-215ENST00000444609 CTSWP56202 376 aa13.26□□□□□ -0.29
HDAC8-215ENST00000444609 DCAF15Q66K64 600 aa13.26□□□□□ -0.29
HDAC8-215ENST00000444609 C15orf52Q6ZUT6 534 aaKnown RBP13.26□□□□□ -0.29
HDAC8-215ENST00000444609 CCDC191Q8NCU4 936 aa13.26□□□□□ -0.29
HDAC8-215ENST00000444609 TTLL11Q8NHH1 800 aa13.26□□□□□ -0.29
HDAC8-215ENST00000444609 GAS2L1Q99501 681 aaPredicted RBP13.26□□□□□ -0.29
HDAC8-215ENST00000444609 ZNF341Q9BYN7 854 aa13.26□□□□□ -0.29
HDAC8-215ENST00000444609 SENP6Q9GZR1 1112 aaPredicted RBP13.26□□□□□ -0.29
HDAC8-215ENST00000444609 GREM2Q9H772 168 aa13.26□□□□□ -0.29
HDAC8-215ENST00000444609 JAG2Q9Y219 1238 aa13.26□□□□□ -0.29
HDAC8-215ENST00000444609 SLC45A1Q9Y2W3 748 aa13.26□□□□□ -0.29
HDAC8-215ENST00000444609 PRKAR2AP13861 404 aaKnown RBP13.25□□□□□ -0.29
HDAC8-215ENST00000444609 FASTKD5Q7L8L6 764 aaKnown RBP13.25□□□□□ -0.29
HDAC8-215ENST00000444609 TRIB2Q92519 343 aa13.25□□□□□ -0.29
HDAC8-215ENST00000444609 BADQ92934 168 aa13.25□□□□□ -0.29
HDAC8-215ENST00000444609 BABAM1Q9NWV8 329 aa13.25□□□□□ -0.29
HDAC8-215ENST00000444609 ZNF112Q9UJU3 913 aa13.25□□□□□ -0.29
HDAC8-215ENST00000444609 TTF2Q9UNY4 1162 aaKnown RBP13.25□□□□□ -0.29
HDAC8-215ENST00000444609 DNAJB2P25686 324 aa13.24□□□□□ -0.29
HDAC8-215ENST00000444609 KCNJ4P48050 445 aa13.24□□□□□ -0.29
HDAC8-215ENST00000444609 MIGA2Q7L4E1 593 aa13.24□□□□□ -0.29
HDAC8-215ENST00000444609 ANKRD13CQ8N6S4 541 aa13.24□□□□□ -0.29
HDAC8-215ENST00000444609 SMCR8Q8TEV9 937 aaPredicted RBP13.24□□□□□ -0.29
HDAC8-215ENST00000444609 CXXC1Q9P0U4 656 aaPredicted RBP13.24□□□□□ -0.29
HDAC8-215ENST00000444609 IGHMBP2P38935 993 aaKnown RBP13.23□□□□□ -0.29
HDAC8-215ENST00000444609 CRKP46108 304 aa13.23□□□□□ -0.29
HDAC8-215ENST00000444609 ATN1P54259 1190 aaPredicted RBP13.23□□□□□ -0.29
HDAC8-215ENST00000444609 CACNB3P54284 484 aa13.23□□□□□ -0.29
HDAC8-215ENST00000444609 CNGB1Q14028 1251 aaPredicted RBP13.23□□□□□ -0.29
HDAC8-215ENST00000444609 CCDC85BQ15834 202 aaPredicted RBP13.23□□□□□ -0.29
HDAC8-215ENST00000444609 NFE2L2Q16236 605 aa13.23□□□□□ -0.29
HDAC8-215ENST00000444609 FAM83AQ86UY5 434 aa13.23□□□□□ -0.29
HDAC8-215ENST00000444609 CWC25Q9NXE8 425 aaPredicted RBP13.23□□□□□ -0.29
HDAC8-215ENST00000444609 DBF4Q9UBU7 674 aaPredicted RBP13.23□□□□□ -0.29
HDAC8-215ENST00000444609 A0A0G2JLL6 359 aaPredicted RBP13.22□□□□□ -0.29
HDAC8-215ENST00000444609 FAM86C2PA6NEL3 165 aa13.22□□□□□ -0.29
HDAC8-215ENST00000444609 SMIM22K7EJ46 135 aa13.22□□□□□ -0.29
HDAC8-215ENST00000444609 SNAP23O00161 211 aa13.22□□□□□ -0.29
HDAC8-215ENST00000444609 NEFMP07197 916 aa13.22□□□□□ -0.29
HDAC8-215ENST00000444609 RTP1P59025 263 aa13.22□□□□□ -0.29
HDAC8-215ENST00000444609 NHLH1Q02575 133 aa13.22□□□□□ -0.29
HDAC8-215ENST00000444609 FAM110CQ1W6H9 321 aa13.22□□□□□ -0.29
HDAC8-215ENST00000444609 NOL9Q5SY16 702 aaKnown RBP13.22□□□□□ -0.29
HDAC8-215ENST00000444609 ZNF804AQ7Z570 1209 aa13.22□□□□□ -0.29
HDAC8-215ENST00000444609 PRRT2Q7Z6L0 340 aaPredicted RBP13.22□□□□□ -0.29
HDAC8-215ENST00000444609 TIFAQ96CG3 184 aa13.22□□□□□ -0.29
HDAC8-215ENST00000444609 RNPC3Q96LT9 517 aaKnown RBP13.22□□□□□ -0.29
HDAC8-215ENST00000444609 MYD88Q99836 296 aa13.22□□□□□ -0.29
HDAC8-215ENST00000444609 HYPKQ9NX55 129 aa13.22□□□□□ -0.29
HDAC8-215ENST00000444609 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.21□□□□□ -0.29
HDAC8-215ENST00000444609 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.21□□□□□ -0.29
HDAC8-215ENST00000444609 FOXK2Q01167 660 aa13.21□□□□□ -0.29
HDAC8-215ENST00000444609 CHRNDQ07001 517 aa13.21□□□□□ -0.29
HDAC8-215ENST00000444609 ADGRE1Q14246 886 aa13.21□□□□□ -0.29
HDAC8-215ENST00000444609 KRT24Q2M2I5 525 aa13.21□□□□□ -0.29
HDAC8-215ENST00000444609 MFSD14BQ5SR56 506 aa13.21□□□□□ -0.29
HDAC8-215ENST00000444609 PRDM12Q9H4Q4 367 aa13.21□□□□□ -0.29
HDAC8-215ENST00000444609 ARAP2Q8WZ64 1704 aa13.2□□□□□ -0.3
HDAC8-215ENST00000444609 CCND3P30281 292 aaPredicted RBP13.2□□□□□ -0.3
HDAC8-215ENST00000444609 CACNB2Q08289 660 aaPredicted RBP13.2□□□□□ -0.3
HDAC8-215ENST00000444609 AAK1Q2M2I8 961 aa13.2□□□□□ -0.3
HDAC8-215ENST00000444609 HDGFL1Q5TGJ6 251 aa13.2□□□□□ -0.3
HDAC8-215ENST00000444609 FKBP1CQ5VVH2 108 aa13.2□□□□□ -0.3
HDAC8-215ENST00000444609 PLEKHF1Q96S99 279 aa13.2□□□□□ -0.3
HDAC8-215ENST00000444609 TSPYL2Q9H2G4 693 aaPredicted RBP13.2□□□□□ -0.3
HDAC8-215ENST00000444609 XRCC5P13010 732 aaKnown RBP13.19□□□□□ -0.3
HDAC8-215ENST00000444609 CYP2B6P20813 491 aa13.19□□□□□ -0.3
HDAC8-215ENST00000444609 TFF2Q03403 129 aa13.19□□□□□ -0.3
HDAC8-215ENST00000444609 GADL1Q6ZQY3 521 aa13.19□□□□□ -0.3
HDAC8-215ENST00000444609 KHSRPQ92945 711 aaKnown RBP eCLIP13.19□□□□□ -0.3
HDAC8-215ENST00000444609 MPHOSPH8Q99549 860 aa13.19□□□□□ -0.3
HDAC8-215ENST00000444609 PRDM5Q9NQX1 630 aaPredicted RBP13.19□□□□□ -0.3
HDAC8-215ENST00000444609 ATP11BQ9Y2G3 1177 aa13.19□□□□□ -0.3
HDAC8-215ENST00000444609 PI4K2BG5E9Z4 385 aa13.18□□□□□ -0.3
HDAC8-215ENST00000444609 KCNQ1P51787 676 aa13.18□□□□□ -0.3
HDAC8-215ENST00000444609 EPHB4P54760 987 aa13.18□□□□□ -0.3
HDAC8-215ENST00000444609 AFG3L2Q9Y4W6 797 aa13.18□□□□□ -0.3
HDAC8-215ENST00000444609 ZHX2Q9Y6X8 837 aa13.18□□□□□ -0.3
HDAC8-215ENST00000444609 XIRP2A4UGR9 3374 aa13.18□□□□□ -0.3
HDAC8-215ENST00000444609 DNAH12Q6ZR08 3092 aa13.17□□□□□ -0.3
HDAC8-215ENST00000444609 TAF5LO75529 589 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms