RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 ZIC5Q96T25 663 aa22.85■■□□□ 1.25
CCDC188-202ENST00000444532 TMEM39BQ9GZU3 492 aa22.85■■□□□ 1.25
CCDC188-202ENST00000444532 CCDC8Q9H0W5 538 aaPredicted RBP22.85■■□□□ 1.25
CCDC188-202ENST00000444532 DBNLQ9UJU6 430 aaKnown RBP22.85■■□□□ 1.25
CCDC188-202ENST00000444532 CA12O43570 354 aa22.84■■□□□ 1.25
CCDC188-202ENST00000444532 RAB11FIP3O75154 756 aa22.84■■□□□ 1.25
CCDC188-202ENST00000444532 RRP1P56182 461 aaKnown RBP22.84■■□□□ 1.25
CCDC188-202ENST00000444532 KIF23Q02241 960 aaPredicted RBP22.84■■□□□ 1.25
CCDC188-202ENST00000444532 KIF1BPQ96EK5 621 aa22.84■■□□□ 1.25
CCDC188-202ENST00000444532 AKAP11Q9UKA4 1901 aa22.84■■□□□ 1.25
CCDC188-202ENST00000444532 GAKO14976 1311 aa22.83■■□□□ 1.25
CCDC188-202ENST00000444532 IREB2P48200 963 aaKnown RBP22.83■■□□□ 1.25
CCDC188-202ENST00000444532 GSTO1P78417 241 aa22.83■■□□□ 1.25
CCDC188-202ENST00000444532 MECOMQ03112 1051 aa22.83■■□□□ 1.25
CCDC188-202ENST00000444532 HOOK2Q96ED9 719 aa22.83■■□□□ 1.25
CCDC188-202ENST00000444532 USP40Q9NVE5 1235 aa22.83■■□□□ 1.25
CCDC188-202ENST00000444532 FZD1Q9UP38 647 aa22.83■■□□□ 1.25
CCDC188-202ENST00000444532 USP2O75604 605 aaPredicted RBP22.82■■□□□ 1.24
CCDC188-202ENST00000444532 LDHCP07864 332 aa22.82■■□□□ 1.24
CCDC188-202ENST00000444532 TBC1D9Q6ZT07 1266 aa22.82■■□□□ 1.24
CCDC188-202ENST00000444532 AACSQ86V21 672 aa22.82■■□□□ 1.24
CCDC188-202ENST00000444532 TLR7Q9NYK1 1049 aaKnown RBP22.82■■□□□ 1.24
CCDC188-202ENST00000444532 IGSF3O75054 1194 aa22.81■■□□□ 1.24
CCDC188-202ENST00000444532 CLASRPQ8N2M8 674 aaKnown RBP22.81■■□□□ 1.24
CCDC188-202ENST00000444532 FAM151AQ8WW52 585 aa22.81■■□□□ 1.24
CCDC188-202ENST00000444532 SLC10A4Q96EP9 437 aa22.81■■□□□ 1.24
CCDC188-202ENST00000444532 IL1RAPL2Q9NP60 686 aa22.81■■□□□ 1.24
CCDC188-202ENST00000444532 PRDM10Q9NQV6 1147 aa22.81■■□□□ 1.24
CCDC188-202ENST00000444532 SNRKQ9NRH2 765 aa22.81■■□□□ 1.24
CCDC188-202ENST00000444532 RAI14Q9P0K7 980 aa22.81■■□□□ 1.24
CCDC188-202ENST00000444532 LRP2BPQ9P2M1 347 aa22.81■■□□□ 1.24
CCDC188-202ENST00000444532 MROH7-TTC4A0A0A0MT08 1334 aa22.81■■□□□ 1.24
CCDC188-202ENST00000444532 RPAP1Q9BWH6 1393 aaPredicted RBP22.8■■□□□ 1.24
CCDC188-202ENST00000444532 CDAN1Q8IWY9 1227 aa22.8■■□□□ 1.24
CCDC188-202ENST00000444532 NSUN4Q96CB9 384 aaKnown RBP22.8■■□□□ 1.24
CCDC188-202ENST00000444532 CSRNP1Q96S65 589 aa22.8■■□□□ 1.24
CCDC188-202ENST00000444532 GPR75-ASB3A0A0A6YYF3 556 aa22.79■■□□□ 1.24
CCDC188-202ENST00000444532 APBB1O00213 710 aa22.79■■□□□ 1.24
CCDC188-202ENST00000444532 CYP2E1P05181 493 aaPredicted RBP22.79■■□□□ 1.24
CCDC188-202ENST00000444532 HSPA8P11142 646 aaKnown RBP22.79■■□□□ 1.24
CCDC188-202ENST00000444532 COL13A1Q5TAT6 717 aaPredicted RBP22.79■■□□□ 1.24
CCDC188-202ENST00000444532 ANKRD13AQ8IZ07 590 aa22.79■■□□□ 1.24
CCDC188-202ENST00000444532 ZNF384Q8TF68 577 aa22.79■■□□□ 1.24
CCDC188-202ENST00000444532 MAP4K4O95819 1239 aaPredicted RBP22.78■■□□□ 1.24
CCDC188-202ENST00000444532 BTDP43251 543 aa22.78■■□□□ 1.24
CCDC188-202ENST00000444532 LBX1P52954 281 aa22.78■■□□□ 1.24
CCDC188-202ENST00000444532 IDI2Q9BXS1 227 aa22.78■■□□□ 1.24
CCDC188-202ENST00000444532 FAM198AQ9UFP1 575 aa22.78■■□□□ 1.24
CCDC188-202ENST00000444532 ZAP70P43403 619 aa22.77■■□□□ 1.24
CCDC188-202ENST00000444532 TCP10Q12799 353 aa22.77■■□□□ 1.24
CCDC188-202ENST00000444532 NFIAQ12857 509 aa22.77■■□□□ 1.24
CCDC188-202ENST00000444532 SPRYD7Q5W111 196 aa22.77■■□□□ 1.24
CCDC188-202ENST00000444532 CLMNQ96JQ2 1002 aa22.77■■□□□ 1.24
CCDC188-202ENST00000444532 SAGE1Q9NXZ1 904 aa22.77■■□□□ 1.24
CCDC188-202ENST00000444532 AK9Q5TCS8 1911 aa22.76■■□□□ 1.23
CCDC188-202ENST00000444532 ENTPD3O75355 529 aa22.76■■□□□ 1.23
CCDC188-202ENST00000444532 IFIT2P09913 472 aaKnown RBP22.76■■□□□ 1.23
CCDC188-202ENST00000444532 DCAF15Q66K64 600 aa22.76■■□□□ 1.23
CCDC188-202ENST00000444532 ZBTB48P10074 688 aaPredicted RBP22.75■■□□□ 1.23
CCDC188-202ENST00000444532 TM4SF4P48230 202 aa22.75■■□□□ 1.23
CCDC188-202ENST00000444532 MAP3K9P80192 1104 aa22.75■■□□□ 1.23
CCDC188-202ENST00000444532 NAA16Q6N069 864 aaPredicted RBP22.75■■□□□ 1.23
CCDC188-202ENST00000444532 OTOFQ9HC10 1997 aa22.75■■□□□ 1.23
CCDC188-202ENST00000444532 MAST2Q6P0Q8 1798 aa22.75■■□□□ 1.23
CCDC188-202ENST00000444532 MYO5AQ9Y4I1 1855 aaKnown RBP22.75■■□□□ 1.23
CCDC188-202ENST00000444532 RGS3P49796 1198 aa22.74■■□□□ 1.23
CCDC188-202ENST00000444532 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.74■■□□□ 1.23
CCDC188-202ENST00000444532 WNK4Q96J92 1243 aa22.74■■□□□ 1.23
CCDC188-202ENST00000444532 NOL10Q9BSC4 688 aaKnown RBP22.74■■□□□ 1.23
CCDC188-202ENST00000444532 LRRCC1Q9C099 1032 aa22.74■■□□□ 1.23
CCDC188-202ENST00000444532 NPM3O75607 178 aaKnown RBP22.73■■□□□ 1.23
CCDC188-202ENST00000444532 WDHD1O75717 1129 aaPredicted RBP22.73■■□□□ 1.23
CCDC188-202ENST00000444532 INHBEP58166 350 aa22.73■■□□□ 1.23
CCDC188-202ENST00000444532 RHBDL3P58872 404 aa22.73■■□□□ 1.23
CCDC188-202ENST00000444532 SREBF2Q12772 1141 aa22.73■■□□□ 1.23
CCDC188-202ENST00000444532 MKRN3Q13064 507 aaKnown RBP22.73■■□□□ 1.23
CCDC188-202ENST00000444532 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.73■■□□□ 1.23
CCDC188-202ENST00000444532 DCTPP1Q9H773 170 aa22.73■■□□□ 1.23
CCDC188-202ENST00000444532 PIH1D3Q9NQM4 214 aaKnown RBP22.73■■□□□ 1.23
CCDC188-202ENST00000444532 RNF186Q9NXI6 227 aa22.73■■□□□ 1.23
CCDC188-202ENST00000444532 CSADQ9Y600 493 aa22.73■■□□□ 1.23
CCDC188-202ENST00000444532 RFX7Q2KHR2 1363 aa22.73■■□□□ 1.23
CCDC188-202ENST00000444532 LAMB1P07942 1786 aa22.72■■□□□ 1.23
CCDC188-202ENST00000444532 ZFPM1Q8IX07 1006 aa22.72■■□□□ 1.23
CCDC188-202ENST00000444532 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.72■■□□□ 1.23
CCDC188-202ENST00000444532 ZNF341Q9BYN7 854 aa22.72■■□□□ 1.23
CCDC188-202ENST00000444532 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.72■■□□□ 1.23
CCDC188-202ENST00000444532 TSKSQ9UJT2 592 aa22.72■■□□□ 1.23
CCDC188-202ENST00000444532 MANSC4A6NHS7 340 aaPredicted RBP22.71■■□□□ 1.23
CCDC188-202ENST00000444532 TRPA1O75762 1119 aa22.71■■□□□ 1.23
CCDC188-202ENST00000444532 BAG3O95817 575 aa22.71■■□□□ 1.23
CCDC188-202ENST00000444532 PLCG2P16885 1265 aa22.71■■□□□ 1.23
CCDC188-202ENST00000444532 TMED8Q6PL24 325 aaPredicted RBP22.71■■□□□ 1.23
CCDC188-202ENST00000444532 MIGA2Q7L4E1 593 aa22.71■■□□□ 1.23
CCDC188-202ENST00000444532 ELP3Q9H9T3 547 aa22.71■■□□□ 1.23
CCDC188-202ENST00000444532 PPP4CP60510 307 aa22.7■■□□□ 1.22
CCDC188-202ENST00000444532 VGLL4Q14135 290 aa22.7■■□□□ 1.22
CCDC188-202ENST00000444532 TTF1Q15361 905 aaPredicted RBP22.7■■□□□ 1.22
CCDC188-202ENST00000444532 WRNIP1Q96S55 665 aa22.7■■□□□ 1.22
CCDC188-202ENST00000444532 CRBNQ96SW2 442 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms